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MS027623 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027623
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDehydrogenase, E1 component, Thiamine diphosphate-binding fold protein
Genome locationscaffold20:1748522..1748980
RNA-Seq ExpressionMS027623
SyntenyMS027623
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG0538669.1 hypothetical protein BDA96_03G256400 [Sorghum bicolor]7.6e-1056.72Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGTPIPTAIAGTITAG
        MMRRP   R +YT AP+GHS T A   A NPSVGPTTLHRHGLL VPH    GT    + +    AG
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGTPIPTAIAGTITAG

KAG6507272.1 hypothetical protein ZIOFF_032614 [Zingiber officinale]1.1e-1169.64Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGTPI
        M+RRPF  R +YT APTGHST AAAA A+NP+VGPTTLHRHGLL  PHS   G  I
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGTPI

PKU71704.1 hypothetical protein MA16_Dca022802 [Dendrobium catenatum]3.1e-1179.17Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPH
        MMRRPF CRK YT AP GHSTTAA A A+ P+VGPTTLHRHGLL VPH
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPH

PNT72485.1 hypothetical protein BRADI_2g45053v3 [Brachypodium distachyon]5.8e-1066.67Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT
        MMRRP   R +YT AP+GHSTT     A NPSVGPTTLHRHGLL VPH    GT
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT

RCV26405.1 hypothetical protein SETIT_5G242400v2 [Setaria italica]4.0e-1168.52Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT
        MMRRP  CR +YT AP+GHS T A  KA NPSVGP+TLHRHGLL VPH    GT
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT

TrEMBL top hitse value%identityAlignment
A0A287L6F3 Uncharacterized protein2.2e-1071.15Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQI
        MMRRP   RK+YT AP+GHSTT A   A NPSVGPTTL RHGLL VPH  QI
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQI

A0A2I0W7R5 Uncharacterized protein1.5e-1179.17Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPH
        MMRRPF CRK YT AP GHSTTAA A A+ P+VGPTTLHRHGLL VPH
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPH

A0A2K2DDW4 Uncharacterized protein2.8e-1066.67Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT
        MMRRP   R +YT AP+GHSTT     A NPSVGPTTLHRHGLL VPH    GT
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT

A0A453F4K6 Uncharacterized protein1.4e-1274.07Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT
        MMRRP   RK+YT AP+GHSTT A   A NPSVGPTTLHRHGLL VPH  QIGT
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT

K3XNZ6 Uncharacterized protein2.0e-1168.52Show/hide
Query:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT
        MMRRP  CR +YT AP+GHS T A  KA NPSVGP+TLHRHGLL VPH    GT
Subjt:  MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGGCGGCCCTTCGCGTGCCGGAAGCAGTACACCAGAGCTCCGACCGGCCACTCCACCACCGCCGCCGCCGCGAAAGCCAAGAATCCCAGCGTCGGCCCCACCAC
CTTGCACCGGCACGGGTTGCTGTGGGTTCCACATTCAATGCAGATCGGAACGCCGATTCCAACGGCCATCGCTGGGACAATTACCGCCGGGCCACGACGGAGAACACAAT
TCTCGCCGACTATTTCGATTCCTGCAGAAGGAAGGAAGCTCGGATTTAGGGCTTCGGAAATTTGGGGTTTAATTTTGTCAAGGGCGAAGTTTCAAGAATTTAAAGGACTT
TTTTTCGTGTACGTGGCGGCACGAGAAGGGTTTGCGTGGACACGTGTCCGAAAATGGGAGAGTGGTACAGGTGTCTTGGTATTACTGCGGAAGATCAATAGAGCTTCGGG
AAGCGACGTCGTTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCGGCGGCCCTTCGCGTGCCGGAAGCAGTACACCAGAGCTCCGACCGGCCACTCCACCACCGCCGCCGCCGCGAAAGCCAAGAATCCCAGCGTCGGCCCCACCAC
CTTGCACCGGCACGGGTTGCTGTGGGTTCCACATTCAATGCAGATCGGAACGCCGATTCCAACGGCCATCGCTGGGACAATTACCGCCGGGCCACGACGGAGAACACAAT
TCTCGCCGACTATTTCGATTCCTGCAGAAGGAAGGAAGCTCGGATTTAGGGCTTCGGAAATTTGGGGTTTAATTTTGTCAAGGGCGAAGTTTCAAGAATTTAAAGGACTT
TTTTTCGTGTACGTGGCGGCACGAGAAGGGTTTGCGTGGACACGTGTCCGAAAATGGGAGAGTGGTACAGGTGTCTTGGTATTACTGCGGAAGATCAATAGAGCTTCGGG
AAGCGACGTCGTTTCATAA
Protein sequenceShow/hide protein sequence
MMRRPFACRKQYTRAPTGHSTTAAAAKAKNPSVGPTTLHRHGLLWVPHSMQIGTPIPTAIAGTITAGPRRRTQFSPTISIPAEGRKLGFRASEIWGLILSRAKFQEFKGL
FFVYVAAREGFAWTRVRKWESGTGVLVLLRKINRASGSDVVS