; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027538 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027538
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBHLH domain-containing protein
Genome locationscaffold313:362359..364084
RNA-Seq ExpressionMS027538
SyntenyMS027538
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602034.1 putative transcription factor basic helix-loop-helix 86, partial [Cucurbita argyrosperma subsp. sororia]6.2e-9070.71Show/hide
Query:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQG-SQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQ
        MALANS+V E DGM       K++ +ATH+ PN+  +FRN  +YQLDHH    Q   QSLINFKCGID++ HK    NNESLLSFEP    QDT++W D 
Subjt:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQG-SQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQ

Query:  QQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAA
         QRLM+DPNC FQTATN YS  K+N         N   SVY+WLYSE  S VSDAI EAE A E+ANQKR  M ESSG V KK+CT+A  KKQKPKSS  
Subjt:  QQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAA

Query:  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAID ILSSQRERSSSS S+K
Subjt:  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

XP_022141631.1 putative transcription factor bHLH086 [Momordica charantia]2.2e-14899.65Show/hide
Query:  MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQDTFHWVDQQQRLMDDPNCSFQ
        MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLD HHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQDTFHWVDQQQRLMDDPNCSFQ
Subjt:  MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQDTFHWVDQQQRLMDDPNCSFQ

Query:  TATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRE
        TATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRE
Subjt:  TATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRE

Query:  RISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        RISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
Subjt:  RISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

XP_022963447.1 putative transcription factor bHLH086 [Cucurbita moschata]1.1e-8970Show/hide
Query:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQGSQ----SLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHW
        MALANS+V E DGM       K++ +ATH+ PN+  +FRN  +YQLDHH    Q  Q    SLINFKCGID++ HK    NNESLLSFEP    QDT++W
Subjt:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQGSQ----SLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHW

Query:  VDQQQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKS
         D  QRLM+DPNC FQTATN YS  K+N         N   SVY+WLYSE  S VSDAI EAE A E+ANQKR  M ESSG V KK+CT+A  KKQKPKS
Subjt:  VDQQQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKS

Query:  SAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        S  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAID ILSSQRERSSSS S+K
Subjt:  SAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

XP_022990966.1 putative transcription factor bHLH086 [Cucurbita maxima]1.6e-9071.38Show/hide
Query:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQG-SQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQ
        MALANS+V E DGM       K+L +ATH+ PN+  +FRN  +YQLDHH    Q   QSLINFKCGIDN+ HK    NNESLLSFEP    QDT++W D 
Subjt:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQG-SQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQ

Query:  QQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAA
         QRLM+DPNC FQTATN YS  K+N         N   SVY+WLYSE T  VSD I EAE A EIANQKR  M ESSG V KK+CT+A  KKQKPKSS  
Subjt:  QQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAA

Query:  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAID ILSSQRERSSSS S+K
Subjt:  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

XP_023528222.1 putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo]2.5e-9171.28Show/hide
Query:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQQ
        MALANS+V E DGM       K++ +ATH+ PN+  +FRN  +YQLDHH    Q  QSLINFKCGIDN+ HK    NNESLLSFEP    QDT++W D  
Subjt:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQQ

Query:  QRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAA
        QRLM+DPNC FQTATN YS  K+N         N   SVY+WLYSE  S VSDAI EAE A EIANQKR  M ESSG V KK+CT+   KKQKPKSS  A
Subjt:  QRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAA

Query:  KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAID ILSSQRERSSSS S+K
Subjt:  KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

TrEMBL top hitse value%identityAlignment
A0A0A0KN55 BHLH domain-containing protein2.4e-7966.67Show/hide
Query:  MALANSAVQEVDGM--------KTLAMA---THENPNSNSVFRN-PSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQD------TF
        MALANSA+QEVDGM        K+LA+     H+NPN + VFR+  +YQL       Q  QSLINF           +  NNESLLSFE Q       T+
Subjt:  MALANSAVQEVDGM--------KTLAMA---THENPNSNSVFRN-PSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQD------TF

Query:  HWVDQQQRLMDDPNCSFQTAT---NYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIA-NQKRSLMV-ESSGGVCKKRCTSATTK
        +W D QQR+M+DPNC FQTAT   NYSPSKD++     + + D  SVYEWLYSE T+  SD+I EAE  QEI  N KRS    ESSG VCKK+CT+A  K
Subjt:  HWVDQQQRLMDDPNCSFQTAT---NYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIA-NQKRSLMV-ESSGGVCKKRCTSATTK

Query:  KQKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSS
        KQKPK SA AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAIDVILSSQRERSS
Subjt:  KQKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSS

Query:  SSISEK
        SS SEK
Subjt:  SSISEK

A0A1S3CCR8 putative transcription factor bHLH0864.2e-7664.92Show/hide
Query:  MALANSAVQEVDGM--------KTLAMAT--HENPNSNSVFRN-PSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQD------TFH
        M+LANSA+QEVDGM        K+LA+     +NPN + VFR+  +YQL       Q  QSLINF           +  NNESLLSFE Q       T++
Subjt:  MALANSAVQEVDGM--------KTLAMAT--HENPNSNSVFRN-PSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQD------TFH

Query:  WVDQQQRLMDDPNCSFQTAT---NYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIA-NQKRSLMV-ESSGGVCKKRCTSATTKK
        W D Q+R+M+DPNC FQTAT   NYSPSKD++    G++     SVYEWLY E T+  SD+I +AE  QEI  N KRS    ESSG VCKK+CT+A  KK
Subjt:  WVDQQQRLMDDPNCSFQTAT---NYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIA-NQKRSLMV-ESSGGVCKKRCTSATTKK

Query:  QKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSS
        QKPK SA AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAIDVILSSQRERSSS
Subjt:  QKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSS

Query:  SISEK
        S +EK
Subjt:  SISEK

A0A6J1CJS8 putative transcription factor bHLH0861.1e-14899.65Show/hide
Query:  MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQDTFHWVDQQQRLMDDPNCSFQ
        MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLD HHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQDTFHWVDQQQRLMDDPNCSFQ
Subjt:  MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQDTFHWVDQQQRLMDDPNCSFQ

Query:  TATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRE
        TATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRE
Subjt:  TATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRE

Query:  RISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        RISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
Subjt:  RISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

A0A6J1HFA4 putative transcription factor bHLH0865.1e-9070Show/hide
Query:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQGSQ----SLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHW
        MALANS+V E DGM       K++ +ATH+ PN+  +FRN  +YQLDHH    Q  Q    SLINFKCGID++ HK    NNESLLSFEP    QDT++W
Subjt:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQGSQ----SLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHW

Query:  VDQQQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKS
         D  QRLM+DPNC FQTATN YS  K+N         N   SVY+WLYSE  S VSDAI EAE A E+ANQKR  M ESSG V KK+CT+A  KKQKPKS
Subjt:  VDQQQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKS

Query:  SAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        S  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAID ILSSQRERSSSS S+K
Subjt:  SAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

A0A6J1JPE9 putative transcription factor bHLH0867.9e-9171.38Show/hide
Query:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQG-SQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQ
        MALANS+V E DGM       K+L +ATH+ PN+  +FRN  +YQLDHH    Q   QSLINFKCGIDN+ HK    NNESLLSFEP    QDT++W D 
Subjt:  MALANSAVQEVDGM-------KTLAMATHENPNSNSVFRN-PSYQLDHHHHHHQG-SQSLINFKCGIDNLLHKNNNNNNESLLSFEP----QDTFHWVDQ

Query:  QQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAA
         QRLM+DPNC FQTATN YS  K+N         N   SVY+WLYSE T  VSD I EAE A EIANQKR  M ESSG V KK+CT+A  KKQKPKSS  
Subjt:  QQRLMDDPNCSFQTATN-YSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAA

Query:  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK
        AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGK PDISQVKEAID ILSSQRERSSSS S+K
Subjt:  AKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK

SwissProt top hitse value%identityAlignment
Q2QQ32 Transcription factor BHLH1331.2e-1647.62Show/hide
Query:  AAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKS---SAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILA
        A +     KR + +++   +   R     TK    K+   S +A+  QS  AKNRR+RI+ERL+ILQEL+PNG+KVD+ TMLE+AI YVKFL LQ+K+L+
Subjt:  AAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKS---SAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILA

Query:  TDEFW
        +DE W
Subjt:  TDEFW

Q7XHI9 Transcription factor bHLH841.9e-1766.67Show/hide
Query:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        S  AA DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW

Q84WK0 Transcription factor RSL22.5e-1766.67Show/hide
Query:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        S  AA DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW

Q9C707 Transcription factor RHD64.3e-4164.52Show/hide
Query:  EWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK
        +WLYS+ T   + + +E+ + +   N KRS   ES+     K+ +S  T K KPK + + KDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEK
Subjt:  EWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK

Query:  AISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVIL-SSQRERSSSSIS
        AISYVKFLQ+QVK+LATDEFWP QGGK PDISQVK+AID IL SSQR+R+S+ I+
Subjt:  AISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVIL-SSQRERSSSSIS

Q9FJ00 Putative transcription factor bHLH0863.3e-4154.04Show/hide
Query:  HWVDQ-QQRLMDDPNCSFQTATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKP
        H VD    R++  PN SF+T +++  +  N+ +    NH +G    +WLYS  T     + HE+  + ++A  KR    E++     K+ +S T  K KP
Subjt:  HWVDQ-QQRLMDDPNCSFQTATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKP

Query:  KSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSS
        K++ + KDPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWP QGGK PDISQVKEAID ILSS +  S+S+
Subjt:  KSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSS

Arabidopsis top hitse value%identityAlignment
AT1G27740.1 root hair defective 6-like 44.4e-1758.44Show/hide
Query:  SATTKKQKPKSS-AAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        S T+ K K +++   A DPQS+ A+ RRE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  SATTKKQKPKSS-AAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW

AT1G66470.1 ROOT HAIR DEFECTIVE63.0e-4264.52Show/hide
Query:  EWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK
        +WLYS+ T   + + +E+ + +   N KRS   ES+     K+ +S  T K KPK + + KDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEK
Subjt:  EWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEK

Query:  AISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVIL-SSQRERSSSSIS
        AISYVKFLQ+QVK+LATDEFWP QGGK PDISQVK+AID IL SSQR+R+S+ I+
Subjt:  AISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVIL-SSQRERSSSSIS

AT2G14760.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-1866.67Show/hide
Query:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        S  AA DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW

AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 21.8e-1866.67Show/hide
Query:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW
        S  AA DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Subjt:  SSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW

AT5G37800.1 RHD SIX-LIKE 12.3e-4254.04Show/hide
Query:  HWVDQ-QQRLMDDPNCSFQTATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKP
        H VD    R++  PN SF+T +++  +  N+ +    NH +G    +WLYS  T     + HE+  + ++A  KR    E++     K+ +S T  K KP
Subjt:  HWVDQ-QQRLMDDPNCSFQTATNYSPSKDNNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKP

Query:  KSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSS
        K++ + KDPQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWP QGGK PDISQVKEAID ILSS +  S+S+
Subjt:  KSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTCGCAAACTCAGCTGTACAAGAAGTCGATGGCATGAAGACTTTAGCCATGGCAACCCATGAGAATCCAAATAGTAACTCGGTCTTTCGAAACCCGAGTTACCA
ACTCGATCATCATCATCATCACCACCAGGGATCTCAATCTCTCATCAACTTCAAGTGTGGGATTGACAATCTTCTCCACAAGAATAATAATAACAACAACGAATCCTTGC
TGAGCTTTGAGCCACAAGACACCTTCCATTGGGTTGATCAGCAGCAGCGTTTGATGGACGATCCCAATTGCAGCTTCCAAACAGCTACAAACTACAGCCCTTCAAAAGAC
AATAATAAAACTGCAGCTGGAGATAATCATAATGATGGCAGCTCAGTGTATGAATGGCTTTATTCTGAACCAACTTCTTCTGTTTCTGATGCCATTCATGAGGCTGAAGC
AGCTCAAGAGATAGCCAATCAAAAGCGATCTCTTATGGTAGAGAGCAGTGGGGGTGTTTGTAAGAAGCGATGTACTAGTGCAACAACTAAGAAACAGAAACCCAAATCAT
CTGCAGCAGCCAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTCCAAGAATTGGTTCCCAATGGCTCCAAGGTTGAT
TTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAGCTACAAGTGAAGATCCTGGCGACGGATGAATTTTGGCCAGTTCAAGGTGGGAAAGTTCCTGA
TATTTCCCAAGTTAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGGGAAAGAAGCTCAAGCTCAATCAGTGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTCGCAAACTCAGCTGTACAAGAAGTCGATGGCATGAAGACTTTAGCCATGGCAACCCATGAGAATCCAAATAGTAACTCGGTCTTTCGAAACCCGAGTTACCA
ACTCGATCATCATCATCATCACCACCAGGGATCTCAATCTCTCATCAACTTCAAGTGTGGGATTGACAATCTTCTCCACAAGAATAATAATAACAACAACGAATCCTTGC
TGAGCTTTGAGCCACAAGACACCTTCCATTGGGTTGATCAGCAGCAGCGTTTGATGGACGATCCCAATTGCAGCTTCCAAACAGCTACAAACTACAGCCCTTCAAAAGAC
AATAATAAAACTGCAGCTGGAGATAATCATAATGATGGCAGCTCAGTGTATGAATGGCTTTATTCTGAACCAACTTCTTCTGTTTCTGATGCCATTCATGAGGCTGAAGC
AGCTCAAGAGATAGCCAATCAAAAGCGATCTCTTATGGTAGAGAGCAGTGGGGGTGTTTGTAAGAAGCGATGTACTAGTGCAACAACTAAGAAACAGAAACCCAAATCAT
CTGCAGCAGCCAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTCCAAGAATTGGTTCCCAATGGCTCCAAGGTTGAT
TTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTCAAATTTCTTCAGCTACAAGTGAAGATCCTGGCGACGGATGAATTTTGGCCAGTTCAAGGTGGGAAAGTTCCTGA
TATTTCCCAAGTTAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGGGAAAGAAGCTCAAGCTCAATCAGTGAAAAGTGA
Protein sequenceShow/hide protein sequence
MALANSAVQEVDGMKTLAMATHENPNSNSVFRNPSYQLDHHHHHHQGSQSLINFKCGIDNLLHKNNNNNNESLLSFEPQDTFHWVDQQQRLMDDPNCSFQTATNYSPSKD
NNKTAAGDNHNDGSSVYEWLYSEPTSSVSDAIHEAEAAQEIANQKRSLMVESSGGVCKKRCTSATTKKQKPKSSAAAKDPQSIAAKNRRERISERLKILQELVPNGSKVD
LVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKVPDISQVKEAIDVILSSQRERSSSSISEK