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MS027477 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027477
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: putative disease resistance protein RGA3
Genome locationscaffold898:25610..27982
RNA-Seq ExpressionMS027477
SyntenyMS027477
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR041118 - Rx, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646395.1 hypothetical protein Csa_016171 [Cucumis sativus]8.6e-2575.79Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM
        MAEAILFQVAGEILMKL SQA  RLGM   ++ DL KLT+T+STIKDVLLDAE RQTKSH LQNWL KLEEALYDAEDVLDELS   E L+  +M
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM

XP_022147051.1 putative disease resistance protein RGA4 [Momordica charantia]1.8e-2279.07Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEER-QTKS-HSLQNWLQKLEEALYDAEDVLDELS
        MAE +LF VAGEILMKL S AS RLGM R VE+DLTKLTST+S IK+VLLDAEE  QTK+ H+LQ+WLQKLEEALYDAEDVLDELS
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEER-QTKS-HSLQNWLQKLEEALYDAEDVLDELS

XP_022154436.1 LOW QUALITY PROTEIN: putative disease resistance protein RGA3 [Momordica charantia]1.6e-34100Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS
        MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS

XP_031745107.1 putative disease resistance protein RGA4 [Cucumis sativus]8.6e-2575.79Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM
        MAEAILFQVAGEILMKL SQA  RLGM   ++ DL KLT+T+STIKDVLLDAE RQTKSH LQNWL KLEEALYDAEDVLDELS   E L+  +M
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM

XP_038897566.1 putative disease resistance protein RGA4 [Benincasa hispida]4.3e-2473.68Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM
        MAEAILF +AGEILMKL SQA  RLGM   ++D+L KLT+T+STIKDVLLDAE RQTK H L+NWLQKLEEALYDAEDVLDELS   E L   VM
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM

TrEMBL top hitse value%identityAlignment
A0A0A0K603 Rx_N domain-containing protein4.2e-2575.79Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM
        MAEAILFQVAGEILMKL SQA  RLGM   ++ DL KLT+T+STIKDVLLDAE RQTKSH LQNWL KLEEALYDAEDVLDELS   E L+  +M
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVM

A0A6J1D168 putative disease resistance protein RGA48.7e-2379.07Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEER-QTKS-HSLQNWLQKLEEALYDAEDVLDELS
        MAE +LF VAGEILMKL S AS RLGM R VE+DLTKLTST+S IK+VLLDAEE  QTK+ H+LQ+WLQKLEEALYDAEDVLDELS
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEER-QTKS-HSLQNWLQKLEEALYDAEDVLDELS

A0A6J1DHT2 putative disease resistance protein RGA41.5e-1963.74Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLK
        MAE +L  VAG ILMKL S  S  +GM   +EDDLTKLT+T+S IK+VL+DAEE QTK+H+LQNWLQKLEE  YD ED+LDE S  +E L+
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLK

A0A6J1DNQ4 LOW QUALITY PROTEIN: putative disease resistance protein RGA37.6e-35100Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS
        MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS

A0A6J1DP92 putative disease resistance protein RGA41.6e-2170.24Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS
        MAE ILF VAGEILMKL S+AS +LGM   +++DLTKLT+++STIK +LLDAEERQTKSHS+++WL+KL+EALYDA+DVL+E S
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELS

SwissProt top hitse value%identityAlignment
Q7XA39 Putative disease resistance protein RGA41.4e-0642.86Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSE---RFE
        MAEA L QV   +L  L S    +L +    E +  KL+S  STI+ VL DA+E+Q K  +++NWLQKL  A Y+ +D+L E      RFE
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSE---RFE

Q7XA40 Putative disease resistance protein RGA31.2e-0542.68Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDE
        MAEA L QV   +L  L       LG+    E +  KL+S  S I+ VL DA+E+Q K  +++NWLQKL  A Y+ +D+LD+
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDE

Q7XA42 Putative disease resistance protein RGA14.2e-0639.02Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDE
        MAEA +  V   +   L  +     G     +D+  +L+S  STI+ VL DA+E+Q     L+NWLQKL  A Y+ +D+LDE
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDE

Q7XBQ9 Disease resistance protein RGA21.4e-0649.02Show/hide
Query:  EDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDE
        +D+  +L+S  STI+ VL DA+E+Q  +  L+NWLQKL  A Y+ +D+LDE
Subjt:  EDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDE

Q9SX38 Putative disease resistance protein At1g501808.7e-0428.85Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIEIVE
        MAEAI+     ++   L+ +     G+G    D + +L   +  +   L DA+E+Q +S  ++NW+  + EA YDAED+L+    + E  K   M  ++ 
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIEIVE

Query:  GSHC
           C
Subjt:  GSHC

Arabidopsis top hitse value%identityAlignment
AT1G50180.1 NB-ARC domain-containing disease resistance protein6.2e-0528.85Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIEIVE
        MAEAI+     ++   L+ +     G+G    D + +L   +  +   L DA+E+Q +S  ++NW+  + EA YDAED+L+    + E  K   M  ++ 
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIEIVE

Query:  GSHC
           C
Subjt:  GSHC

AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein8.9e-0430.61Show/hide
Query:  MAEAILFQVAGEILMKL-ISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIE
        MA + L   A  ++ ++  SQ    L  G+     L +L   + T   VL DA++R      +++WL  +++A + AED+LDEL  + E L+  V+ E
Subjt:  MAEAILFQVAGEILMKL-ISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIE

AT3G14470.1 NB-ARC domain-containing disease resistance protein1.1e-0428.57Show/hide
Query:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDD-LTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIE
        + E  L      +   L+S+        RE+ ++ L +L++ + TI  VL+DAEE+Q  +  ++ W+ +L + +Y AED LD+++   E L+ ++  E
Subjt:  MAEAILFQVAGEILMKLISQASTRLGMGREVEDD-LTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAGCAATTCTGTTCCAAGTTGCTGGTGAGATCTTGATGAAGCTGATCTCTCAAGCTTCCACTCGGCTTGGAATGGGGCGTGAAGTGGAGGATGATCTTACCAA
ACTCACCAGCACCATCTCAACTATTAAGGATGTACTTCTTGACGCGGAGGAGCGTCAAACTAAAAGTCACTCCCTACAGAATTGGCTCCAAAAGCTAGAAGAAGCTCTTT
ATGATGCGGAGGATGTGCTTGATGAACTCTCCGAACGGTTTGAATGTTTGAAATACCATGTGATGATTGAGATTGTTGAAGGCAGCCATTGCCATTCATCAAAATTCTTT
GATATAAGGGAAGTTCCTTGGACTTGGACTCATTCTGTGACTGACCCAGCCAAGCTCCTTGAGAACACCCTGGTCAATTCCCTGGAATATTGGGCGACTTCCAACAGATT
GTTCACCTCAAAGTTGTCCATTGAATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAAGCAATTCTGTTCCAAGTTGCTGGTGAGATCTTGATGAAGCTGATCTCTCAAGCTTCCACTCGGCTTGGAATGGGGCGTGAAGTGGAGGATGATCTTACCAA
ACTCACCAGCACCATCTCAACTATTAAGGATGTACTTCTTGACGCGGAGGAGCGTCAAACTAAAAGTCACTCCCTACAGAATTGGCTCCAAAAGCTAGAAGAAGCTCTTT
ATGATGCGGAGGATGTGCTTGATGAACTCTCCGAACGGTTTGAATGTTTGAAATACCATGTGATGATTGAGATTGTTGAAGGCAGCCATTGCCATTCATCAAAATTCTTT
GATATAAGGGAAGTTCCTTGGACTTGGACTCATTCTGTGACTGACCCAGCCAAGCTCCTTGAGAACACCCTGGTCAATTCCCTGGAATATTGGGCGACTTCCAACAGATT
GTTCACCTCAAAGTTGTCCATTGAATTCTGA
Protein sequenceShow/hide protein sequence
MAEAILFQVAGEILMKLISQASTRLGMGREVEDDLTKLTSTISTIKDVLLDAEERQTKSHSLQNWLQKLEEALYDAEDVLDELSERFECLKYHVMIEIVEGSHCHSSKFF
DIREVPWTWTHSVTDPAKLLENTLVNSLEYWATSNRLFTSKLSIEF