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MS027792 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027792
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibose-phosphate pyrophosphokinase 1-like
Genome locationscaffold22:222763..222987
RNA-Seq ExpressionMS027792
SyntenyMS027792
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4099471.1 unnamed protein product [Lactuca saligna]3.3e-0687.18Show/hide
Query:  RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        RSVRTLDP  KEA IR AR+RIEDLEGRQQALRAEQQAL
Subjt:  RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

CAE5979087.1 unnamed protein product [Arabidopsis arenosa]1.6e-0864.79Show/hide
Query:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        MDA NRLSAIA   G                 RSVRTLDPA KEA IR AR+RIEDLEGRQQALRAEQQAL
Subjt:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

GEX80027.1 ribose-phosphate pyrophosphokinase 1-like [Tanacetum cinerariifolium]6.6e-0760.56Show/hide
Query:  MDATNRLSAIACRNGATAKSNSRTPR-------SVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        MDA NRLSAIA   G        + R       SVRTLDP LKEA I  AR+RIEDLEGRQQALRAEQ+ L
Subjt:  MDATNRLSAIACRNGATAKSNSRTPR-------SVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

GFC03515.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Tanacetum cinerariifolium]2.5e-0673.91Show/hide
Query:  KSNSRTPRSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        K ++  PRSVRTLDP LKEA IR AR+RI+DLEGRQQALRAEQ+ L
Subjt:  KSNSRTPRSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

PLY71280.1 hypothetical protein LSAT_0X38260 [Lactuca sativa]4.5e-0863.38Show/hide
Query:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        MDA NRLSAIA   G                 RSVRTLDP  KEA IR AR+RIEDLEGRQQALRAEQQAL
Subjt:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

TrEMBL top hitse value%identityAlignment
A0A0D2LRW8 Uncharacterized protein2.7e-0659.15Show/hide
Query:  MDATNRLSAIACRNGATAKSNSR-------TPRSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        MDA NRLSAIA   G                 RSVRT+DPA KEA IR  R+RIE LE RQQALRAEQQAL
Subjt:  MDATNRLSAIACRNGATAKSNSR-------TPRSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

A0A2J6JM05 Uncharacterized protein4.6e-0659.15Show/hide
Query:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        MD  NRLSAIA   G                 RSVRTLDP  KEA I  AR+ IEDLEGRQQALRAEQQAL
Subjt:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

A0A2J6K863 Uncharacterized protein2.2e-0863.38Show/hide
Query:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        MDA NRLSAIA   G                 RSVRTLDP  KEA IR AR+RIEDLEGRQQALRAEQQAL
Subjt:  MDATNRLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

A0A6S7LWT6 Uncharacterized protein4.6e-0662.12Show/hide
Query:  RLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        RLSAIA   G                 RSVRTLDP  KEA IR AR+RIEDLEGRQQALRAEQQAL
Subjt:  RLSAIACRNGATAKSNSRTP-------RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

A0A6S7NTX4 Uncharacterized protein1.6e-0687.18Show/hide
Query:  RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL
        RSVRTLDP  KEA IR AR+RIEDLEGRQQALRAEQQAL
Subjt:  RSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCTACAAACAGGCTTTCTGCAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGCCTTGAAAGA
AGCGTGCATTCGCGATGCCAGAAAGCGTATCGAGGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGGAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATGTTGG
ATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCTACAAACAGGCTTTCTGCAATTGCTTGCCGAAATGGGGCAACTGCAAAATCAAATTCAAGAACGCCTAGGAGTGTTAGAACACTGGATCCTGCCTTGAAAGA
AGCGTGCATTCGCGATGCCAGAAAGCGTATCGAGGATTTGGAGGGGAGGCAGCAAGCGCTGCGGGCGGAGCAGCAAGCACTCTATTTCATGTTTCTTCAACAAATGTTGG
ATTGA
Protein sequenceShow/hide protein sequence
MDATNRLSAIACRNGATAKSNSRTPRSVRTLDPALKEACIRDARKRIEDLEGRQQALRAEQQALYFMFLQQMLD