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MS027400 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027400
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionxanthine dehydrogenase 1-like
Genome locationscaffold56:486542..488889
RNA-Seq ExpressionMS027400
SyntenyMS027400
Gene Ontology termsGO:0005506 - iron ion binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590207.1 Xanthine dehydrogenase 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1186.05Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIP D K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
XP_022154105.1 xanthine dehydrogenase 1-like [Momordica charantia]3.6e-1491.11Show/hide
Query:  NLEARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        +LEARKSAGFAGIFLAKDIPGD KFGPVIPDEELFASEFVTC+ Q
Subjt:  NLEARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
XP_022960725.1 xanthine dehydrogenase 1-like isoform X1 [Cucurbita moschata]1.3e-1186.05Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIP D K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
XP_022988000.1 xanthine dehydrogenase 1-like isoform X1 [Cucurbita maxima]2.6e-1288.37Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIPGD K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
XP_022988003.1 xanthine dehydrogenase 1-like isoform X2 [Cucurbita maxima]2.6e-1288.37Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIPGD K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
TrEMBL top hitse value%identityAlignment
A0A6J1DIP2 xanthine dehydrogenase 1-like1.8e-1491.11Show/hide
Query:  NLEARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        +LEARKSAGFAGIFLAKDIPGD KFGPVIPDEELFASEFVTC+ Q
Subjt:  NLEARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
A0A6J1H886 xanthine dehydrogenase 1-like isoform X26.3e-1286.05Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIP D K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
A0A6J1H9X6 xanthine dehydrogenase 1-like isoform X16.3e-1286.05Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIP D K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
A0A6J1JID1 xanthine dehydrogenase 1-like isoform X11.3e-1288.37Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIPGD K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
A0A6J1JL04 xanthine dehydrogenase 1-like isoform X21.3e-1288.37Show/hide
Query:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        EARKSAGFAGIFLAKDIPGD K GP IPDEELFASEFVTC+ Q
Subjt:  EARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
SwissProt top hitse value%identityAlignment
F4JLI5 Xanthine dehydrogenase 24.8e-0957.14Show/hide
Query:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        A+ S+GF G+FLAKD+PG+   GP++ DEELFA++ VTC+ Q
Subjt:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
Q6AUV1 Xanthine dehydrogenase1.8e-0861.9Show/hide
Query:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        A+ S GFAG+FL+KD+PG    GPVI DEE+FAS+ VTC+ Q
Subjt:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
Q8GUQ8 Xanthine dehydrogenase 11.1e-1064.29Show/hide
Query:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        A+ S+GF G+FLAKDIPGD   GP++PDEELFA++ VTC+ Q
Subjt:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
Arabidopsis top hitse value%identityAlignment
AT4G34890.1 xanthine dehydrogenase 18.1e-1264.29Show/hide
Query:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        A+ S+GF G+FLAKDIPGD   GP++PDEELFA++ VTC+ Q
Subjt:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
AT4G34900.1 xanthine dehydrogenase 23.4e-1057.14Show/hide
Query:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ
        A+ S+GF G+FLAKD+PG+   GP++ DEELFA++ VTC+ Q
Subjt:  ARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGGAACTTGGAAGCTAGGAAATCTGCTGGTTTTGCTGGCATCTTCCTGGCCAAAGACATCCCAGGTGATTATAAGTTTGGGCCAGTTATTCCTGATGAGGAACT
TTTTGCTTCAGAATTTGTCACTTGCATGGCTCAGTACAAGTCGAAGCCCGGAATGGCCCCTGTCGGCCTTGAGCCTTTCTCAATTGATGATCATGGTGTTTATTTCAATG
GAGGCCTCTATTGGATGGAAGAAGATTCTTCATGGGCTAAAGCATTTGTTGTTGCTATACCAGAAAAATTGTATTGTACTCCTCTTGATGGCTTCCAACTCATCAAACTC
TGTGAAGATGGGAAGATCTTGTGTCTTGTTGTTGGATTTCATTTAATCTTGTATGACTCAGCCACTGAGAGGAAGAGGTTGAAATTAAGGAACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTGGAACTTGGAAGCTAGGAAATCTGCTGGTTTTGCTGGCATCTTCCTGGCCAAAGACATCCCAGGTGATTATAAGTTTGGGCCAGTTATTCCTGATGAGGAACT
TTTTGCTTCAGAATTTGTCACTTGCATGGCTCAGTACAAGTCGAAGCCCGGAATGGCCCCTGTCGGCCTTGAGCCTTTCTCAATTGATGATCATGGTGTTTATTTCAATG
GAGGCCTCTATTGGATGGAAGAAGATTCTTCATGGGCTAAAGCATTTGTTGTTGCTATACCAGAAAAATTGTATTGTACTCCTCTTGATGGCTTCCAACTCATCAAACTC
TGTGAAGATGGGAAGATCTTGTGTCTTGTTGTTGGATTTCATTTAATCTTGTATGACTCAGCCACTGAGAGGAAGAGGTTGAAATTAAGGAACATTTAG
Protein sequenceShow/hide protein sequence
MIWNLEARKSAGFAGIFLAKDIPGDYKFGPVIPDEELFASEFVTCMAQYKSKPGMAPVGLEPFSIDDHGVYFNGGLYWMEEDSSWAKAFVVAIPEKLYCTPLDGFQLIKL
CEDGKILCLVVGFHLILYDSATERKRLKLRNI