; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027338 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027338
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine--tRNA ligase beta subunit
Genome locationscaffold373:4547377..4548045
RNA-Seq ExpressionMS027338
SyntenyMS027338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3448513.1 hypothetical protein FNV43_RR09226 [Rhamnella rubrinervis]1.5e-2245.88Show/hide
Query:  RAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNI
        RAE NPIV   R  K  G II RVT+ I AP+L+EPR +      +    A+  + ++ A V+  +W  QLVRAL +D+SRA D+P AP+R   E++ NI
Subjt:  RAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNI

Query:  EPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHV
        EPV +RDVEEV + ELVQ +F + V   +  L L++ + V GLA A   PVEVA  S P A    A VHV
Subjt:  EPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHV

KAF7810178.1 thaumatin-like protein 1 [Senna tora]1.4e-2343.35Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        A+HNPIVG   A +    II RV +  RAPLL+E  ++  P   +   A + ++ +H ARV+  S  P+L RAL VD + APD   A    R E + ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         + ERDVEE+ VV   Q V GQ V R AV L LEEA AV GLA A AG VE AV   P+   G A   V+ P +  V+LP+A    G P     VV D+E
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSC
          C
Subjt:  SSC

KAG6424917.1 hypothetical protein SASPL_115340 [Salvia splendens]1.3e-2142.13Show/hide
Query:  RAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNI
        RA+ + I G  RA + AG +I RV   + AP LE+PR I  PA    G AA+    E GARVVAA    +  RAL  DV RA D P APV    E++ ++
Subjt:  RAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNI

Query:  EPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADL
        E +   DV  V VVE V+ V   GV R AVGL +E   AVAG A AAA  VE AV + P+ G   A    + P +  V+ P  AR  G P+  G +V D 
Subjt:  EPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADL

Query:  ESSCMGAGRERENRKK
        E  CM    E +N+++
Subjt:  ESSCMGAGRERENRKK

RRT35184.1 hypothetical protein B296_00051088, partial [Ensete ventricosum]1.7e-2647.45Show/hide
Query:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL
        A  I+  + V + A +LEEP V+   AAA  G AAV V  EHGA VVAA+   Q   ALPVDV RAPDA AA  R   E++ ++E VD+ DVEEV+VV+L
Subjt:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL

Query:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGAGRERE
        V+   GQGV R+AV    + A AVA LA  AA PVE A  ++P+A +G + +HV+ P +  V+L SAA +  GP+    +V DLE   MG G ++E
Subjt:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGAGRERE

RWV93418.1 hypothetical protein GW17_00044119 [Ensete ventricosum]2.8e-2946.92Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        ++ NP+VG+  A + A  I+  + V + A  LEEP V+   AAA  G AAV V  EHGA VVAA+   Q   ALPVDV RAPDA AA  R   E++ ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         VD+ DVEEV+VV+LV+   GQGV R++V    + A AVA LA  AA PVE A  ++P+AG+G +RVHV+ P +  V+L SAA +  GP+     V DLE
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSCMGAGRERE
           M  G ++E
Subjt:  SSCMGAGRERE

TrEMBL top hitse value%identityAlignment
A0A0P0W106 Os03g0663600 protein3.4e-2042.08Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVI-RWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAP----DAPAAPVRSRTEI
        AE + +VG+ RAS+ A  ++  V V +RA  LEE RV+ R      R GAAV V  EH ARVVA +  PQL RALP  V  AP     AP A V    E+
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVI-RWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAP----DAPAAPVRSRTEI

Query:  NRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVK-LPSAARYSGGPNSEGT
        + ++E VDE DVEEV+V ELVQ    Q V R  V    + A AVA LA   A  VE A  + P+A +  A  HV+ P +  V+ LP+A R+   P+ +  
Subjt:  NRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVK-LPSAARYSGGPNSEGT

Query:  VVADLESSCMGAGRERENRKK
        +V D E   +  G E E R++
Subjt:  VVADLESSCMGAGRERENRKK

A0A426X6U9 Uncharacterized protein (Fragment)8.3e-2747.45Show/hide
Query:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL
        A  I+  + V + A +LEEP V+   AAA  G AAV V  EHGA VVAA+   Q   ALPVDV RAPDA AA  R   E++ ++E VD+ DVEEV+VV+L
Subjt:  AGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVEL

Query:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGAGRERE
        V+   GQGV R+AV    + A AVA LA  AA PVE A  ++P+A +G + +HV+ P +  V+L SAA +  GP+    +V DLE   MG G ++E
Subjt:  VQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGAGRERE

A0A444D5Q9 Uncharacterized protein1.4e-2946.92Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        ++ NP+VG+  A + A  I+  + V + A  LEEP V+   AAA  G AAV V  EHGA VVAA+   Q   ALPVDV RAPDA AA  R   E++ ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         VD+ DVEEV+VV+LV+   GQGV R++V    + A AVA LA  AA PVE A  ++P+AG+G +RVHV+ P +  V+L SAA +  GP+     V DLE
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSCMGAGRERE
           M  G ++E
Subjt:  SSCMGAGRERE

A0A444DXF2 Uncharacterized protein1.4e-2140.93Show/hide
Query:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE
        AE + +V +  AS+  G ++ RV V + A  LEE  V+  PAAA  G AAV V  EH A +VAA+  PQL  A P+DV RAPD  A P     E++ ++E
Subjt:  AEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIE

Query:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE
         VDE DVEEV+VV+LV     + V  +AV L  ++A AV GLA +    VE A  +SP+A +G    H+  P    VKL +A      P+ E   V DLE
Subjt:  PVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLE

Query:  SSCMGAGRERENRKK
            G G E    ++
Subjt:  SSCMGAGRERENRKK

A0A6A4LNT7 CASP-like protein (Fragment)3.7e-1944.65Show/hide
Query:  SWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGC
        +W  + +RALP+ +S A DA  A  RSR E + +IEP+ ER V++V+ VELVQ +F + V   A  L LE+ TAV GLA + A P+E+A  S P  GS C
Subjt:  SWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERDVEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGC

Query:  ARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGAGRE-----RENRKKEKK
        A   ++ P++  VK  +  R+ GGPNS GTVV D +S   GA  E     RE R+K +K
Subjt:  ARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGAGRE-----RENRKKEKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTAAGGGCAGAACACAACCCTATAGTTGGTTCCCCCAGGGCAAGTAAATGTGCTGGTTGCATCATCTTTAGGGTAACTGTATGCATCAGGGCACCGCTCCTTGA
AGAACCTCGAGTAATCCGTTGGCCCGCAGCTGCTATTCGGGGTGGTGCAGCAGTAGCGGTCGCCCCCGAACACGGTGCACGGGTTGTTGCAGCCTCCTGGAGCCCTCAGC
TCGTTCGGGCACTGCCCGTTGATGTCAGCCGTGCACCGGATGCCCCGGCTGCACCCGTTAGAAGTCGGACTGAAATCAATCGGAACATTGAACCCGTCGACGAGAGAGAT
GTCGAAGAAGTCCAAGTTGTTGAATTGGTTCAAGGCGTATTCGGCCAGGGTGTTTGGCGGAGTGCCGTAGGCTTGACACTGGAGGAGGCCACCGCAGTCGCCGGTTTGGC
ATCTGCCGCGGCCGGACCCGTCGAAGTTGCAGTTAGTTCGAGCCCAAATGCGGGCAGCGGCTGTGCCCGGGTTCACGTTGAATGTCCAAACGTCGTTTCGGTTAAGCTGC
CGTCCGCCGCCCGGTACAGCGGCGGCCCAAACAGTGAAGGGACAGTTGTTGCGGACTTGGAAAGTAGCTGCATGGGTGCGGGAAGAGAAAGAGAGAATAGAAAGAAAGAG
AAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTAAGGGCAGAACACAACCCTATAGTTGGTTCCCCCAGGGCAAGTAAATGTGCTGGTTGCATCATCTTTAGGGTAACTGTATGCATCAGGGCACCGCTCCTTGA
AGAACCTCGAGTAATCCGTTGGCCCGCAGCTGCTATTCGGGGTGGTGCAGCAGTAGCGGTCGCCCCCGAACACGGTGCACGGGTTGTTGCAGCCTCCTGGAGCCCTCAGC
TCGTTCGGGCACTGCCCGTTGATGTCAGCCGTGCACCGGATGCCCCGGCTGCACCCGTTAGAAGTCGGACTGAAATCAATCGGAACATTGAACCCGTCGACGAGAGAGAT
GTCGAAGAAGTCCAAGTTGTTGAATTGGTTCAAGGCGTATTCGGCCAGGGTGTTTGGCGGAGTGCCGTAGGCTTGACACTGGAGGAGGCCACCGCAGTCGCCGGTTTGGC
ATCTGCCGCGGCCGGACCCGTCGAAGTTGCAGTTAGTTCGAGCCCAAATGCGGGCAGCGGCTGTGCCCGGGTTCACGTTGAATGTCCAAACGTCGTTTCGGTTAAGCTGC
CGTCCGCCGCCCGGTACAGCGGCGGCCCAAACAGTGAAGGGACAGTTGTTGCGGACTTGGAAAGTAGCTGCATGGGTGCGGGAAGAGAAAGAGAGAATAGAAAGAAAGAG
AAGAAATAA
Protein sequenceShow/hide protein sequence
MVLRAEHNPIVGSPRASKCAGCIIFRVTVCIRAPLLEEPRVIRWPAAAIRGGAAVAVAPEHGARVVAASWSPQLVRALPVDVSRAPDAPAAPVRSRTEINRNIEPVDERD
VEEVQVVELVQGVFGQGVWRSAVGLTLEEATAVAGLASAAAGPVEVAVSSSPNAGSGCARVHVECPNVVSVKLPSAARYSGGPNSEGTVVADLESSCMGAGRERENRKKE
KK