CuGenDBv2

Gene ID	MS027559
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein COP1 SUPPRESSOR 2-like isoform X2
Genome location	scaffold313:1717943..1718347
RNA-Seq Expression	MS027559
Synteny	MS027559
Gene Ontology terms	NA
InterPro domains	IPR010756 - Telomere length and silencing protein 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579146.1 Protein COP1 SUPPRESSOR 2, partial [Cucurbita argyrosperma subsp. sororia]

6.6e-50

84.33

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSK+KNFRKRN  DTEDGGDGANS +T+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD N+K GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

KAG7016665.1 putative protein C9orf78 [Cucurbita argyrosperma subsp. argyrosperma]

6.6e-50

84.33

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSK+KNFRKRN  DTEDGGDGANS +T+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD N+K GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

XP_022146355.1 uncharacterized protein C9orf78 homolog [Momordica charantia]

4.2e-60

99.25

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTS AGAGAGAGAGGGLVRKTTDTNNKAGGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

XP_022938620.1 protein COP1 SUPPRESSOR 2-like isoform X1 [Cucurbita moschata]

6.6e-50

84.33

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSK+KNFRKRN  DTEDGGDGANS +T+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD N+K GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

XP_022938621.1 protein COP1 SUPPRESSOR 2-like isoform X2 [Cucurbita moschata]

6.6e-50

84.33

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSK+KNFRKRN  DTEDGGDGANS +T+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD N+K GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CX27 uncharacterized protein C9orf78 homolog

2.0e-60

99.25

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTS AGAGAGAGAGGGLVRKTTDTNNKAGGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

A0A6J1FDN4 protein COP1 SUPPRESSOR 2-like isoform X2

3.2e-50

84.33

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSK+KNFRKRN  DTEDGGDGANS +T+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD N+K GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

A0A6J1FKA0 protein COP1 SUPPRESSOR 2-like isoform X1

3.2e-50

84.33

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSK+KNFRKRN  DTEDGGDGANS +T+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD N+K GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

A0A6J1K0C9 protein COP1 SUPPRESSOR 2-like isoform X2

9.4e-50

85.07

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSKKKNFRKRN  D EDG DGANS ST+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD NNK GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

A0A6J1K2G2 protein COP1 SUPPRESSOR 2-like isoform X1

9.4e-50

85.07

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Query:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG
        MNQQSKKKNFRKRN  D EDG DGANS ST+SEEEEEEHRMALEEVKFLQKQRERRAGIPA+P+V+MQTST GA   +G GGGLVRK+TD NNK GGGGG
Subjt:  MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGG

Query:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM
        +KNES GGEGDKDDLVLQDTFAQETAVMVEDPNM
Subjt:  NKNESGGGEGDKDDLVLQDTFAQETAVMVEDPNM

SwissProt top hits

e value

%identity

Alignment

F4HVZ5 Protein COP1 SUPPRESSOR 2

3.6e-14

45.31

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Query:  KKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGGNKNESG
        K+NFRKR++ + E+  D  N  +    EEEE+ R+ALEEVKFLQK RER+ GIPA+ + T Q+S            G V+    T               
Subjt:  KKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGGNKNESG

Query:  GGEGDKDDLVLQDTFAQETAVMVEDPNM
          EG+K++LVLQDTFAQETAV++EDPNM
Subjt:  GGEGDKDDLVLQDTFAQETAVMVEDPNM

Arabidopsis top hits

e value

%identity

Alignment

AT1G02330.1 CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).

2.5e-15

45.31

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Query:  KKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGGNKNESG
        K+NFRKR++ + E+  D  N  +    EEEE+ R+ALEEVKFLQK RER+ GIPA+ + T Q+S            G V+    T               
Subjt:  KKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGGNKNESG

Query:  GGEGDKDDLVLQDTFAQETAVMVEDPNM
          EG+K++LVLQDTFAQETAV++EDPNM
Subjt:  GGEGDKDDLVLQDTFAQETAVMVEDPNM

Sequences

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CDS sequence

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ATGAATCAACAGTCGAAGAAGAAGAATTTCCGGAAAAGGAATTATAGTGATACAGAAGATGGGGGAGATGGGGCAAACTCCGTTAGTACCAGATCGGAGGAGGAAGAAGA
AGAGCACAGGATGGCATTGGAGGAGGTAAAATTCTTACAGAAACAGAGGGAGAGGAGGGCCGGAATTCCTGCAGTTCCCGCGGTGACGATGCAGACCAGCACCGCCGGTG
CTGGTGCCGGCGCCGGCGCCGGCGGAGGTCTTGTTAGGAAAACCACGGACACTAACAATAAAGCTGGTGGCGGCGGGGGCAACAAAAATGAAAGCGGTGGAGGCGAGGGC
GACAAGGATGATTTGGTCCTTCAGGATACTTTCGCTCAGGAAACTGCTGTCATGGTTGAAGATCCAAATATGTAG

mRNA sequence

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Protein sequence

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MNQQSKKKNFRKRNYSDTEDGGDGANSVSTRSEEEEEEHRMALEEVKFLQKQRERRAGIPAVPAVTMQTSTAGAGAGAGAGGGLVRKTTDTNNKAGGGGGNKNESGGGEG
DKDDLVLQDTFAQETAVMVEDPNM

MS027559 (gene) of Bitter gourd (TR) v1 genome