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MS027634 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027634
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLipid transfer protein
Genome locationscaffold20:2496627..2496887
RNA-Seq ExpressionMS027634
SyntenyMS027634
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG1334709.1 Type 2 nonspecific lipid transfer protein LTP203 [Cocos nucifera]1.3e-1452.56Show/hide
Query:  VLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        +L+ +T  A A TCDP+EL+ PCA A LFS PPS  CCAKLK  +PC+C+Y  +PSL  YINS  +R +   C  +IP
Subjt:  VLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

OMP04713.1 hypothetical protein COLO4_09369 [Corchorus olitorius]4.5e-1553.75Show/hide
Query:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        + V +  TH A A TC   ELT PCA A++   PPS  CC KLKE EPC+C+YL DPSLK YIN+  A+ IA  C  T P
Subjt:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

PIM99915.1 hypothetical protein CDL12_27585 [Handroanthus impetiginosus]3.8e-1450.62Show/hide
Query:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        + VL++   +AAAV C P EL+ PC  A   SQPPS  CC KL+E  PC C YL DP+L+ Y+NS GAR +A  C    PT
Subjt:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT

RWW05707.1 hypothetical protein GW17_00031004 [Ensete ventricosum]6.4e-1448.15Show/hide
Query:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        +A+L+ R+  A +VTC+P EL+  CASA L + PP+  CCAKLKE  PC+C+Y  +P+L+ YINS  ++ +A+ C   IPT
Subjt:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT

XP_022143311.1 non-specific lipid-transfer protein 2P-like [Momordica charantia]1.2e-1557.97Show/hide
Query:  CDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPTVAS
        C+P+EL  PC  A+LF+ PPS  CC KLKE +PCYC+Y+ DPSLK YI S   R IAR C   IPT A+
Subjt:  CDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPTVAS

TrEMBL top hitse value%identityAlignment
A0A1R3KCA7 AAI domain-containing protein2.2e-1553.75Show/hide
Query:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        + V +  TH A A TC   ELT PCA A++   PPS  CC KLKE EPC+C+YL DPSLK YIN+  A+ IA  C  T P
Subjt:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

A0A2G9G3M3 AAI domain-containing protein1.8e-1450.62Show/hide
Query:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        + VL++   +AAAV C P EL+ PC  A   SQPPS  CC KL+E  PC C YL DP+L+ Y+NS GAR +A  C    PT
Subjt:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT

A0A444E5R6 AAI domain-containing protein3.1e-1448.15Show/hide
Query:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        +A+L+ R+  A +VTC+P EL+  CASA L + PP+  CCAKLKE  PC+C+Y  +P+L+ YINS  ++ +A+ C   IPT
Subjt:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT

A0A4S4CYQ9 AAI domain-containing protein3.1e-1450.62Show/hide
Query:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        MAVL+    +A AVTC P EL+ PC  A   SQPPSR CC K++E  PC C YL DP+L+ Y+NS  +R +A  C    PT
Subjt:  MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT

A0A6J1CPW9 non-specific lipid-transfer protein 2P-like5.7e-1657.97Show/hide
Query:  CDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPTVAS
        C+P+EL  PC  A+LF+ PPS  CC KLKE +PCYC+Y+ DPSLK YI S   R IAR C   IPT A+
Subjt:  CDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPTVAS

SwissProt top hitse value%identityAlignment
P82353 Non-specific lipid-transfer protein 21.2e-1043.28Show/hide
Query:  VTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        VTC P +L+ PC        P    CC KL+E  PC C YL +PSL+ Y+NS  AR +A  C   +P
Subjt:  VTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

P82901 Non-specific lipid-transfer protein 2P1.2e-0738.46Show/hide
Query:  CDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        C  ++L   CASA L    PS  CC  L+  +PC+C+Y  DP+   YI S  AR   + C   +P
Subjt:  CDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

P86809 Non-specific lipid-transfer protein 23.7e-1252.46Show/hide
Query:  TCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQC
        TC   +L+ PC +A   + PPS  CC KLKE +PC C YL DP+LK+Y+NS GAR  A  C
Subjt:  TCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQC

Q43681 Probable non-specific lipid-transfer protein AKCS92.5e-1347.89Show/hide
Query:  LAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        +A AVTC+P EL+  C  A      PS  CC+KLK  EPC C Y+ +PSLK Y+NS GA+ +   C  T P
Subjt:  LAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.7e-1541.25Show/hide
Query:  AVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        A+L++   +A  VTC P +L   CA+A   S PPS  CC KL+E +PC C Y+ +P+L+ Y++S  AR ++  CK   P+
Subjt:  AVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein9.3e-1136.59Show/hide
Query:  MAVLII--RTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        + +LI+     +AA   C+PA+L+ PC    +    PS  CC+K+KE + C C+YL +P+ K ++NS  A+ IA  C    P
Subjt:  MAVLII--RTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.6e-1647.44Show/hide
Query:  VLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP
        +L+I    A AVTC P +L+ PCA+A   S PPS  CCAKLKE  PC C Y+ +PSL+ ++++  AR +++ CK  IP
Subjt:  VLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIP

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.4e-1142.65Show/hide
Query:  VTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        VTCD  +L+  C +A     PPS +CC KLKEHE C C Y+ +P    Y+ S  AR     C    PT
Subjt:  VTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.2e-1242.86Show/hide
Query:  AAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT
        A VTCD  +L+  CA+  L   PPS  CC KLKE +PC+C Y+ DP    Y+ S+ A+     C    PT
Subjt:  AAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTCTCATCATCAGAACTCATTTGGCAGCTGCCGTGACTTGCGACCCTGCGGAGCTCACTGGGCCATGTGCGTCTGCTTTCTTATTCTCACAACCGCCGTCACG
GAATTGTTGCGCAAAGCTGAAGGAGCACGAACCATGCTATTGTAAGTACCTCAACGATCCATCGTTGAAAGATTATATCAATTCCTCCGGTGCTAGGGCAATTGCTCGAC
AATGCAAGGCTACCATACCCACCGTGGCTAGTTGCGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTCTCATCATCAGAACTCATTTGGCAGCTGCCGTGACTTGCGACCCTGCGGAGCTCACTGGGCCATGTGCGTCTGCTTTCTTATTCTCACAACCGCCGTCACG
GAATTGTTGCGCAAAGCTGAAGGAGCACGAACCATGCTATTGTAAGTACCTCAACGATCCATCGTTGAAAGATTATATCAATTCCTCCGGTGCTAGGGCAATTGCTCGAC
AATGCAAGGCTACCATACCCACCGTGGCTAGTTGCGCATAG
Protein sequenceShow/hide protein sequence
MAVLIIRTHLAAAVTCDPAELTGPCASAFLFSQPPSRNCCAKLKEHEPCYCKYLNDPSLKDYINSSGARAIARQCKATIPTVASCA