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MS027635 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027635
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnon-specific lipid-transfer protein 2-like
Genome locationscaffold20:2510241..2510540
RNA-Seq ExpressionMS027635
SyntenyMS027635
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53818.1 hypothetical protein Csa_014950 [Cucumis sativus]2.4e-1246.94Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M  L  TSL LLV AM  LL GAR A+ A TC+   L PC+ A T    PS  CC ++REQ+ C+C Y +NP    Y++S+  K IIS CG    P C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

XP_008444080.1 PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo]1.6e-1347.96Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M  L  TSL LLV A+V LL GAR AE A TC+   L PC+ A T    PS  CC ++REQ+ C+C Y +NP    Y++S+  K IIS CG   +P C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

XP_022143310.1 uncharacterized protein LOC111013210 [Momordica charantia]4.9e-26100Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCY
        MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCY
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCY

XP_022955426.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]2.4e-1244.9Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M K PIT  FL +A MV LL+GAR AE A  C    L  C  A T    PS  CC ++REQ+ C C Y RNP    Y+QS   +K+ ++CG    P+C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

XP_038904866.1 non-specific lipid-transfer protein 2-like [Benincasa hispida]5.1e-1550Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M  L  TSL LLV AM  LL GAR AE A TC    L PC+ AFT    PS ACC +++EQ+ C+C Y +NPK   Y++S   K +IS CG  S P C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

TrEMBL top hitse value%identityAlignment
A0A0A0KW85 AAI domain-containing protein1.2e-1246.94Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M  L  TSL LLV AM  LL GAR A+ A TC+   L PC+ A T    PS  CC ++REQ+ C+C Y +NP    Y++S+  K IIS CG    P C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

A0A1S3B931 non-specific lipid-transfer protein 2-like8.0e-1447.96Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M  L  TSL LLV A+V LL GAR AE A TC+   L PC+ A T    PS  CC ++REQ+ C+C Y +NP    Y++S+  K IIS CG   +P C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

A0A5A7VAB3 Non-specific lipid-transfer protein 2-like8.0e-1447.96Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M  L  TSL LLV A+V LL GAR AE A TC+   L PC+ A T    PS  CC ++REQ+ C+C Y +NP    Y++S+  K IIS CG   +P C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

A0A6J1CNG6 uncharacterized protein LOC1110132102.4e-26100Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCY
        MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCY
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCY

A0A6J1D4R3 non-specific lipid-transfer protein 2-like1.2e-1247Show/hide
Query:  MSKLPITS--LFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M KL IT   L+LLV A+  LL GAR  E A TC    L PC+ A    + PS ACC ++REQ+ C C Y RNP    Y+QS   KK+ S CG  + P+C
Subjt:  MSKLPITS--LFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 23.9e-1034.07Show/hide
Query:  SLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        ++ +L  AMV    G     A A+C+   L  C  A     RP+ ACC  +R Q+ C+C + ++P+Y  Y+ S   +K +S CG  ++PTC
Subjt:  SLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

P20145 Probable non-specific lipid-transfer protein3.3e-0936.78Show/hide
Query:  LVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        ++  MVV LA    A A A C+   L  C  A     +PSG CC  +R Q+ C C Y ++P Y HY+ S   +  ++ CG   VP C
Subjt:  LVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

P82900 Non-specific lipid-transfer protein 2G3.3e-0933.67Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M K  +T+L L +  +     GARAA     C    L  C  A     +PSG CC  +R Q+ C+C Y ++P Y  Y++S   +  ++ CG  +VP C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

P86809 Non-specific lipid-transfer protein 25.2e-1041.94Show/hide
Query:  ATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCG
        ATC    L PCL A T +  PS ACC +++EQ+ C C Y ++P   +Y+ S   +K  S CG
Subjt:  ATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCG

Q10ST8 Non-specific lipid-transfer protein 28.8e-1034.07Show/hide
Query:  SLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        ++ +L  AMV    G     A A C+   L  C  A     RP+ ACC  +R Q+ C+C + ++P+Y  Y+ S   +K +S CG  ++PTC
Subjt:  SLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.5e-0937.5Show/hide
Query:  LLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        +L  A  +LL     AE   TC    L  C  A T    PS ACC ++REQ+ C C Y RNP    Y+ S   +K+ + C   S P+C
Subjt:  LLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.1e-1242.65Show/hide
Query:  TCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        TCD   L+PCL A T   +PSGACC ++ EQ+SC C + +NP +  Y+ S   +K++  C   + PTC
Subjt:  TCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.1e-1034.69Show/hide
Query:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        M K  + SLF L A ++++LA    A  A TC    L PC  A T    PS  CC +++EQ  C C Y RNP    ++ +   +K+   C    +P C
Subjt:  MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.9e-1036.11Show/hide
Query:  EAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        E   TCD   L  C+ A +    PS  CC +++E E+C C Y +NP Y+ Y+ S   +K ++ C   + PTC
Subjt:  EAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.2e-1137.21Show/hide
Query:  VAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC
        + A  V L+G    EA  TCD   L  C       V PS  CC +++EQ+ C+C Y ++P+Y+ Y+ S+  KK ++ CG    PTC
Subjt:  VAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAACTTCCGATCACAAGCCTTTTCCTTTTGGTTGCTGCAATGGTGGTGCTTCTCGCTGGAGCTCGTGCAGCGGAGGCTGCGGCGACTTGCGACCTTGACAATCT
GAAACCATGTCTCTTGGCTTTCACGTTGCATGTGCGGCCATCGGGAGCTTGCTGCCGGAGGGTGAGGGAGCAAGAATCATGCTACTGTGCGTACTACAGAAATCCAAAAT
ATACGCATTACTTGCAATCTTCTGCCGTCAAAAAGATCATTTCGAGATGTGGCTTTACCAGTGTTCCTACCTGCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAACTTCCGATCACAAGCCTTTTCCTTTTGGTTGCTGCAATGGTGGTGCTTCTCGCTGGAGCTCGTGCAGCGGAGGCTGCGGCGACTTGCGACCTTGACAATCT
GAAACCATGTCTCTTGGCTTTCACGTTGCATGTGCGGCCATCGGGAGCTTGCTGCCGGAGGGTGAGGGAGCAAGAATCATGCTACTGTGCGTACTACAGAAATCCAAAAT
ATACGCATTACTTGCAATCTTCTGCCGTCAAAAAGATCATTTCGAGATGTGGCTTTACCAGTGTTCCTACCTGCAGCTAG
Protein sequenceShow/hide protein sequence
MSKLPITSLFLLVAAMVVLLAGARAAEAAATCDLDNLKPCLLAFTLHVRPSGACCRRVREQESCYCAYYRNPKYTHYLQSSAVKKIISRCGFTSVPTCS