; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027424 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027424
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhapless 8
Genome locationscaffold23:141343..143031
RNA-Seq ExpressionMS027424
SyntenyMS027424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597651.1 hypothetical protein SDJN03_10831, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4456.99Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        ++P DEN  QN  K FSIRQYTLSCR KN+F CWPFP KYL+LC +HGVSN+LPP+ PP  V+QSSE   SI+  K DNK +PI ++      TE +  +
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ
            SSGI S DVS++M  P+      TT HSCLD++K+ I S  CSRM +KNDR RKGK+KKR MVDILAVAKPCS++D+Y M +
Subjt:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ

KAG7029091.1 hypothetical protein SDJN02_10275 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4456.99Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        ++P DEN  QN  K FSIRQYTLSCR KN+F CWPFP KYL+LC +HGVSN+LPP+ PP  V+QSSE   SI+  K DNK +PI ++      TE +  +
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ
            SSGI S DVS++M  P+      TT HSCLD++K+ I S  CSRM +KNDR RKGK+KKR MVDILAVAKPCS++D+Y M +
Subjt:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ

XP_022145235.1 uncharacterized protein LOC111014738 [Momordica charantia]5.6e-7978.76Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        MSP DENQ QN PKLFSIRQYTLSCR KNLFHCWPFPVKYLLLCL HGV+NILPPLD PP V+QSSEH+RSI+C +KDNK NPI VNDEGPDITE+SAGK
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYN------SSGIMSPDVSYNMSCPKRQA-SAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ
        RSYN      SSGIMS DVS NM CP+RQA S PTTLHSCLD+DK  IRS  CSRM +KNDRSRKGK+KKRWMVDILAVAKPCS++DLY M +
Subjt:  RSYN------SSGIMSPDVSYNMSCPKRQA-SAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ

XP_022972113.1 uncharacterized protein LOC111470745 [Cucurbita maxima]2.0e-4457.61Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        ++P DEN  QN  K FSIRQYTLSCR KN+F CWPFP KYLLLC +HGV+N+LPP+ PP  V+QSSE   SI+  K DNK +PI +       TE +  +
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM
            SSGI S DVS++M  P+      TT HSCLD++K+ I S  CSRM +KNDR RKGK+KKR MVDILAVAKPCS++D+Y M
Subjt:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM

XP_023539065.1 uncharacterized protein LOC111799818 [Cucurbita pepo subsp. pepo]2.0e-4457.61Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        ++P DEN  QN  K FSIRQYTLSCR KN+F CWPFP KYLLLC +HGV+++LPP+ PP  V+QSSE   SI+  K DNK NPI +       TE +  +
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM
            SSGI S DVS++M  P+      TT HSCLD++K+ I S  CSRM +KNDR RKGK+KKR MVDILAVAKPCS++D+Y M
Subjt:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM

TrEMBL top hitse value%identityAlignment
A0A6J1CW12 uncharacterized protein LOC1110147382.7e-7978.76Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        MSP DENQ QN PKLFSIRQYTLSCR KNLFHCWPFPVKYLLLCL HGV+NILPPLD PP V+QSSEH+RSI+C +KDNK NPI VNDEGPDITE+SAGK
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYN------SSGIMSPDVSYNMSCPKRQA-SAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ
        RSYN      SSGIMS DVS NM CP+RQA S PTTLHSCLD+DK  IRS  CSRM +KNDRSRKGK+KKRWMVDILAVAKPCS++DLY M +
Subjt:  RSYN------SSGIMSPDVSYNMSCPKRQA-SAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQ

A0A6J1F2X5 uncharacterized protein LOC1114391854.8e-4457.07Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        ++P DEN   N  K FSIRQYTLSCR KN+F CWPFP KYLLLC +HGV+N+LPP+ PP  V+QSSE   SI+  K DNK +PI ++      TE +  +
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM
            SSGI S DVS++M  P+      TT HSCLD++K+ I S  CSRM +KNDR RKGK+KKR MVDILAVAKPCS++D+Y M
Subjt:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM

A0A6J1I8Y1 uncharacterized protein LOC1114707459.7e-4557.61Show/hide
Query:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK
        ++P DEN  QN  K FSIRQYTLSCR KN+F CWPFP KYLLLC +HGV+N+LPP+ PP  V+QSSE   SI+  K DNK +PI +       TE +  +
Subjt:  MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGK

Query:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM
            SSGI S DVS++M  P+      TT HSCLD++K+ I S  CSRM +KNDR RKGK+KKR MVDILAVAKPCS++D+Y M
Subjt:  RSYNSSGIMSPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTM

A0A6P3ZYF6 uncharacterized protein LOC1074222313.2e-1935.78Show/hide
Query:  NQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQS-------------SEHIRSINCTKKD----NKGNPIAVNDE
        N ++++   FSIR+Y L+CR K++FH WPFP KYL +CL+HG++++LPPL+     +QS             S  I+ +  T +      K + +A N++
Subjt:  NQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQS-------------SEHIRSINCTKKD----NKGNPIAVNDE

Query:  -GPDITEDSAGKRSYNS-----SGI-MSPDVSYNMSCPKRQASA--PTTL---HSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCS
           + ++D     S NS     +G  +S DV+ ++   + + SA  P +L   H C  I K        ++ML+   + RKGK KKR MVDILAVAKPC+
Subjt:  -GPDITEDSAGKRSYNS-----SGI-MSPDVSYNMSCPKRQASA--PTTL---HSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCS

Query:  IQDL
        ++DL
Subjt:  IQDL

A0A7N2LXV2 Uncharacterized protein4.0e-2234.13Show/hide
Query:  PDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGKR--
        P+ + +Q D K FSIR+Y L+ R K++F  WPFP KYL +C +HG+SN+LPPL+P   V+QS         +K+DNK    +++++ PD  E     +  
Subjt:  PDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGKR--

Query:  --SYNSSGIM---------------------SPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSI
          SY++  I                      + +++ +   P+ + S  TT+HS    D +  +    S+ ++   +  KGK KKR MVDILAVAK CS 
Subjt:  --SYNSSGIM---------------------SPDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSI

Query:  QDLYTMKQ
        ++LY + Q
Subjt:  QDLYTMKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56250.1 hapless 86.5e-0926.51Show/hide
Query:  QNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDE--------------------
        Q+    FSIR Y  S R KN+   WPF    L LCL HG+++ LPP+ PP     +  H+ +++  +K  K     +  E                    
Subjt:  QNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDE--------------------

Query:  ----------------GPDITEDSAGKRSYNSSGIMSPDVSYNMSCP--KRQASAPTT-----LHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWM
                         P    DS GK  ++S    S  ++   +CP  K  +SA  T     +  CL +D  Q        + K N    K + K + M
Subjt:  ----------------GPDITEDSAGKRSYNSSGIMSPDVSYNMSCP--KRQASAPTT-----LHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWM

Query:  VDILAVAKPCSIQDL
         DI A AK  +++DL
Subjt:  VDILAVAKPCSIQDL

AT5G56250.2 hapless 86.5e-0926.51Show/hide
Query:  QNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDE--------------------
        Q+    FSIR Y  S R KN+   WPF    L LCL HG+++ LPP+ PP     +  H+ +++  +K  K     +  E                    
Subjt:  QNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDE--------------------

Query:  ----------------GPDITEDSAGKRSYNSSGIMSPDVSYNMSCP--KRQASAPTT-----LHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWM
                         P    DS GK  ++S    S  ++   +CP  K  +SA  T     +  CL +D  Q        + K N    K + K + M
Subjt:  ----------------GPDITEDSAGKRSYNSSGIMSPDVSYNMSCP--KRQASAPTT-----LHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWM

Query:  VDILAVAKPCSIQDL
         DI A AK  +++DL
Subjt:  VDILAVAKPCSIQDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCACCCGACGAAAATCAACTACAGAATGATCCGAAACTTTTCTCAATAAGACAGTACACACTTTCTTGTCGTCACAAGAACTTATTTCATTGCTGGCCATTTCC
AGTCAAGTATCTGCTTCTATGTCTGCGCCATGGTGTTAGCAATATTTTGCCACCACTCGATCCCCCTCCCCGTGTCGTTCAGTCATCCGAACATATCCGCTCGATCAATT
GTACGAAGAAAGACAACAAAGGTAATCCCATTGCTGTAAATGATGAAGGGCCAGACATCACAGAGGATTCAGCTGGCAAAAGATCATATAATTCATCAGGAATTATGTCC
CCTGATGTTTCTTATAATATGTCATGTCCTAAACGACAAGCTTCGGCTCCTACAACTCTGCATTCATGTCTAGATATCGATAAACGGCAAATTCGGTCATCATATTGCTC
GAGAATGTTGAAGAAAAATGACAGAAGTCGAAAAGGGAAGCGAAAGAAACGGTGGATGGTGGATATTTTGGCTGTGGCAAAGCCTTGTAGTATTCAGGATCTCTATACAA
TGAAACAGAGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCACCCGACGAAAATCAACTACAGAATGATCCGAAACTTTTCTCAATAAGACAGTACACACTTTCTTGTCGTCACAAGAACTTATTTCATTGCTGGCCATTTCC
AGTCAAGTATCTGCTTCTATGTCTGCGCCATGGTGTTAGCAATATTTTGCCACCACTCGATCCCCCTCCCCGTGTCGTTCAGTCATCCGAACATATCCGCTCGATCAATT
GTACGAAGAAAGACAACAAAGGTAATCCCATTGCTGTAAATGATGAAGGGCCAGACATCACAGAGGATTCAGCTGGCAAAAGATCATATAATTCATCAGGAATTATGTCC
CCTGATGTTTCTTATAATATGTCATGTCCTAAACGACAAGCTTCGGCTCCTACAACTCTGCATTCATGTCTAGATATCGATAAACGGCAAATTCGGTCATCATATTGCTC
GAGAATGTTGAAGAAAAATGACAGAAGTCGAAAAGGGAAGCGAAAGAAACGGTGGATGGTGGATATTTTGGCTGTGGCAAAGCCTTGTAGTATTCAGGATCTCTATACAA
TGAAACAGAGAGAGTGA
Protein sequenceShow/hide protein sequence
MSPPDENQLQNDPKLFSIRQYTLSCRHKNLFHCWPFPVKYLLLCLRHGVSNILPPLDPPPRVVQSSEHIRSINCTKKDNKGNPIAVNDEGPDITEDSAGKRSYNSSGIMS
PDVSYNMSCPKRQASAPTTLHSCLDIDKRQIRSSYCSRMLKKNDRSRKGKRKKRWMVDILAVAKPCSIQDLYTMKQRE