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MS027615 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027615
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionvegetative cell wall protein gp1-like
Genome locationscaffold20:637562..637867
RNA-Seq ExpressionMS027615
SyntenyMS027615
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]6.2e-2490.48Show/hide
Query:  MENKNDPKWDNELKSEIIDWGRPARDVTGQPKERPNVGAENEESDWRRTNRAERARSRPLLGP
        MENKNDPK D ELKSEIIDWGRPARDVTG+PKERPN GA+NEESDWRRTNRAERARSRP+LGP
Subjt:  MENKNDPKWDNELKSEIIDWGRPARDVTGQPKERPNVGAENEESDWRRTNRAERARSRPLLGP
XP_026285374.1 vegetative cell wall protein gp1-like [Frankliniella occidentalis]4.2e-0459.57Show/hide
Query:  ARSRPLLGPDHCSVPTPARSRSLLGLDHFSVPTTSRSRPLLGPRPSP
        AR RPLL  D CS PTPAR R LL  D  S PT +R RP L P P+P
Subjt:  ARSRPLLGPDHCSVPTPARSRSLLGLDHFSVPTTSRSRPLLGPRPSP
TrEMBL top hitse value%identityAlignment
A0A6J1DPJ5 uncharacterized protein LOC1110230163.0e-2490.48Show/hide
Query:  MENKNDPKWDNELKSEIIDWGRPARDVTGQPKERPNVGAENEESDWRRTNRAERARSRPLLGP
        MENKNDPK D ELKSEIIDWGRPARDVTG+PKERPN GA+NEESDWRRTNRAERARSRP+LGP
Subjt:  MENKNDPKWDNELKSEIIDWGRPARDVTGQPKERPNVGAENEESDWRRTNRAERARSRPLLGP
A0A6J1SVS1 vegetative cell wall protein gp1-like2.0e-0459.57Show/hide
Query:  ARSRPLLGPDHCSVPTPARSRSLLGLDHFSVPTTSRSRPLLGPRPSP
        AR RPLL  D CS PTPAR R LL  D  S PT +R RP L P P+P
Subjt:  ARSRPLLGPDHCSVPTPARSRSLLGLDHFSVPTTSRSRPLLGPRPSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAAAAACGACCCGAAATGGGACAATGAGTTGAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCAGCCCAAAGAACGACCTAACGT
CGGGGCAGAGAACGAGGAAAGCGACTGGCGGAGAACTAACCGGGCCGAGAGGGCTCGGTCCCGACCCCTTCTCGGTCCCGACCACTGCTCGGTCCCGACCCCTGCTCGGT
CCCGATCCCTGCTCGGTCTCGACCACTTCTCGGTCCCAACCACTTCTCGGTCCCGACCCTTGCTCGGCCCACGGCCCAGCCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAAAAACGACCCGAAATGGGACAATGAGTTGAAGTCTGAGATCATTGATTGGGGGAGACCGGCCCGTGACGTAACGGGCCAGCCCAAAGAACGACCTAACGT
CGGGGCAGAGAACGAGGAAAGCGACTGGCGGAGAACTAACCGGGCCGAGAGGGCTCGGTCCCGACCCCTTCTCGGTCCCGACCACTGCTCGGTCCCGACCCCTGCTCGGT
CCCGATCCCTGCTCGGTCTCGACCACTTCTCGGTCCCAACCACTTCTCGGTCCCGACCCTTGCTCGGCCCACGGCCCAGCCCATGA
Protein sequenceShow/hide protein sequence
MENKNDPKWDNELKSEIIDWGRPARDVTGQPKERPNVGAENEESDWRRTNRAERARSRPLLGPDHCSVPTPARSRSLLGLDHFSVPTTSRSRPLLGPRPSP