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MS027786 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027786
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich protein DOT1-like
Genome locationscaffold22:82261..82839
RNA-Seq ExpressionMS027786
SyntenyMS027786
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584096.1 hypothetical protein SDJN03_20028, partial [Cucurbita argyrosperma subsp. sororia]3.7e-0941.83Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVG---PGGLGFDPNFGVG
        FRFLC++  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF         A GGG GGG G  G G+GS    G G G G    GG G     G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVG---PGGLGFDPNFGVG

Query:  IGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATG
         G     +G  +G G GGG    G G           G + + +G G G   G
Subjt:  IGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATG

XP_022139970.1 glycine-rich cell wall structural protein 1-like [Momordica charantia]9.9e-1547.53Show/hide
Query:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVGVGPGGL
        MGEF  FRF CV   ILVL R  LGYGGGESGWGFNN+QY CPYWRGCGSF    GGG GGG      G +G G G             G+G G G GG 
Subjt:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVGVGPGGL

Query:  GFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATG
        G    +G G G GA   G   G G GGG    G GY          G      G GGG   G
Subjt:  GFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATG

XP_022140140.1 glycine-rich protein DOT1-like [Momordica charantia]7.0e-9395.31Show/hide
Query:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVGV
        MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGV V
Subjt:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVGV

Query:  GPGGLGFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGADECIHHLAKTTTKITANTQP
        GPGGLGFDPNFGVGIGSGARAAG SAGIGMGGGEI NGRGYY    DDDNEGEDAHSEGNGGGQATGN HGADECIHHLAKTTTKIT+NTQP
Subjt:  GPGGLGFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGADECIHHLAKTTTKITANTQP

XP_022923768.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]3.3e-1040.88Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVG---PGGLGFDPNFGVG
        FRFLC++  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF         A GGG GGG G  G G+GS    G G G G    GG G     G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVG---PGGLGFDPNFGVG

Query:  IGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGAD
         G     +G   G G GG  +  G  Y          G      G GGG  +G  +G +
Subjt:  IGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGAD

XP_023520206.1 glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo]4.8e-0939.88Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI------EAVGGGTGGGTG---SIGIGIGSNVSAGTGVGVGPGGLGFDPNFGVGI
        FRFLC+V  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF        + GGG G G G     G G+GS+  +G G G G GG G +   G G 
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI------EAVGGGTGGGTG---SIGIGIGSNVSAGTGVGVGPGGLGFDPNFGVGI

Query:  GSGARAAGASAGIGMGGG----------EICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGAD
        G GA   G   G G GGG           +  G  Y          G      G GGG  +G  +G +
Subjt:  GSGARAAGASAGIGMGGG----------EICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGAD

TrEMBL top hitse value%identityAlignment
A0A5D3BJP2 Uncharacterized protein2.4e-0636.71Show/hide
Query:  ASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-----------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVGPGGLGFDPNF
        +SF F C +  +LVL +   GY     GWGF+N+   C YWRGCG+F               GGG+GGG G+ G G+G     G G G G GG G     
Subjt:  ASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-----------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVGPGGLGFDPNF

Query:  GVGIGSGARAA-GASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGN
        G G G G+R   G  +G G GGG +  G             G      G GGG  +GN
Subjt:  GVGIGSGARAA-GASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGN

A0A6J1CDR6 glycine-rich cell wall structural protein 1-like4.8e-1547.53Show/hide
Query:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVGVGPGGL
        MGEF  FRF CV   ILVL R  LGYGGGESGWGFNN+QY CPYWRGCGSF    GGG GGG      G +G G G             G+G G G GG 
Subjt:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVGVGPGGL

Query:  GFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATG
        G    +G G G GA   G   G G GGG    G GY          G      G GGG   G
Subjt:  GFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATG

A0A6J1CE99 glycine-rich protein DOT1-like3.4e-9395.31Show/hide
Query:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVGV
        MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGV V
Subjt:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVGV

Query:  GPGGLGFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGADECIHHLAKTTTKITANTQP
        GPGGLGFDPNFGVGIGSGARAAG SAGIGMGGGEI NGRGYY    DDDNEGEDAHSEGNGGGQATGN HGADECIHHLAKTTTKIT+NTQP
Subjt:  GPGGLGFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGADECIHHLAKTTTKITANTQP

A0A6J1EAJ0 glycine-rich cell wall structural protein 2-like1.6e-1040.88Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVG---PGGLGFDPNFGVG
        FRFLC++  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF         A GGG GGG G  G G+GS    G G G G    GG G     G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVGVG---PGGLGFDPNFGVG

Query:  IGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGAD
         G     +G   G G GG  +  G  Y          G      G GGG  +G  +G +
Subjt:  IGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGAD

A0A6J1KJ79 glycine-rich cell wall structural protein 1-like8.8e-0939.43Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTG--------------SIGIGIGSNVSAGTGVGVGPG
        F FLC++  +LVLGR   G+ GG+ GWGFNN +  C YWRGCGSF         A GGG GGG G                G G+GS+  +G G G G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTG--------------SIGIGIGSNVSAGTGVGVGPG

Query:  GLGFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGADECIHH
        G G +   G G G GA   G + G G GGG    G GY          G      G GGG   GN     E   H
Subjt:  GLGFDPNFGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGADECIHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACATCAACTTCAAGCCACTGCAACCCAAGTTTGTTAGCCAACGTATAATGGGTGAGTTTGCAAGTTTCAGATTTTTGTGTGTCGTGATCGCGATTCTTGTTTT
AGGCAGAGCTTGTTTGGGGTATGGAGGAGGTGAGAGCGGGTGGGGATTTAACAATCAACAATATCATTGCCCATATTGGCGGGGATGCGGAAGCTTCATTGAGGCCGTTG
GAGGAGGGACTGGGGGAGGTACTGGTAGTATTGGTATTGGAATTGGCTCCAACGTCAGCGCCGGCACCGGCGTCGGTGTTGGGCCTGGTGGACTAGGATTTGACCCCAAC
TTCGGCGTTGGCATCGGCTCCGGTGCTAGGGCTGCTGGTGCCAGCGCCGGTATTGGGATGGGTGGAGGAGAAATTTGCAATGGCCGCGGATACTACGACGACGATGACGA
CGACGATAACGAAGGGGAGGACGCGCACAGCGAGGGGAATGGAGGAGGACAAGCCACGGGAAATTACCATGGAGCTGATGAATGCATTCATCATCTAGCTAAAACTACAA
CTAAAATCACTGCTAATACTCAACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACATCAACTTCAAGCCACTGCAACCCAAGTTTGTTAGCCAACGTATAATGGGTGAGTTTGCAAGTTTCAGATTTTTGTGTGTCGTGATCGCGATTCTTGTTTT
AGGCAGAGCTTGTTTGGGGTATGGAGGAGGTGAGAGCGGGTGGGGATTTAACAATCAACAATATCATTGCCCATATTGGCGGGGATGCGGAAGCTTCATTGAGGCCGTTG
GAGGAGGGACTGGGGGAGGTACTGGTAGTATTGGTATTGGAATTGGCTCCAACGTCAGCGCCGGCACCGGCGTCGGTGTTGGGCCTGGTGGACTAGGATTTGACCCCAAC
TTCGGCGTTGGCATCGGCTCCGGTGCTAGGGCTGCTGGTGCCAGCGCCGGTATTGGGATGGGTGGAGGAGAAATTTGCAATGGCCGCGGATACTACGACGACGATGACGA
CGACGATAACGAAGGGGAGGACGCGCACAGCGAGGGGAATGGAGGAGGACAAGCCACGGGAAATTACCATGGAGCTGATGAATGCATTCATCATCTAGCTAAAACTACAA
CTAAAATCACTGCTAATACTCAACCTTAG
Protein sequenceShow/hide protein sequence
MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVGVGPGGLGFDPN
FGVGIGSGARAAGASAGIGMGGGEICNGRGYYDDDDDDDNEGEDAHSEGNGGGQATGNYHGADECIHHLAKTTTKITANTQP