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MS027709 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027709
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold729:1618463..1619023
RNA-Seq ExpressionMS027709
SyntenyMS027709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7832723.1 uncharacterized protein G2W53_015056 [Senna tora]5.9e-0446.67Show/hide
Query:  LRSDYHLISSSAVL--HNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE
        LR+    I  S +L  HNIYT S RQ P +NPKQ   AR F HLP  P+QT+PL         P     LLLHSP+   RFLR   L R+
Subjt:  LRSDYHLISSSAVL--HNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE

KAF7832724.1 uncharacterized protein G2W53_015057 [Senna tora]2.6e-0450.67Show/hide
Query:  LHNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE
        +HNIYT S RQ P +NPKQ + AR F HLP  P+QTLPL         P     LLLHSP+   RFLR   L R+
Subjt:  LHNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE

KAF7832780.1 uncharacterized protein G2W53_015113 [Senna tora]6.9e-0552Show/hide
Query:  LHNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE
        +HNIYT S RQ P +NPKQN  AR F HLP  P+QTLPLP   +          LLLHSP+   RFLR   L R+
Subjt:  LHNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE

KAF7832857.1 uncharacterized protein G2W53_015190 [Senna tora]4.5e-0447.62Show/hide
Query:  LISSSAVL--HNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE
        L+  S +L  HNIY+ S RQ P +NPKQN  AR F HLP  P+QTLPL         P     LLLHSP+   RFL+   L R+
Subjt:  LISSSAVL--HNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE

KAF7832898.1 uncharacterized protein G2W53_015231 [Senna tora]1.2e-0447.78Show/hide
Query:  LRSDYHLISSSAVL--HNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE
        LR+    I  S +L  HNIY+ STRQ P +NPKQ + AR F HLP  P+QTLPL         P     LLLHSP+   RFLR   L R+
Subjt:  LRSDYHLISSSAVL--HNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPRE

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACAAGAACAGAGCAAATTCGAAACTCAGAAGCGATTACCATTTAATTTCTTCCAGTGCTGTGCTCCACAACATCTACACTCGCAGCACACGACAAAATCCTCC
GAAAAATCCCAAACAGAATACAACTGCACGAAAATTCCTTCATCTTCCTCCAATTCCAGATCAAACACTTCCTCTTCCGATTCCTACTCTTAACGCCTCTTCTCCTCTTT
CTCTCGCCTATCTTCTCCTTCACTCTCCCCAAACACCGCCTCGTTTTCTCCGGCACCGATTCCTTCCTCGAGAATTTGTAGCTCCGCAAGTACATTTGCCTGCACGACAC
TCCATCGGCCACCAGAACTCGCCGCCTCGCTCGCGAACTCGCCGATTTGGCGATCTCCGCGTCCGAATCCGTCCAACTGTGGAGGTTGATGTACGCGCCCCGCGGCGGAC
GGCCGGCGTCGCTGATGCAGTAGCTCGCCGTGCAGAGGGAGCTCATTTTTCGGAAGCTTTTTCGCCGATCGTTAATGGCGGAGAACGGAGTGGAGAATCTGGAGCGCTAG
CGGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACAAGAACAGAGCAAATTCGAAACTCAGAAGCGATTACCATTTAATTTCTTCCAGTGCTGTGCTCCACAACATCTACACTCGCAGCACACGACAAAATCCTCC
GAAAAATCCCAAACAGAATACAACTGCACGAAAATTCCTTCATCTTCCTCCAATTCCAGATCAAACACTTCCTCTTCCGATTCCTACTCTTAACGCCTCTTCTCCTCTTT
CTCTCGCCTATCTTCTCCTTCACTCTCCCCAAACACCGCCTCGTTTTCTCCGGCACCGATTCCTTCCTCGAGAATTTGTAGCTCCGCAAGTACATTTGCCTGCACGACAC
TCCATCGGCCACCAGAACTCGCCGCCTCGCTCGCGAACTCGCCGATTTGGCGATCTCCGCGTCCGAATCCGTCCAACTGTGGAGGTTGATGTACGCGCCCCGCGGCGGAC
GGCCGGCGTCGCTGATGCAGTAGCTCGCCGTGCAGAGGGAGCTCATTTTTCGGAAGCTTTTTCGCCGATCGTTAATGGCGGAGAACGGAGTGGAGAATCTGGAGCGCTAG
CGGAAGATTGA
Protein sequenceShow/hide protein sequence
MKNKNRANSKLRSDYHLISSSAVLHNIYTRSTRQNPPKNPKQNTTARKFLHLPPIPDQTLPLPIPTLNASSPLSLAYLLLHSPQTPPRFLRHRFLPREFVAPQVHLPARH
SIGHQNSPPRSRTRRFGDLRVRIRPTVEVDVRAPRRTAGVADAVARRAEGAHFSEAFSPIVNGGERSGESGALAED