; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027787 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027787
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationscaffold22:87942..88697
RNA-Seq ExpressionMS027787
SyntenyMS027787
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584096.1 hypothetical protein SDJN03_20028, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2573.6Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGG--GGSAGSNGYGSGFGGGV---GSG
        GGGGGGG GGG NGYGQGMGFGAGFG GGGGGGGGGGGGGG GNSV GGEAYGHGSGFGGGGG+GGGGAGGGGGG  GG+ G NGYGSGFGGGV   GSG
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGG--GGSAGSNGYGSGFGGGV---GSG

Query:  EGGGGGGGGGGESSSNGGGGYGKGEGGGFG---GYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGN-HGADDQSTDHSKTTTKTSTTQP
         GGGGGGGGGG   S   GGYGKGEGGGFG   G+TNS GGGGG     GGQGMGMGF  GMGFGMG+GFGMGN +   D+S  H++  T  +  +P
Subjt:  EGGGGGGGGGGESSSNGGGGYGKGEGGGFG---GYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGN-HGADDQSTDHSKTTTKTSTTQP

KGN64507.1 hypothetical protein Csa_013094 [Cucumis sativus]3.2e-2163.09Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGG--GVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEG
        GGG G GSG GGNG+GQGMGFGAGFGL GGGGGGGGGGGGGG GNSVWGGEAYGHGSGFGGGG  G GGGG GGG GGGG+ G NGYGSGFGGG+GSG  
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGG--GVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEG

Query:  GGGGGGGGGESSSNGG----------------------------------GGYGKGEGGGF---GGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGM
        GGGGGGGGG SS+NGG                                  GGYGKGEG GF   GG TN+FGGGG      GG+GMGMGF  GMGFGMG+
Subjt:  GGGGGGGGGESSSNGG----------------------------------GGYGKGEGGGF---GGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGM

Query:  GFGMG-----NHGADDQSTDHSKTTTKTSTTQP
        GFGMG     N+GADD   D +K   KT+ +QP
Subjt:  GFGMG-----NHGADDQSTDHSKTTTKTSTTQP

XP_011648420.1 glycine-rich protein DOT1 [Cucumis sativus]3.2e-2163.09Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGG--GVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEG
        GGG G GSG GGNG+GQGMGFGAGFGL GGGGGGGGGGGGGG GNSVWGGEAYGHGSGFGGGG  G GGGG GGG GGGG+ G NGYGSGFGGG+GSG  
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGG--GVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEG

Query:  GGGGGGGGGESSSNGG----------------------------------GGYGKGEGGGF---GGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGM
        GGGGGGGGG SS+NGG                                  GGYGKGEG GF   GG TN+FGGGG      GG+GMGMGF  GMGFGMG+
Subjt:  GGGGGGGGGESSSNGG----------------------------------GGYGKGEGGGF---GGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGM

Query:  GFGMG-----NHGADDQSTDHSKTTTKTSTTQP
        GFGMG     N+GADD   D +K   KT+ +QP
Subjt:  GFGMG-----NHGADDQSTDHSKTTTKTSTTQP

XP_022139970.1 glycine-rich cell wall structural protein 1-like [Momordica charantia]2.2e-5496.83Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEGGG
        GGGGGGGSGGGGNGYGQGMGFGAGFGL GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSG GGG
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEGGG

Query:  GGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTTKTSTTQP
        GGGGGGGESSSNGGGGYGKGEGGGFGGYTNS   GGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDH+KTTTKTSTTQP
Subjt:  GGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTTKTSTTQP

XP_023001646.1 glycine-rich cell wall structural protein 1-like [Cucurbita maxima]1.3e-2273.3Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA----GSNGYGSGFGGGV---G
        GGGGGGG GGGGNGYGQGMGFGAGFG GGGGGGGGGGGGG  GNSV GGEAYGHGSGFGGGGG+GGGGAGGGGGGGG +    G NGYGSGFGGGV   G
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA----GSNGYGSGFGGGV---G

Query:  SGEGGGGGGGGGGESSSNGGGGYGKGEGGGFG---GYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTT
        SG GGGGGGGGGGES  +  GGYGKGEGGGFG   G+TNS G  GG     GGQGMGMGFGMG G G+G G G  N+GAD+ +      TT
Subjt:  SGEGGGGGGGGGGESSSNGGGGYGKGEGGGFG---GYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTT

TrEMBL top hitse value%identityAlignment
A0A0A0LUS3 Uncharacterized protein1.5e-2163.09Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGG--GVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEG
        GGG G GSG GGNG+GQGMGFGAGFGL GGGGGGGGGGGGGG GNSVWGGEAYGHGSGFGGGG  G GGGG GGG GGGG+ G NGYGSGFGGG+GSG  
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGG--GVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEG

Query:  GGGGGGGGGESSSNGG----------------------------------GGYGKGEGGGF---GGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGM
        GGGGGGGGG SS+NGG                                  GGYGKGEG GF   GG TN+FGGGG      GG+GMGMGF  GMGFGMG+
Subjt:  GGGGGGGGGESSSNGG----------------------------------GGYGKGEGGGF---GGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGM

Query:  GFGMG-----NHGADDQSTDHSKTTTKTSTTQP
        GFGMG     N+GADD   D +K   KT+ +QP
Subjt:  GFGMG-----NHGADDQSTDHSKTTTKTSTTQP

A0A5D3BJP2 Uncharacterized protein1.4e-1763.35Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA-----GSNGYGSGFGGGVGSG
        GGGGG GSG GGNGYGQGMGFGAGFGLGGGGGGGGGGGG   GNSV GGEAYGHGSGFGGGGG+GGGGAGGGGGGGGS      G NGYGSGFGGG+GSG
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA-----GSNGYGSGFGGGVGSG

Query:  EGGGGGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGG---------------------QGMGMGFGMGMGFGMGMGFGMG-------NH
          GGGGGGGGG S+     G+G G GGG G   N  GGGGGG G GGG                      G GMG G GMGFGMG+GFGMG       N+
Subjt:  EGGGGGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGG---------------------QGMGMGFGMGMGFGMGMGFGMG-------NH

Query:  GADDQSTDHSKTTTKTSTTQP
        GA D   D +K   KT+  QP
Subjt:  GADDQSTDHSKTTTKTSTTQP

A0A6J1CDR6 glycine-rich cell wall structural protein 1-like1.1e-5496.83Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEGGG
        GGGGGGGSGGGGNGYGQGMGFGAGFGL GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSG GGG
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGL-GGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEGGG

Query:  GGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTTKTSTTQP
        GGGGGGGESSSNGGGGYGKGEGGGFGGYTNS   GGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDH+KTTTKTSTTQP
Subjt:  GGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTTKTSTTQP

A0A6J1KJ79 glycine-rich cell wall structural protein 1-like6.3e-2373.3Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA----GSNGYGSGFGGGV---G
        GGGGGGG GGGGNGYGQGMGFGAGFG GGGGGGGGGGGGG  GNSV GGEAYGHGSGFGGGGG+GGGGAGGGGGGGG +    G NGYGSGFGGGV   G
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA----GSNGYGSGFGGGV---G

Query:  SGEGGGGGGGGGGESSSNGGGGYGKGEGGGFG---GYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTT
        SG GGGGGGGGGGES  +  GGYGKGEGGGFG   G+TNS G  GG     GGQGMGMGFGMG G G+G G G  N+GAD+ +      TT
Subjt:  SGEGGGGGGGGGGESSSNGGGGYGKGEGGGFG---GYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFGMGMGFGMGNHGADDQSTDHSKTTT

E5GC64 Uncharacterized protein1.4e-1763.35Show/hide
Query:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA-----GSNGYGSGFGGGVGSG
        GGGGG GSG GGNGYGQGMGFGAGFGLGGGGGGGGGGGG   GNSV GGEAYGHGSGFGGGGG+GGGGAGGGGGGGGS      G NGYGSGFGGG+GSG
Subjt:  GGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVWGGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSA-----GSNGYGSGFGGGVGSG

Query:  EGGGGGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGG---------------------QGMGMGFGMGMGFGMGMGFGMG-------NH
          GGGGGGGGG S+     G+G G GGG G   N  GGGGGG G GGG                      G GMG G GMGFGMG+GFGMG       N+
Subjt:  EGGGGGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGG---------------------QGMGMGFGMGMGFGMGMGFGMG-------NH

Query:  GADDQSTDHSKTTTKTSTTQP
        GA D   D +K   KT+  QP
Subjt:  GADDQSTDHSKTTTKTSTTQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGGTGAAAGCGGCTGGGGATTTAACAATGAACAATATTGCCCATATTGGCGGGGATGCGGAAGCTTCTTTGGGGGTGGAGGAGGTGGCGGTGGCGGCGGCGGC
GAAGGGAACTCAGTTGGTGGGGTTGGGTCCGGCCATGGTGAAGGTTATGGAGGTGGGTTTGGTGGAGGAAGTAATGNGAGGCGGAGGAGGAGGCGGCGGCAGTGGTGGGG
GTGGCAATGGTTACGGCCAAGGAATGGGCTTCGGAGCAGGGTTTGGCCTCGGCGGAGGAGGTGGTGGCGGCGGAGGAGGCGGCGGCGGCGGTAGTGGTAATTCTGTTTGG
GGAGGGGAGGCGTATGGTCATGGAAGTGGGTTTGGGGGAGGTGGTGGTGTAGGTGGCGGTGGAGCTGGAGGCGGCGGCGGCGGTGGAGGATCAGCAGGTTCCAATGGTTA
CGGCAGTGGTTTTGGCGGCGGCGTAGGTAGTGGAGAAGGAGGAGGAGGCGGCGGTGGAGGGGGAGGAGAAAGTAGTTCAAATGGAGGGGGAGGATATGGTAAAGGGGAGG
GAGGGGGATTTGGAGGGTACACAAATAGCTTTGGCGGCGGCGGCGGCGGTGGGGGGAATGGAGGAGGACAAGGCATGGGAATGGGATTCGGCATGGGAATGGGGTTTGGG
ATGGGAATGGGGTTTGGCATGGGAAACCATGGGGCTGATGATCAGTCCACTGATCATTCTAAAACTACAACTAAAACCTCTACTACTCAGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGGTGAAAGCGGCTGGGGATTTAACAATGAACAATATTGCCCATATTGGCGGGGATGCGGAAGCTTCTTTGGGGGTGGAGGAGGTGGCGGTGGCGGCGGCGGC
GAAGGGAACTCAGTTGGTGGGGTTGGGTCCGGCCATGGTGAAGGTTATGGAGGTGGGTTTGGTGGAGGAAGTAATGNGAGGCGGAGGAGGAGGCGGCGGCAGTGGTGGGG
GTGGCAATGGTTACGGCCAAGGAATGGGCTTCGGAGCAGGGTTTGGCCTCGGCGGAGGAGGTGGTGGCGGCGGAGGAGGCGGCGGCGGCGGTAGTGGTAATTCTGTTTGG
GGAGGGGAGGCGTATGGTCATGGAAGTGGGTTTGGGGGAGGTGGTGGTGTAGGTGGCGGTGGAGCTGGAGGCGGCGGCGGCGGTGGAGGATCAGCAGGTTCCAATGGTTA
CGGCAGTGGTTTTGGCGGCGGCGTAGGTAGTGGAGAAGGAGGAGGAGGCGGCGGTGGAGGGGGAGGAGAAAGTAGTTCAAATGGAGGGGGAGGATATGGTAAAGGGGAGG
GAGGGGGATTTGGAGGGTACACAAATAGCTTTGGCGGCGGCGGCGGCGGTGGGGGGAATGGAGGAGGACAAGGCATGGGAATGGGATTCGGCATGGGAATGGGGTTTGGG
ATGGGAATGGGGTTTGGCATGGGAAACCATGGGGCTGATGATCAGTCCACTGATCATTCTAAAACTACAACTAAAACCTCTACTACTCAGCCTTAG
Protein sequenceShow/hide protein sequence
MGEVKAAGDLTMNNIAHIGGDAEASLGVEEVAVAAAAKGTQLVGLGPAMVKVMEVGLVEEVMXGGGGGGGSGGGGNGYGQGMGFGAGFGLGGGGGGGGGGGGGGSGNSVW
GGEAYGHGSGFGGGGGVGGGGAGGGGGGGGSAGSNGYGSGFGGGVGSGEGGGGGGGGGGESSSNGGGGYGKGEGGGFGGYTNSFGGGGGGGGNGGGQGMGMGFGMGMGFG
MGMGFGMGNHGADDQSTDHSKTTTKTSTTQP