; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027369 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027369
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold461:211785..214225
RNA-Seq ExpressionMS027369
SyntenyMS027369
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONK74450.1 uncharacterized protein A4U43_C03F6370 [Asparagus officinalis]8.5e-1051.58Show/hide
Query:  SSVQHQRRRAPLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEE
        S + H    APL EKLGI+ GP     T   SAA+   LEHGA +V     G  QLRRAL VD+ GA D  A S  RR E H ++EAVDEGDV E
Subjt:  SSVQHQRRRAPLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEE

RRT35184.1 hypothetical protein B296_00051088, partial [Ensete ventricosum]8.0e-0841.07Show/hide
Query:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ-
        A + E+ G++G      +     AA+  RLEHGAG+VAAA   R Q   ALPVD+  A DA+AA+ RR AE H ++EAVD+GDVEE+EV    E EL Q 
Subjt:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ-

Query:  --KASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTG--APAGE--TAAGRGR
          +A+V  R+      +A L LP+AA   G     GA    +     +   G   P  E  +AAG GR
Subjt:  --KASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTG--APAGE--TAAGRGR

RRT58306.1 hypothetical protein B296_00010408 [Ensete ventricosum]1.6e-0845.39Show/hide
Query:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQKA--SVGVRSWIDDPDMAALEL--
        AA+  RLEHGAG+VAAA   R Q   ALPVD+  A DA+AA+ RR AE H ++EAVD+GDVEE+EV    E EL Q    +  VR  +  P + A  L  
Subjt:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQKA--SVGVRSWIDDPDMAALEL--

Query:  ---PSAARHGGRSDCVGAVVQHSEDADGV--ETTGAPAGET
             AA HG    CV A V H  +  G+  +  G   GET
Subjt:  ---PSAARHGGRSDCVGAVVQHSEDADGV--ETTGAPAGET

RWV93418.1 hypothetical protein GW17_00044119 [Ensete ventricosum]1.2e-0642.86Show/hide
Query:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ---KASVGVRSWIDDPDMAALELP
        AA+  RLEHGAG+VAAA   R Q   ALPVD+  A DA+AA+ RR AE H ++EAVD+GDVEE+EV    E EL Q   +ASV  R+      +A L  P
Subjt:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ---KASVGVRSWIDDPDMAALELP

Query:  SAARHGGRSDCVGAVVQHSEDADGVETTG--APAGETAAGRGRAEGQKSVGVRV
        +AA   G     GA          V   G   P  E A+  G   G   V   V
Subjt:  SAARHGGRSDCVGAVVQHSEDADGVETTG--APAGETAAGRGRAEGQKSVGVRV

RWW02825.1 hypothetical protein GW17_00034063 [Ensete ventricosum]4.0e-0739.22Show/hide
Query:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQK
        A   E++G++G P          AA+  RLEH A IV  AAAGRPQLR A P+D+  A D +A      AE H ++EAVDEGDVEE+EV    + ELR+ 
Subjt:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQK

Query:  ASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTGAPAG
         +VG   W        L    AA   G +    A V+ +  A      G P G
Subjt:  ASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTGAPAG

TrEMBL top hitse value%identityAlignment
A0A426X6U9 Uncharacterized protein (Fragment)3.9e-0841.07Show/hide
Query:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ-
        A + E+ G++G      +     AA+  RLEHGAG+VAAA   R Q   ALPVD+  A DA+AA+ RR AE H ++EAVD+GDVEE+EV    E EL Q 
Subjt:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ-

Query:  --KASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTG--APAGE--TAAGRGR
          +A+V  R+      +A L LP+AA   G     GA    +     +   G   P  E  +AAG GR
Subjt:  --KASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTG--APAGE--TAAGRGR

A0A426Z2V8 Uncharacterized protein7.8e-0945.39Show/hide
Query:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQKA--SVGVRSWIDDPDMAALEL--
        AA+  RLEHGAG+VAAA   R Q   ALPVD+  A DA+AA+ RR AE H ++EAVD+GDVEE+EV    E EL Q    +  VR  +  P + A  L  
Subjt:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQKA--SVGVRSWIDDPDMAALEL--

Query:  ---PSAARHGGRSDCVGAVVQHSEDADGV--ETTGAPAGET
             AA HG    CV A V H  +  G+  +  G   GET
Subjt:  ---PSAARHGGRSDCVGAVVQHSEDADGV--ETTGAPAGET

A0A444D5Q9 Uncharacterized protein5.6e-0742.86Show/hide
Query:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ---KASVGVRSWIDDPDMAALELP
        AA+  RLEHGAG+VAAA   R Q   ALPVD+  A DA+AA+ RR AE H ++EAVD+GDVEE+EV    E EL Q   +ASV  R+      +A L  P
Subjt:  AAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQ---KASVGVRSWIDDPDMAALELP

Query:  SAARHGGRSDCVGAVVQHSEDADGVETTG--APAGETAAGRGRAEGQKSVGVRV
        +AA   G     GA          V   G   P  E A+  G   G   V   V
Subjt:  SAARHGGRSDCVGAVVQHSEDADGVETTG--APAGETAAGRGRAEGQKSVGVRV

A0A444DXF2 Uncharacterized protein1.9e-0739.22Show/hide
Query:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQK
        A   E++G++G P          AA+  RLEH A IV  AAAGRPQLR A P+D+  A D +A      AE H ++EAVDEGDVEE+EV    + ELR+ 
Subjt:  APLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIEVAG-AEFELRQK

Query:  ASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTGAPAG
         +VG   W        L    AA   G +    A V+ +  A      G P G
Subjt:  ASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTGAPAG

A0A5P1FD28 Uncharacterized protein4.1e-1051.58Show/hide
Query:  SSVQHQRRRAPLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEE
        S + H    APL EKLGI+ GP     T   SAA+   LEHGA +V     G  QLRRAL VD+ GA D  A S  RR E H ++EAVDEGDV E
Subjt:  SSVQHQRRRAPLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCGGTGTTTTTGGGTGTTGGTTCTACACCCTCTCCAGTGTGCAGCATCAGAGACGACGGGCACCTCTCTTTGAAAAACTTGGAATAATCGGTGGGCCCACATT
TTGTTGGAGAACTGTGGGTCCCAGTGCAGCAATATTCCGGCGTCTTGAACACGGCGCAGGGATTGTTGCAGCCGCCGCCGCCGGCCGCCCTCAGCTCCGCCGGGCACTCC
CTGTTGACATCGGCGGCGCAGGTGATGCCTCTGCTGCATCCGTTCGACGTCGGGCTGAATTCCATCAGAATATTGAAGCCGTCGACGAGGGAGATGTCGAAGAAATCGAA
GTTGCTGGTGCCGAGTTTGAACTCCGCCAAAAAGCGTCCGTTGGAGTTCGGAGTTGGATTGATGACCCAGACATGGCCGCTTTGGAGCTGCCGTCCGCCGCCCGGCACGG
CGGCCGCTCAGACTGTGTAGGGGCAGTTGTTCAGCATTCTGAAGACGCCGACGGAGTTGAAACGACGGGTGCACCGGCTGGAGAAACGGCTGCCGGTCGAGGGCGAGCCG
AAGGGCAGAAGAGCGTTGGCGTTAGGGTTAGGGTAGGTGTAGATCGGAGATTGAGCTACTATTGCAAAATTGAAATGGTTACTGAAACTGAAACTGAAATTGAAATTGAA
ATTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCGGTGTTTTTGGGTGTTGGTTCTACACCCTCTCCAGTGTGCAGCATCAGAGACGACGGGCACCTCTCTTTGAAAAACTTGGAATAATCGGTGGGCCCACATT
TTGTTGGAGAACTGTGGGTCCCAGTGCAGCAATATTCCGGCGTCTTGAACACGGCGCAGGGATTGTTGCAGCCGCCGCCGCCGGCCGCCCTCAGCTCCGCCGGGCACTCC
CTGTTGACATCGGCGGCGCAGGTGATGCCTCTGCTGCATCCGTTCGACGTCGGGCTGAATTCCATCAGAATATTGAAGCCGTCGACGAGGGAGATGTCGAAGAAATCGAA
GTTGCTGGTGCCGAGTTTGAACTCCGCCAAAAAGCGTCCGTTGGAGTTCGGAGTTGGATTGATGACCCAGACATGGCCGCTTTGGAGCTGCCGTCCGCCGCCCGGCACGG
CGGCCGCTCAGACTGTGTAGGGGCAGTTGTTCAGCATTCTGAAGACGCCGACGGAGTTGAAACGACGGGTGCACCGGCTGGAGAAACGGCTGCCGGTCGAGGGCGAGCCG
AAGGGCAGAAGAGCGTTGGCGTTAGGGTTAGGGTAGGTGTAGATCGGAGATTGAGCTACTATTGCAAAATTGAAATGGTTACTGAAACTGAAACTGAAATTGAAATTGAA
ATTGATTAG
Protein sequenceShow/hide protein sequence
MAIGVFGCWFYTLSSVQHQRRRAPLFEKLGIIGGPTFCWRTVGPSAAIFRRLEHGAGIVAAAAAGRPQLRRALPVDIGGAGDASAASVRRRAEFHQNIEAVDEGDVEEIE
VAGAEFELRQKASVGVRSWIDDPDMAALELPSAARHGGRSDCVGAVVQHSEDADGVETTGAPAGETAAGRGRAEGQKSVGVRVRVGVDRRLSYYCKIEMVTETETEIEIE
ID