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MS027795 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027795
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationscaffold22:234958..235506
RNA-Seq ExpressionMS027795
SyntenyMS027795
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137024.1 uncharacterized protein LOC111008588 [Momordica charantia]3.4e-1238.91Show/hide
Query:  RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNG
        RGLISPP+SR S  +    NN A NPPS PNYMS  RR T A     +Q   TH KP+  + A RATK S      SPKPT P+VPSRR     PN  + 
Subjt:  RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNG

Query:  HNDNSTTKLTTAKITTSRNSNV--------NGVQQQPRGPTLIS------------VASGS-----------------SHGSGHHQDANNNNIEGEEEDS
        HN       TT KI  ++ S+         NGV + PRGPT IS            +AS S                 S GS  H D  N++       +
Subjt:  HNDNSTTKLTTAKITTSRNSNV--------NGVQQQPRGPTLIS------------VASGS-----------------SHGSGHHQDANNNNIEGEEEDS

Query:  TTVIGHPHVINQLQQLSIDGE
         T +  P + N LQ+LSIDG+
Subjt:  TTVIGHPHVINQLQQLSIDGE

XP_022137505.1 uncharacterized protein LOC111008934 isoform X1 [Momordica charantia]3.4e-0434.12Show/hide
Query:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH
        M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q       K T  SNAIRAT  + P P  +   +++        + +
Subjt:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH

Query:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV
        N+NS+TK T    T     RN      N    +P+GPT     S                        S HGSG  Q  N +N+      + T + HP +
Subjt:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV

Query:  INQLQQLSIDG
         N L +LS  G
Subjt:  INQLQQLSIDG

XP_022137506.1 uncharacterized protein LOC111008934 isoform X2 [Momordica charantia]3.4e-0434.12Show/hide
Query:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH
        M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q       K T  SNAIRAT  + P P  +   +++        + +
Subjt:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH

Query:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV
        N+NS+TK T    T     RN      N    +P+GPT     S                        S HGSG  Q  N +N+      + T + HP +
Subjt:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV

Query:  INQLQQLSIDG
         N L +LS  G
Subjt:  INQLQQLSIDG

XP_022137569.1 uncharacterized protein LOC111008986 [Momordica charantia]2.8e-9198.89Show/hide
Query:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN
        MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN
Subjt:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN

Query:  STTKLTTAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE
        STTKLT AKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDG+
Subjt:  STTKLTTAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE

TrEMBL top hitse value%identityAlignment
A0A6J1C5Z8 uncharacterized protein LOC1110085881.6e-1238.91Show/hide
Query:  RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNG
        RGLISPP+SR S  +    NN A NPPS PNYMS  RR T A     +Q   TH KP+  + A RATK S      SPKPT P+VPSRR     PN  + 
Subjt:  RGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNS------SPKPT-PVVPSRRRPTWAPNNPNG

Query:  HNDNSTTKLTTAKITTSRNSNV--------NGVQQQPRGPTLIS------------VASGS-----------------SHGSGHHQDANNNNIEGEEEDS
        HN       TT KI  ++ S+         NGV + PRGPT IS            +AS S                 S GS  H D  N++       +
Subjt:  HNDNSTTKLTTAKITTSRNSNV--------NGVQQQPRGPTLIS------------VASGS-----------------SHGSGHHQDANNNNIEGEEEDS

Query:  TTVIGHPHVINQLQQLSIDGE
         T +  P + N LQ+LSIDG+
Subjt:  TTVIGHPHVINQLQQLSIDGE

A0A6J1C6T8 uncharacterized protein LOC111008934 isoform X21.6e-0434.12Show/hide
Query:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH
        M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q       K T  SNAIRAT  + P P  +   +++        + +
Subjt:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH

Query:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV
        N+NS+TK T    T     RN      N    +P+GPT     S                        S HGSG  Q  N +N+      + T + HP +
Subjt:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV

Query:  INQLQQLSIDG
         N L +LS  G
Subjt:  INQLQQLSIDG

A0A6J1C6U3 uncharacterized protein LOC111008934 isoform X11.6e-0434.12Show/hide
Query:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH
        M  RGLISPP++ FS       NNAAANPP  PNY MS   R T   VVNP +Q       K T  SNAIRAT  + P P  +   +++        + +
Subjt:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNY-MSATRRSTAARVVNPKQQQTTH--TKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGH

Query:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV
        N+NS+TK T    T     RN      N    +P+GPT     S                        S HGSG  Q  N +N+      + T + HP +
Subjt:  NDNSTTKLTTAKITTS---RNSNV---NGVQQQPRGPTLISVASG-----------------------SSHGSGHHQDANNNNIEGEEEDSTTVIGHPHV

Query:  INQLQQLSIDG
         N L +LS  G
Subjt:  INQLQQLSIDG

A0A6J1C7L7 uncharacterized protein LOC1110089861.3e-9198.89Show/hide
Query:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN
        MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN
Subjt:  MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN

Query:  STTKLTTAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE
        STTKLT AKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDG+
Subjt:  STTKLTTAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGE

A0A6J1K179 sporozoite surface protein 2-like6.2e-0436.88Show/hide
Query:  RGLISPPKSRFSVTES-DSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQT--THTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN
        RG+ISPP+SR S  ES    NN A NPPS PNYMS  RR T    +NP + +T     +PT      + T  SS  P  + PSR      P+ P   + N
Subjt:  RGLISPPKSRFSVTES-DSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQT--THTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDN

Query:  STTKLTTAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGS
           KL T   TT+R S+    +     P+  +V   +  GS
Subjt:  STTKLTTAKITTSRNSNVNGVQQQPRGPTLISVASGSSHGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTC
AGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTT
CGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGACCGCTAAAATT
ACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACGCTAATTTCCGTTGCTTCCGGTTCCAGCCATGGATCGGGTCATCACCAAGATGC
GAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGCCGAGGCCTAATCAGTCCCCCGAAAAGCCGATTTTCTGTCACAGAATCCGACTCACAAAATAATGCCGCCGCCAATCCGCCGTCGATGCCCAATTACATGTC
AGCAACCCGGCGATCCACGGCGGCGAGGGTGGTCAATCCCAAACAGCAGCAGACCACTCACACAAAACCCACTTTTGGTTCTAATGCTATTCGTGCAACCAAAAACAGTT
CGCCAAAACCCACCCCCGTCGTGCCTTCCCGGCGGCGGCCCACATGGGCGCCAAATAATCCTAACGGCCACAACGACAATTCCACCACCAAATTAACGACCGCTAAAATT
ACCACAAGTAGAAACTCGAACGTTAATGGAGTTCAACAACAACCGCGTGGGCCAACGCTAATTTCCGTTGCTTCCGGTTCCAGCCATGGATCGGGTCATCACCAAGATGC
GAACAACAATAACATTGAAGGCGAAGAAGAAGATTCTACTACAGTGATCGGTCATCCTCATGTTATCAATCAATTACAACAGCTTTCTATAGACGGTGAGCTTATATAA
Protein sequenceShow/hide protein sequence
MRGRGLISPPKSRFSVTESDSQNNAAANPPSMPNYMSATRRSTAARVVNPKQQQTTHTKPTFGSNAIRATKNSSPKPTPVVPSRRRPTWAPNNPNGHNDNSTTKLTTAKI
TTSRNSNVNGVQQQPRGPTLISVASGSSHGSGHHQDANNNNIEGEEEDSTTVIGHPHVINQLQQLSIDGELI