; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027794 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027794
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationscaffold22:232215..232964
RNA-Seq ExpressionMS027794
SyntenyMS027794
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137024.1 uncharacterized protein LOC111008588 [Momordica charantia]2.3e-1943.67Show/hide
Query:  MTKRGLISPPRAFSGP------NNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAP------------------PNPYDLQ
        MT RGLISPPR+ S P      NN A NPP RPNY MSP RRPTT    +EQ   +   K   S+ A RAT  +P                  PNP DL 
Subjt:  MTKRGLISPPRAFSGP------NNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAP------------------PNPYDLQ

Query:  NHQKKLDHNNNNNSSTKTTAPPPTRHQRLRNGA------TLISNNTAPRPKG--PTASGSRSDPPDPNLIAPKFSDSANNSSPN--HLSIHGSGQRQNIS
        N QKKLD            + P T+ QRLRNG       T IS NT P+PK     AS SRSD P            A NSSP+  HL   GS Q  ++ 
Subjt:  NHQKKLDHNNNNNSSTKTTAPPPTRHQRLRNGA------TLISNNTAPRPKG--PTASGSRSDPPDPNLIAPKFSDSANNSSPN--HLSIHGSGQRQNIS

Query:  NVGNNGGTTYTSLAHPQLNNHLHKLSRGG
        N     G TYT LA PQLNNHL +LS  G
Subjt:  NVGNNGGTTYTSLAHPQLNNHLHKLSRGG

XP_022137505.1 uncharacterized protein LOC111008934 isoform X1 [Momordica charantia]3.0e-10494.23Show/hide
Query:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
        MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPP RPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
Subjt:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT

Query:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND
        RHQRLRNGATLISNNTAPRPKGPTASGSRSDP D NLIAPKFSDS NNSSPNHLSIHGSGQRQNISNVGNNGGT YTSLAHPQLNNHLHKLSRGGSGGND
Subjt:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND

Query:  GETSYLVY
              +Y
Subjt:  GETSYLVY

XP_022137506.1 uncharacterized protein LOC111008934 isoform X2 [Momordica charantia]1.3e-10492.52Show/hide
Query:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
        MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPP RPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
Subjt:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT

Query:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND
        RHQRLRNGATLISNNTAPRPKGPTASGSRSDP D NLIAPKFSDS NNSSPNHLSIHGSGQRQNISNVGNNGGT YTSLAHPQLNNHLHKLSRGGSGGND
Subjt:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND

Query:  GETSYLVYSXRYNH
        G+    +Y  + +H
Subjt:  GETSYLVYSXRYNH

XP_022137556.1 uncharacterized protein LOC111008978 [Momordica charantia]3.2e-2948.83Show/hide
Query:  RGLISPPRAFSGPNNAAANPPMRP-----NYRMSPPRRPT--TVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTA
        RGLISPPR+F+G        P RP     ++ MS  RRPT  +V +PS+        +    +   +  H A  N  DLQN+ KKLD  NNNNSSTKTTA
Subjt:  RGLISPPRAFSGPNNAAANPPMRP-----NYRMSPPRRPT--TVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTA

Query:  PPPTRHQRL--RN--------GATLISNNTAPRPKGPTASGS----RSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHP
           +    +  RN        G T IS+N AP+PK   A  S     S   + NLIAPKF DS +NSSP HLSIHGSGQRQNI+NVG+NGG ++T LAHP
Subjt:  PPPTRHQRL--RN--------GATLISNNTAPRPKGPTASGS----RSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHP

Query:  QLNNHLHKLSRGG
        QLN++LHKLS  G
Subjt:  QLNNHLHKLSRGG

XP_022137569.1 uncharacterized protein LOC111008986 [Momordica charantia]5.4e-0534.6Show/hide
Query:  MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPRRPTT--VVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKK------LDHNN
        M  RGLISPP++ FS       NNAAANPP  PNY MS  RR T   VVNP +Q       K T  SNAIRAT  + P P  +   +++        + +
Subjt:  MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPRRPTT--VVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKK------LDHNN

Query:  NNNSSTKTTAPPPTRHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQ--NISNVGNNGGTTYTSLAHPQL
        N+NS+TK T    T     RN      N    +P+GPT     S                        S HGSG  Q  N +N+      + T + HP +
Subjt:  NNNSSTKTTAPPPTRHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQ--NISNVGNNGGTTYTSLAHPQL

Query:  NNHLHKLSRGG
         N L +LS  G
Subjt:  NNHLHKLSRGG

TrEMBL top hitse value%identityAlignment
A0A6J1C5Z8 uncharacterized protein LOC1110085881.1e-1943.67Show/hide
Query:  MTKRGLISPPRAFSGP------NNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAP------------------PNPYDLQ
        MT RGLISPPR+ S P      NN A NPP RPNY MSP RRPTT    +EQ   +   K   S+ A RAT  +P                  PNP DL 
Subjt:  MTKRGLISPPRAFSGP------NNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAP------------------PNPYDLQ

Query:  NHQKKLDHNNNNNSSTKTTAPPPTRHQRLRNGA------TLISNNTAPRPKG--PTASGSRSDPPDPNLIAPKFSDSANNSSPN--HLSIHGSGQRQNIS
        N QKKLD            + P T+ QRLRNG       T IS NT P+PK     AS SRSD P            A NSSP+  HL   GS Q  ++ 
Subjt:  NHQKKLDHNNNNNSSTKTTAPPPTRHQRLRNGA------TLISNNTAPRPKG--PTASGSRSDPPDPNLIAPKFSDSANNSSPN--HLSIHGSGQRQNIS

Query:  NVGNNGGTTYTSLAHPQLNNHLHKLSRGG
        N     G TYT LA PQLNNHL +LS  G
Subjt:  NVGNNGGTTYTSLAHPQLNNHLHKLSRGG

A0A6J1C6T8 uncharacterized protein LOC111008934 isoform X26.5e-10592.52Show/hide
Query:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
        MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPP RPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
Subjt:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT

Query:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND
        RHQRLRNGATLISNNTAPRPKGPTASGSRSDP D NLIAPKFSDS NNSSPNHLSIHGSGQRQNISNVGNNGGT YTSLAHPQLNNHLHKLSRGGSGGND
Subjt:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND

Query:  GETSYLVYSXRYNH
        G+    +Y  + +H
Subjt:  GETSYLVYSXRYNH

A0A6J1C6U3 uncharacterized protein LOC111008934 isoform X11.4e-10494.23Show/hide
Query:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
        MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPP RPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT
Subjt:  MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPT

Query:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND
        RHQRLRNGATLISNNTAPRPKGPTASGSRSDP D NLIAPKFSDS NNSSPNHLSIHGSGQRQNISNVGNNGGT YTSLAHPQLNNHLHKLSRGGSGGND
Subjt:  RHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGND

Query:  GETSYLVY
              +Y
Subjt:  GETSYLVY

A0A6J1C6Z1 uncharacterized protein LOC1110089781.5e-2948.83Show/hide
Query:  RGLISPPRAFSGPNNAAANPPMRP-----NYRMSPPRRPT--TVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTA
        RGLISPPR+F+G        P RP     ++ MS  RRPT  +V +PS+        +    +   +  H A  N  DLQN+ KKLD  NNNNSSTKTTA
Subjt:  RGLISPPRAFSGPNNAAANPPMRP-----NYRMSPPRRPT--TVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTA

Query:  PPPTRHQRL--RN--------GATLISNNTAPRPKGPTASGS----RSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHP
           +    +  RN        G T IS+N AP+PK   A  S     S   + NLIAPKF DS +NSSP HLSIHGSGQRQNI+NVG+NGG ++T LAHP
Subjt:  PPPTRHQRL--RN--------GATLISNNTAPRPKGPTASGS----RSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHP

Query:  QLNNHLHKLSRGG
        QLN++LHKLS  G
Subjt:  QLNNHLHKLSRGG

A0A6J1C7L7 uncharacterized protein LOC1110089862.6e-0534.6Show/hide
Query:  MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPRRPTT--VVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKK------LDHNN
        M  RGLISPP++ FS       NNAAANPP  PNY MS  RR T   VVNP +Q       K T  SNAIRAT  + P P  +   +++        + +
Subjt:  MTKRGLISPPRA-FS-----GPNNAAANPPMRPNYRMSPPRRPTT--VVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKK------LDHNN

Query:  NNNSSTKTTAPPPTRHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQ--NISNVGNNGGTTYTSLAHPQL
        N+NS+TK T    T     RN      N    +P+GPT     S                        S HGSG  Q  N +N+      + T + HP +
Subjt:  NNNSSTKTTAPPPTRHQRLRNGATLISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQ--NISNVGNNGGTTYTSLAHPQL

Query:  NNHLHKLSRGG
         N L +LS  G
Subjt:  NNHLHKLSRGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAGAGAGGCCTAATCAGTCCCCCGAGAGCCTTTTCTGGACCAAACAATGCCGCCGCAAATCCGCCGATGAGGCCCAATTACAGGATGTCACCACCCCGCCGACC
CACGACGGTGGTCAATCCCAGCGAGCAGATGTTTTACGAGCATTGGTTAAAAGCCACTTCTAGTTCTAATGCCATACGTGCAACCCATATCGCTCCGCCAAATCCTTACG
ATCTGCAGAATCATCAGAAGAAACTAGACCACAACAACAACAACAATTCCAGCACCAAAACCACAGCGCCCCCTCCAACTCGCCACCAGAGGCTGCGTAATGGGGCCACG
CTAATTTCCAACAACACTGCTCCAAGACCAAAAGGACCCACTGCTTCAGGTTCCAGATCCGATCCCCCTGACCCCAATCTGATCGCTCCAAAATTTTCTGATTCTGCAAA
TAATTCTTCTCCCAACCATTTATCCATCCATGGATCGGGTCAACGCCAAAATATCAGCAACGTCGGTAATAACGGTGGAACCACTTATACTTCACTTGCTCATCCTCAAC
TTAACAATCACTTACACAAGCTTTCTAGAGGCGGAAGCGGTGGCAATGACGGTGAGACTTCTTACCTTGTATATTCTTAAAGATACAACCATTGAAAACAAAACAACTTT
AAAAAGATTTATAATAAAGGTAGACTACTATGGTAATTGCAAATTGGTTTTGAAATCCATCAATATTCATATAGGTCAATTATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAGAGAGGCCTAATCAGTCCCCCGAGAGCCTTTTCTGGACCAAACAATGCCGCCGCAAATCCGCCGATGAGGCCCAATTACAGGATGTCACCACCCCGCCGACC
CACGACGGTGGTCAATCCCAGCGAGCAGATGTTTTACGAGCATTGGTTAAAAGCCACTTCTAGTTCTAATGCCATACGTGCAACCCATATCGCTCCGCCAAATCCTTACG
ATCTGCAGAATCATCAGAAGAAACTAGACCACAACAACAACAACAATTCCAGCACCAAAACCACAGCGCCCCCTCCAACTCGCCACCAGAGGCTGCGTAATGGGGCCACG
CTAATTTCCAACAACACTGCTCCAAGACCAAAAGGACCCACTGCTTCAGGTTCCAGATCCGATCCCCCTGACCCCAATCTGATCGCTCCAAAATTTTCTGATTCTGCAAA
TAATTCTTCTCCCAACCATTTATCCATCCATGGATCGGGTCAACGCCAAAATATCAGCAACGTCGGTAATAACGGTGGAACCACTTATACTTCACTTGCTCATCCTCAAC
TTAACAATCACTTACACAAGCTTTCTAGAGGCGGAAGCGGTGGCAATGACGGTGAGACTTCTTACCTTGTATATTCTTAAAGATACAACCATTGAAAACAAAACAACTTT
AAAAAGATTTATAATAAAGGTAGACTACTATGGTAATTGCAAATTGGTTTTGAAATCCATCAATATTCATATAGGTCAATTATTCCATAA
Protein sequenceShow/hide protein sequence
MTKRGLISPPRAFSGPNNAAANPPMRPNYRMSPPRRPTTVVNPSEQMFYEHWLKATSSSNAIRATHIAPPNPYDLQNHQKKLDHNNNNNSSTKTTAPPPTRHQRLRNGAT
LISNNTAPRPKGPTASGSRSDPPDPNLIAPKFSDSANNSSPNHLSIHGSGQRQNISNVGNNGGTTYTSLAHPQLNNHLHKLSRGGSGGNDGETSYLVYSURYNHUKQNNF
KKIYNKGRLLWULQIGFEIHQYSYRSIIP