; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027793 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027793
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold22:227753..228373
RNA-Seq ExpressionMS027793
SyntenyMS027793
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137024.1 uncharacterized protein LOC111008588 [Momordica charantia]6.9e-1438.36Show/hide
Query:  RGLISPPRSFA----------GSPSRPLADDLHFYMSQSRRPTASSVADPSDHR------------TPPRTRTSQRR-----PTAEKNADDLQNYLKKLD
        RGLISPPRS +          G+P+ P   +   YMS  RRPT +       HR            +PPR R S +      P+   N +DL N  KKLD
Subjt:  RGLISPPRSFA----------GSPSRPLADDLHFYMSQSRRPTASSVADPSDHR------------TPPRTRTSQRR-----PTAEKNADDLQNYLKKLD

Query:  RNNNNSSTKTTAKISSSRPSISP-------RNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQ
               TKTT KI  ++PS SP       RNG  +E  RGPTPIS N  PKPKPA AI S +   S A N+            + S  HL   G  Q  
Subjt:  RNNNNSSTKTTAKISSSRPSISP-------RNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQ

Query:  NINNVGSNGGATHTSLAHPQLNSNLHKLSGDG
        ++ N     G T+T LA PQLN++L +LS DG
Subjt:  NINNVGSNGGATHTSLAHPQLNSNLHKLSGDG

XP_022137505.1 uncharacterized protein LOC111008934 isoform X1 [Momordica charantia]1.2e-2949.54Show/hide
Query:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA
        RGLISPPR+F+G        P RP     ++ MS   RPT  +V +PS     +H     + ++  R T  A  N  DLQN+ KKLD  NNNNSSTKTTA
Subjt:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA

Query:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP
           +    +  RN        G T IS+N AP+PK   A  S     S   +ANLIAPKF DSP+NSSP HLSIHG GQRQNI+NVG+NGG  +TSLAHP
Subjt:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP

Query:  QLNSNLHKLSGDGDGDGE
        QLN++LHKLS  G G  +
Subjt:  QLNSNLHKLSGDGDGDGE

XP_022137506.1 uncharacterized protein LOC111008934 isoform X2 [Momordica charantia]9.0e-3050Show/hide
Query:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA
        RGLISPPR+F+G        P RP     ++ MS   RPT  +V +PS     +H     + ++  R T  A  N  DLQN+ KKLD  NNNNSSTKTTA
Subjt:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA

Query:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP
           +    +  RN        G T IS+N AP+PK   A  S     S   +ANLIAPKF DSP+NSSP HLSIHG GQRQNI+NVG+NGG  +TSLAHP
Subjt:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP

Query:  QLNSNLHKLS--GDGDGDGE
        QLN++LHKLS  G G  DG+
Subjt:  QLNSNLHKLS--GDGDGDGE

XP_022137556.1 uncharacterized protein LOC111008978 [Momordica charantia]3.3e-10197.51Show/hide
Query:  MARGLISPPRSFAGSPSRPLADDLHFYMSQSRRPTASSVADPSDHRTPPRTRTSQRRPTAEKNADDLQNYLKKLDRNNNNSSTKTTAKISSSRPSISPRN
        MARGLISPPRSFAGSPSRPLADDLHFYMSQSRRPTASSVADPSDHRTPPRTRTSQRR TAEKNADDLQNYLKKLDRNNNNSSTKTTAKISSSRPSISPRN
Subjt:  MARGLISPPRSFAGSPSRPLADDLHFYMSQSRRPTASSVADPSDHRTPPRTRTSQRRPTAEKNADDLQNYLKKLDRNNNNSSTKTTAKISSSRPSISPRN

Query:  GLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHPQLNSNLHKLSGDG
        GLEIEQ RGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHG GQRQNINNVGSNGGA+HT LAHPQLNSNLHKLSGDG
Subjt:  GLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHPQLNSNLHKLSGDG

Query:  D
        D
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A6J1C5Z8 uncharacterized protein LOC1110085883.3e-1438.36Show/hide
Query:  RGLISPPRSFA----------GSPSRPLADDLHFYMSQSRRPTASSVADPSDHR------------TPPRTRTSQRR-----PTAEKNADDLQNYLKKLD
        RGLISPPRS +          G+P+ P   +   YMS  RRPT +       HR            +PPR R S +      P+   N +DL N  KKLD
Subjt:  RGLISPPRSFA----------GSPSRPLADDLHFYMSQSRRPTASSVADPSDHR------------TPPRTRTSQRR-----PTAEKNADDLQNYLKKLD

Query:  RNNNNSSTKTTAKISSSRPSISP-------RNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQ
               TKTT KI  ++PS SP       RNG  +E  RGPTPIS N  PKPKPA AI S +   S A N+            + S  HL   G  Q  
Subjt:  RNNNNSSTKTTAKISSSRPSISP-------RNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQ

Query:  NINNVGSNGGATHTSLAHPQLNSNLHKLSGDG
        ++ N     G T+T LA PQLN++L +LS DG
Subjt:  NINNVGSNGGATHTSLAHPQLNSNLHKLSGDG

A0A6J1C6T8 uncharacterized protein LOC111008934 isoform X24.4e-3050Show/hide
Query:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA
        RGLISPPR+F+G        P RP     ++ MS   RPT  +V +PS     +H     + ++  R T  A  N  DLQN+ KKLD  NNNNSSTKTTA
Subjt:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA

Query:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP
           +    +  RN        G T IS+N AP+PK   A  S     S   +ANLIAPKF DSP+NSSP HLSIHG GQRQNI+NVG+NGG  +TSLAHP
Subjt:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP

Query:  QLNSNLHKLS--GDGDGDGE
        QLN++LHKLS  G G  DG+
Subjt:  QLNSNLHKLS--GDGDGDGE

A0A6J1C6U3 uncharacterized protein LOC111008934 isoform X15.7e-3049.54Show/hide
Query:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA
        RGLISPPR+F+G        P RP     ++ MS   RPT  +V +PS     +H     + ++  R T  A  N  DLQN+ KKLD  NNNNSSTKTTA
Subjt:  RGLISPPRSFAG-------SPSRPLADDLHFYMSQSRRPTASSVADPS-----DHRTPPRTRTSQRRPT--AEKNADDLQNYLKKLD-RNNNNSSTKTTA

Query:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP
           +    +  RN        G T IS+N AP+PK   A  S     S   +ANLIAPKF DSP+NSSP HLSIHG GQRQNI+NVG+NGG  +TSLAHP
Subjt:  KISSSRPSISPRNGLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHP

Query:  QLNSNLHKLSGDGDGDGE
        QLN++LHKLS  G G  +
Subjt:  QLNSNLHKLSGDGDGDGE

A0A6J1C6Z1 uncharacterized protein LOC1110089781.6e-10197.51Show/hide
Query:  MARGLISPPRSFAGSPSRPLADDLHFYMSQSRRPTASSVADPSDHRTPPRTRTSQRRPTAEKNADDLQNYLKKLDRNNNNSSTKTTAKISSSRPSISPRN
        MARGLISPPRSFAGSPSRPLADDLHFYMSQSRRPTASSVADPSDHRTPPRTRTSQRR TAEKNADDLQNYLKKLDRNNNNSSTKTTAKISSSRPSISPRN
Subjt:  MARGLISPPRSFAGSPSRPLADDLHFYMSQSRRPTASSVADPSDHRTPPRTRTSQRRPTAEKNADDLQNYLKKLDRNNNNSSTKTTAKISSSRPSISPRN

Query:  GLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHPQLNSNLHKLSGDG
        GLEIEQ RGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHG GQRQNINNVGSNGGA+HT LAHPQLNSNLHKLSGDG
Subjt:  GLEIEQLRGPTPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHPQLNSNLHKLSGDG

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAGGCCTAATCAGTCCCCCGAGATCCTTCGCTGGATCACCCAGTCGTCCCCTCGCTGATGATCTCCACTTTTACATGTCACAGTCCCGGCGGCCCACGGCCTC
GTCGGTGGCCGATCCCTCCGACCACCGGACTCCGCCCAGAACTAGAACTTCCCAGCGGCGGCCCACGGCGGAGAAAAATGCTGACGACCTCCAGAATTATCTGAAGAAAT
TAGACCGCAACAACAACAATTCCAGCACCAAAACCACCGCTAAAATTAGCAGTAGCAGACCATCCATATCCCCGCGTAATGGGCTTGAGATTGAACAACTGCGTGGGCCC
ACACCAATTTCCCACAACGCTGCTCCAAAACCAAAACCAGCCCCAGCCATTGATTCCCCTGCTCCTGATGCTAGTACTGCTAATAACGCCAATCTCATCGCTCCAAAATT
TTTTGATTCTCCACATAATTCTTCTCCCACCCATTTATCCATCCATGGACCGGGTCAACGCCAAAATATTAACAACGTCGGTAGTAACGGTGGAGCCACTCACACTTCAC
TTGCTCATCCTCAACTTAACAGTAACTTACACAAGCTTTCTGGTGACGGTGACGGTGACGGTGAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAGGCCTAATCAGTCCCCCGAGATCCTTCGCTGGATCACCCAGTCGTCCCCTCGCTGATGATCTCCACTTTTACATGTCACAGTCCCGGCGGCCCACGGCCTC
GTCGGTGGCCGATCCCTCCGACCACCGGACTCCGCCCAGAACTAGAACTTCCCAGCGGCGGCCCACGGCGGAGAAAAATGCTGACGACCTCCAGAATTATCTGAAGAAAT
TAGACCGCAACAACAACAATTCCAGCACCAAAACCACCGCTAAAATTAGCAGTAGCAGACCATCCATATCCCCGCGTAATGGGCTTGAGATTGAACAACTGCGTGGGCCC
ACACCAATTTCCCACAACGCTGCTCCAAAACCAAAACCAGCCCCAGCCATTGATTCCCCTGCTCCTGATGCTAGTACTGCTAATAACGCCAATCTCATCGCTCCAAAATT
TTTTGATTCTCCACATAATTCTTCTCCCACCCATTTATCCATCCATGGACCGGGTCAACGCCAAAATATTAACAACGTCGGTAGTAACGGTGGAGCCACTCACACTTCAC
TTGCTCATCCTCAACTTAACAGTAACTTACACAAGCTTTCTGGTGACGGTGACGGTGACGGTGAGTTCTAA
Protein sequenceShow/hide protein sequence
MARGLISPPRSFAGSPSRPLADDLHFYMSQSRRPTASSVADPSDHRTPPRTRTSQRRPTAEKNADDLQNYLKKLDRNNNNSSTKTTAKISSSRPSISPRNGLEIEQLRGP
TPISHNAAPKPKPAPAIDSPAPDASTANNANLIAPKFFDSPHNSSPTHLSIHGPGQRQNINNVGSNGGATHTSLAHPQLNSNLHKLSGDGDGDGEF