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MS027649 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027649
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold156:177065..179363
RNA-Seq ExpressionMS027649
SyntenyMS027649
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159386.1 uncharacterized protein LOC111025802 [Momordica charantia]9.4e-2895.95Show/hide
Query:  LGEGSSTQQRDVSDKTKQPKSRSKDKGKMPMTLDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSDNDVVDEL
        LGEG+STQQRDVSDKTKQPKSRSKDKGKMPMTLDE EWVDIESDNENEDGAIRYDDDSMEDPIS SDNDVVDEL
Subjt:  LGEGSSTQQRDVSDKTKQPKSRSKDKGKMPMTLDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSDNDVVDEL
XP_022159386.1 uncharacterized protein LOC111025802 [Momordica charantia]9.1e-2394.92Show/hide
Query:  MIEGGAYYHGATSSSCDISSRGIRGPMDRFMVTDVGDVDANGGNKVQNQVTPTNAKEAR
        M+EGGAYYHGATSSSCDISSRGI GPMDRFMVTDVGDVDA+GGNKVQNQVTPTNAKEAR
Subjt:  MIEGGAYYHGATSSSCDISSRGIRGPMDRFMVTDVGDVDANGGNKVQNQVTPTNAKEAR
XP_022159386.1 uncharacterized protein LOC111025802 [Momordica charantia]5.6e-0433.53Show/hide
Query:  IEGGAYYHGATSSSCDISSRGIRGPMDRFMVT-DVGDVDANGGNKVQNQVTP--TNAKEARNS------------------LGE----------------
        ++GGA    +   S   S+RG+RGPMDRF+V+ D  D D      V+N+ +P   N+KE  N                   +GE                
Subjt:  IEGGAYYHGATSSSCDISSRGIRGPMDRFMVT-DVGDVDANGGNKVQNQVTP--TNAKEARNS------------------LGE----------------

Query:  ---GSSTQQRDVSDKTKQPKSRSKDKGKMPMT---LDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSD
           G   Q R    K+    S++  K K  +T   +DEEEW D++SD+E +D AIRYDD S EDP+S+ D
Subjt:  ---GSSTQQRDVSDKTKQPKSRSKDKGKMPMT---LDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSD
TrEMBL top hitse value%identityAlignment
A0A6J1E3R9 uncharacterized protein LOC1110258024.6e-2895.95Show/hide
Query:  LGEGSSTQQRDVSDKTKQPKSRSKDKGKMPMTLDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSDNDVVDEL
        LGEG+STQQRDVSDKTKQPKSRSKDKGKMPMTLDE EWVDIESDNENEDGAIRYDDDSMEDPIS SDNDVVDEL
Subjt:  LGEGSSTQQRDVSDKTKQPKSRSKDKGKMPMTLDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSDNDVVDEL
A0A6J1E3R9 uncharacterized protein LOC1110258024.4e-2394.92Show/hide
Query:  MIEGGAYYHGATSSSCDISSRGIRGPMDRFMVTDVGDVDANGGNKVQNQVTPTNAKEAR
        M+EGGAYYHGATSSSCDISSRGI GPMDRFMVTDVGDVDA+GGNKVQNQVTPTNAKEAR
Subjt:  MIEGGAYYHGATSSSCDISSRGIRGPMDRFMVTDVGDVDANGGNKVQNQVTPTNAKEAR
A0A6J1E3R9 uncharacterized protein LOC1110258022.7e-0433.53Show/hide
Query:  IEGGAYYHGATSSSCDISSRGIRGPMDRFMVT-DVGDVDANGGNKVQNQVTP--TNAKEARNS------------------LGE----------------
        ++GGA    +   S   S+RG+RGPMDRF+V+ D  D D      V+N+ +P   N+KE  N                   +GE                
Subjt:  IEGGAYYHGATSSSCDISSRGIRGPMDRFMVT-DVGDVDANGGNKVQNQVTP--TNAKEARNS------------------LGE----------------

Query:  ---GSSTQQRDVSDKTKQPKSRSKDKGKMPMT---LDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSD
           G   Q R    K+    S++  K K  +T   +DEEEW D++SD+E +D AIRYDD S EDP+S+ D
Subjt:  ---GSSTQQRDVSDKTKQPKSRSKDKGKMPMT---LDEEEWVDIESDNENEDGAIRYDDDSMEDPISYSD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAAGGAGGTGCATATTATCATGGTGCAACTTCAAGTAGTTGTGATATTTCTTCGAGAGGAATTCGAGGACCAATGGATCGATTCATGGTGACTGATGTT
GGTGATGTTGATGCCAATGGTGGAAATAAGGTTCAAAATCAAGTCACTCCTACAAATGCGAAGGAGGCTCGTAATTCTCTTGGAGAAGGAAGTAGTACTCAACAG
AGAGACGTTAGTGATAAGACAAAACAACCAAAATCTAGAAGTAAAGATAAAGGGAAAATGCCGATGACATTGGATGAAGAGGAATGGGTGGATATTGAAAGTGAC
AATGAAAATGAGGATGGAGCAATTAGATATGACGATGACTCTATGGAAGATCCTATTAGTTATAGTGATAATGATGTCGTGGACGAACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGAAGGAGGTGCATATTATCATGGTGCAACTTCAAGTAGTTGTGATATTTCTTCGAGAGGAATTCGAGGACCAATGGATCGATTCATGGTGACTGATGTT
GGTGATGTTGATGCCAATGGTGGAAATAAGGTTCAAAATCAAGTCACTCCTACAAATGCGAAGGAGGCTCGTAATTCTCTTGGAGAAGGAAGTAGTACTCAACAG
AGAGACGTTAGTGATAAGACAAAACAACCAAAATCTAGAAGTAAAGATAAAGGGAAAATGCCGATGACATTGGATGAAGAGGAATGGGTGGATATTGAAAGTGAC
AATGAAAATGAGGATGGAGCAATTAGATATGACGATGACTCTATGGAAGATCCTATTAGTTATAGTGATAATGATGTCGTGGACGAACTTTAG
Protein sequenceShow/hide protein sequence
MIEGGAYYHGATSSSCDISSRGIRGPMDRFMVTDVGDVDANGGNKVQNQVTPTNAKEARNSLGEGSSTQQRDVSDKTKQPKSRSKDKGKMPMTLDEEEWVDIESD
NENEDGAIRYDDDSMEDPISYSDNDVVDEL