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MS027336 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027336
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHEAT repeat-containing protein 6 isoform X1
Genome locationscaffold373:4335492..4335868
RNA-Seq ExpressionMS027336
SyntenyMS027336
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159607.1 HEAT repeat-containing protein 6 isoform X1 [Momordica charantia]1.6e-3796.74Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MATPSSSSASSVRSWRTAFLTLRDES+SSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPAS TAHDIAPVFADIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
XP_022159609.1 HEAT repeat-containing protein 6 isoform X2 [Momordica charantia]1.6e-3796.74Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MATPSSSSASSVRSWRTAFLTLRDES+SSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPAS TAHDIAPVFADIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
XP_022159610.1 HEAT repeat-containing protein 6 isoform X3 [Momordica charantia]1.6e-3796.74Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MATPSSSSASSVRSWRTAFLTLRDES+SSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPAS TAHDIAPVFADIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
XP_022957979.1 HEAT repeat-containing protein 6 isoform X1 [Cucurbita moschata]7.6e-3284.78Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MA PSSSSASSVRSWRTAFLTLRDESISSSTSIS+LL++TI SHSD LIAAAHYLPPPEVSSDLLFLLEVATPAS++ HD+A +F+DIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
XP_022957982.1 uncharacterized protein LOC111459349 isoform X4 [Cucurbita moschata]7.6e-3284.78Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MA PSSSSASSVRSWRTAFLTLRDESISSSTSIS+LL++TI SHSD LIAAAHYLPPPEVSSDLLFLLEVATPAS++ HD+A +F+DIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
TrEMBL top hitse value%identityAlignment
A0A6J1DZ80 HEAT repeat-containing protein 6 isoform X37.7e-3896.74Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MATPSSSSASSVRSWRTAFLTLRDES+SSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPAS TAHDIAPVFADIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
A0A6J1E0A2 HEAT repeat-containing protein 6 isoform X17.7e-3896.74Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MATPSSSSASSVRSWRTAFLTLRDES+SSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPAS TAHDIAPVFADIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
A0A6J1E2V4 HEAT repeat-containing protein 6 isoform X27.7e-3896.74Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MATPSSSSASSVRSWRTAFLTLRDES+SSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPAS TAHDIAPVFADIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
A0A6J1H262 HEAT repeat-containing protein 6 isoform X23.7e-3284.78Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MA PSSSSASSVRSWRTAFLTLRDESISSSTSIS+LL++TI SHSD LIAAAHYLPPPEVSSDLLFLLEVATPAS++ HD+A +F+DIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
A0A6J1H3P0 HEAT repeat-containing protein 6 isoform X13.7e-3284.78Show/hide
Query:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
        MA PSSSSASSVRSWRTAFLTLRDESISSSTSIS+LL++TI SHSD LIAAAHYLPPPEVSSDLLFLLEVATPAS++ HD+A +F+DIIHL+
Subjt:  MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38120.1 ARM repeat superfamily protein9.1e-0745.07Show/hide
Query:  SSSSASSVRSWRTAFLTLRDE-SISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPA
        +++++SSV  WRTAFL+LRDE S +    +  LL + + S S SLI+A  +LP  E++SD LFLL++ + A
Subjt:  SSSSASSVRSWRTAFLTLRDE-SISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPA
AT4G38120.2 ARM repeat superfamily protein9.1e-0745.07Show/hide
Query:  SSSSASSVRSWRTAFLTLRDE-SISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPA
        +++++SSV  WRTAFL+LRDE S +    +  LL + + S S SLI+A  +LP  E++SD LFLL++ + A
Subjt:  SSSSASSVRSWRTAFLTLRDE-SISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACACCGTCATCGTCATCAGCGTCTTCAGTAAGGTCATGGAGGACGGCGTTTCTGACTCTCCGAGACGAATCGATCTCGTCCTCAACCTCAATTTCCGAACTTCT
CCACAACACCATCCTCTCCCACTCCGATTCCTTAATCGCTGCCGCTCACTACCTTCCTCCTCCCGAAGTATCATCAGATCTGCTGTTTCTCCTTGAAGTGGCTACTCCTG
CTTCAAACACCGCGCATGACATTGCCCCCGTCTTCGCAGATATCATACATCTGGTGCAAATTACATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACACCGTCATCGTCATCAGCGTCTTCAGTAAGGTCATGGAGGACGGCGTTTCTGACTCTCCGAGACGAATCGATCTCGTCCTCAACCTCAATTTCCGAACTTCT
CCACAACACCATCCTCTCCCACTCCGATTCCTTAATCGCTGCCGCTCACTACCTTCCTCCTCCCGAAGTATCATCAGATCTGCTGTTTCTCCTTGAAGTGGCTACTCCTG
CTTCAAACACCGCGCATGACATTGCCCCCGTCTTCGCAGATATCATACATCTGGTGCAAATTACATTTTGA
Protein sequenceShow/hide protein sequence
MATPSSSSASSVRSWRTAFLTLRDESISSSTSISELLHNTILSHSDSLIAAAHYLPPPEVSSDLLFLLEVATPASNTAHDIAPVFADIIHLVQITF