; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027789 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027789
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAnkyrin repeat family protein
Genome locationscaffold22:134738..136330
RNA-Seq ExpressionMS027789
SyntenyMS027789
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34066.1 ankyrin repeat family protein [Cucumis melo subsp. melo]4.1e-0944.79Show/hide
Query:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH
        +SD HHGI +  D  R SSS QVNV E+++Q  +   ++KTS HK+ ++WA++K H  +    +    EH P H +L E A+RGDWK AEE+EK++
Subjt:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH

KAG6584102.1 hypothetical protein SDJN03_20034, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0642.11Show/hide
Query:  NSDGHHGINVI-DEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHPHFRLREGASRGDWKTAEEVEKEH
        +SD +H  +V  D   +SSS QVNV EDQ+Q    + ++KTS HK+ L+ A++K H  +         +H  H +L E A+RGDWKTA+ +EK H
Subjt:  NSDGHHGINVI-DEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHPHFRLREGASRGDWKTAEEVEKEH

XP_008440886.1 PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo]4.1e-0944.79Show/hide
Query:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH
        +SD HHGI +  D  R SSS QVNV E+++Q  +   ++KTS HK+ ++WA++K H  +    +    EH P H +L E A+RGDWK AEE+EK++
Subjt:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH

XP_023520202.1 uncharacterized protein LOC111783506 [Cucurbita pepo subsp. pepo]8.5e-0746.39Show/hide
Query:  NSDGHHGINVI-DEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCS-SECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH
        +SD +H  +V  D   +SSS QVNV EDQ+Q    + ++KTS HK+ L+ A++K H  +   C  +T  E HP H +L E A+RGDWKTA  VEK H
Subjt:  NSDGHHGINVI-DEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCS-SECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH

XP_031739107.1 ankyrin repeat-containing protein At5g02620 isoform X1 [Cucumis sativus]1.5e-0838.32Show/hide
Query:  NW-----YTNSDGHHGINVIDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHG-----CSSECEHETVVEHHPHFRLREGASRGDWKT
        NW     +++ D HHGI+V  +    SS  +NV EDQ+Q  +   ++KTS+HK+ ++WA++K H       +   EH+++     H +L E A+RGDWK 
Subjt:  NW-----YTNSDGHHGINVIDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHG-----CSSECEHETVVEHHPHFRLREGASRGDWKT

Query:  AEEVEKE
        AEE+EK+
Subjt:  AEEVEKE

TrEMBL top hitse value%identityAlignment
A0A0A0LUS0 ANK_REP_REGION domain-containing protein1.5e-0437.25Show/hide
Query:  NW-----YTNSDGHHGINVIDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHPHFRLREGASRGDWKTAEEVE
        NW     +++ D HHGI+V  +    SS  +NV EDQ+Q  +   ++KTS+HK+  R             EH+++     H +L E A+RGDWK AEE+E
Subjt:  NW-----YTNSDGHHGINVIDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHPHFRLREGASRGDWKTAEEVE

Query:  KE
        K+
Subjt:  KE

A0A1S3B1Q1 ankyrin repeat-containing protein At5g02620-like2.0e-0944.79Show/hide
Query:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH
        +SD HHGI +  D  R SSS QVNV E+++Q  +   ++KTS HK+ ++WA++K H  +    +    EH P H +L E A+RGDWK AEE+EK++
Subjt:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH

A0A5A7UP27 Ankyrin repeat-containing protein2.0e-0944.79Show/hide
Query:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH
        +SD HHGI +  D  R SSS QVNV E+++Q  +   ++KTS HK+ ++WA++K H  +    +    EH P H +L E A+RGDWK AEE+EK++
Subjt:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH

A0A6J1E7M8 uncharacterized protein LOC1114313791.6e-0642.11Show/hide
Query:  NSDGHHGINVI-DEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHPHFRLREGASRGDWKTAEEVEKEH
        +SD +HGI+V  D   +SSS Q N+ EDQ Q    + N+KTS HK+ L  A++K H  +         ++  H +L E A+RGDWKTA  +EK H
Subjt:  NSDGHHGINVI-DEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHPHFRLREGASRGDWKTAEEVEKEH

E5GC67 Ankyrin repeat family protein2.0e-0944.79Show/hide
Query:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH
        +SD HHGI +  D  R SSS QVNV E+++Q  +   ++KTS HK+ ++WA++K H  +    +    EH P H +L E A+RGDWK AEE+EK++
Subjt:  NSDGHHGINV-IDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHP-HFRLREGASRGDWKTAEEVEKEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCATTGACTCCAAAGCCTTCTTCAAATGAATCAGACACTTTCAATAAGCAAATCCTGGAGCTGTTCGGTGGTCGGAATTGGTATACCAATTCCGATGGCCACCA
CGGAATCAATGTCATCGATGAAGCTCGGTCGTCGTCATCAATGCAAGTGAATGTGAACGAGGATCAGAATCAGAATCAGCTTACTGTTGTTAACGAAAAAACGTCAAAAC
ACAAGATTGATCTCCGCTGGGCTAAATCTAAATTTCATGGCTGCAGTAGTGAGTGTGAGCATGAAACCGTGGTGGAGCATCATCCACATTTTCGGCTACGCGAAGGTGCA
AGCAGGGGTGATTGGAAGACTGCAGAAGAAGTAGAAAAGGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCATTGACTCCAAAGCCTTCTTCAAATGAATCAGACACTTTCAATAAGCAAATCCTGGAGCTGTTCGGTGGTCGGAATTGGTATACCAATTCCGATGGCCACCA
CGGAATCAATGTCATCGATGAAGCTCGGTCGTCGTCATCAATGCAAGTGAATGTGAACGAGGATCAGAATCAGAATCAGCTTACTGTTGTTAACGAAAAAACGTCAAAAC
ACAAGATTGATCTCCGCTGGGCTAAATCTAAATTTCATGGCTGCAGTAGTGAGTGTGAGCATGAAACCGTGGTGGAGCATCATCCACATTTTCGGCTACGCGAAGGTGCA
AGCAGGGGTGATTGGAAGACTGCAGAAGAAGTAGAAAAGGAACATTGA
Protein sequenceShow/hide protein sequence
MKPLTPKPSSNESDTFNKQILELFGGRNWYTNSDGHHGINVIDEARSSSSMQVNVNEDQNQNQLTVVNEKTSKHKIDLRWAKSKFHGCSSECEHETVVEHHPHFRLREGA
SRGDWKTAEEVEKEH