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MS027712 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027712
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold729:1759857..1760069
RNA-Seq ExpressionMS027712
SyntenyMS027712
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044076.1 hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa]1.3e-0449.38Show/hide
Query:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP---------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKPPS
        MSQR G  RH RRPSQGVF+AADYLS+PP               P  + + RPP Q +       RPPAPAA+N+AQ P S
Subjt:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP---------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKPPS

KAG6580559.1 hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sororia]8.9e-0654.55Show/hide
Query:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP-------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKP
        MSQR G  RH RRPSQ VF+AADYLS+PP       A   A P  + + RPP Q +    A  RPPAPAASNEA  P
Subjt:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP-------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKP

KAG6596419.1 hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0554.43Show/hide
Query:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP-------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKPPS
        MSQRSG  RH RRPSQGVF+ ADYLS+PP             PQ S ++RPP Q +      ARPPAPA SNEA  P S
Subjt:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP-------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKPPS

TrEMBL top hitse value%identityAlignment
A0A5A7TPQ1 Uncharacterized protein6.3e-0549.38Show/hide
Query:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP---------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKPPS
        MSQR G  RH RRPSQGVF+AADYLS+PP               P  + + RPP Q +       RPPAPAA+N+AQ P S
Subjt:  MSQRSGTSRHHRRPSQGVFVAADYLSDPP---------AAAEAAPQQSPVARPPSQPQIR--AVARPPAPAASNEAQKPPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAGCGCTCCGGCACCAGCAGGCACCACAGGCGGCCTTCGCAGGGCGTTTTCGTGGCGGCGGATTACCTGTCCGACCCGCCCGCCGCCGCTGAAGCTGCCCCGCA
GCAGAGTCCGGTGGCTCGCCCGCCGTCGCAGCCGCAGATCCGAGCGGTGGCCAGGCCTCCTGCTCCGGCGGCCTCCAATGAGGCTCAGAAACCGCCGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCAGCGCTCCGGCACCAGCAGGCACCACAGGCGGCCTTCGCAGGGCGTTTTCGTGGCGGCGGATTACCTGTCCGACCCGCCCGCCGCCGCTGAAGCTGCCCCGCA
GCAGAGTCCGGTGGCTCGCCCGCCGTCGCAGCCGCAGATCCGAGCGGTGGCCAGGCCTCCTGCTCCGGCGGCCTCCAATGAGGCTCAGAAACCGCCGAGCTAG
Protein sequenceShow/hide protein sequence
MSQRSGTSRHHRRPSQGVFVAADYLSDPPAAAEAAPQQSPVARPPSQPQIRAVARPPAPAASNEAQKPPS