; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027796 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027796
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
Genome locationscaffold22:237814..239578
RNA-Seq ExpressionMS027796
SyntenyMS027796
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573173.1 hypothetical protein SDJN03_27060, partial [Cucurbita argyrosperma subsp. sororia]8.7e-1736.97Show/hide
Query:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH
        +RG+ISPPRSRSSPR+ RP +NNGA NPPSRPNYMSPRRRPTT       +THRK P  T  +   K      +PPRI PS +P + + PSR   P+   
Subjt:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  NQKKLDTKTTPK----IGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PY
        N++KLDTKT PK        +P+ P T P    NG    +G                A  S SRSD   A  S S K  P +  S + +D ++      Y
Subjt:  NQKKLDTKTTPK----IGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PY

Query:  SGGTY--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF
        S G+Y    L+DP ++  L +LS+D               E +A++  E +   Q + SS  +   I++E+  + + N  I S+
Subjt:  SGGTY--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF

KAG7012356.1 hypothetical protein SDJN02_25108, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-1736.97Show/hide
Query:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH
        +RG+ISPPRSRSSPR+ RP +NNGA NPPSRPNYMSPRRRPTT       +THRK P  T  +   K      +PPRI PS +P + + PSR   P+   
Subjt:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  NQKKLDTKTTPK----IGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PY
        N++KLDTKT PK        +P+ P T P    NG    +G                A  S SRSD   A  S S K  P +  S + +D ++      Y
Subjt:  NQKKLDTKTTPK----IGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PY

Query:  SGGTY--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF
        S G+Y    L+DP ++  L +LS+D               E +A++  E +   Q + SS  +   I++E+  + + N  I S+
Subjt:  SGGTY--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF

XP_022137024.1 uncharacterized protein LOC111008588 [Momordica charantia]2.3e-12665.6Show/hide
Query:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDT
        MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDT
Subjt:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDT

Query:  KTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGTYTPLADPQLNN
        KTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGTYTPLADPQLNN
Subjt:  KTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGTYTPLADPQLNN

Query:  HLQRLSID--------------------------------------------------------------------------------------------
        HLQRLSID                                                                                            
Subjt:  HLQRLSID--------------------------------------------------------------------------------------------

Query:  ------------------------------------------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSFPNESLLID
                                                        EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSFPNESLLID
Subjt:  ------------------------------------------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSFPNESLLID

Query:  LGSPVRC
        LGSPVRC
Subjt:  LGSPVRC

XP_022954810.1 serine/arginine repetitive matrix protein 1-like [Cucurbita moschata]4.3e-1638.21Show/hide
Query:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH
        +RG+ISPPRSRSSPR+ RP +NNGA NPPSRPNYMSPRRRPTT       +THRK P  T  +   K      +PPRI PS +P + + PSR   P+   
Subjt:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  NQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PYSGGT
        N++KLDTKT PK    + SSPR           P +  TP SK+         A  S SRSD   A  S S K  P +  S + +D ++      YS G+
Subjt:  NQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PYSGGT

Query:  Y--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF
        Y    L+DP ++  L +LS+D               E +A++  E +   Q + SS  +   I++E+  + + N  I S+
Subjt:  Y--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF

XP_023542694.1 uncharacterized protein LOC111802521 [Cucurbita pepo subsp. pepo]2.3e-1737.32Show/hide
Query:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH
        +RG+ISPPRSRSSPR+ RP +NNGA NPPSRPNYMSPRRRPTT       +THRK P  T  +   K      +PPRI PS +P + +VPSR   P+   
Subjt:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  NQKKLDTKTTPK----IGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PY
        N++KLDTKT PK        +P+ P T P    NG    +G                A  S SRSD   A  S S K  P +  S + +D ++      Y
Subjt:  NQKKLDTKTTPK----IGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PY

Query:  SGGTY--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF
        S G+Y    L+DP ++  L +LS+D               E +A++  E +   Q + SS  +   I++E+  + + N  I S+
Subjt:  SGGTY--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF

TrEMBL top hitse value%identityAlignment
A0A6J1C5Z8 uncharacterized protein LOC1110085881.1e-12665.6Show/hide
Query:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDT
        MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDT
Subjt:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDT

Query:  KTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGTYTPLADPQLNN
        KTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGTYTPLADPQLNN
Subjt:  KTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGTYTPLADPQLNN

Query:  HLQRLSID--------------------------------------------------------------------------------------------
        HLQRLSID                                                                                            
Subjt:  HLQRLSID--------------------------------------------------------------------------------------------

Query:  ------------------------------------------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSFPNESLLID
                                                        EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSFPNESLLID
Subjt:  ------------------------------------------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSFPNESLLID

Query:  LGSPVRC
        LGSPVRC
Subjt:  LGSPVRC

A0A6J1C6T8 uncharacterized protein LOC111008934 isoform X28.7e-1542.41Show/hide
Query:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNY-MSPRRRPTT----AEQQHTQTHRK--PSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLH
        MT RGLISPPR+ S P      NN A NPP RPNY MSP  RPTT    +EQ   +   K   S+ A RAT  +P                  PNP DL 
Subjt:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNY-MSPRRRPTT----AEQQHTQTHRK--PSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  N-QKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSD-------SPAANSSP---SSKHLPSPGSAQHHDMKNH
        N QKKLD            + P T+ QRLRNG       T IS NT P+PK     AS SRSD       +P  + SP   S  HL   GS Q  ++ N 
Subjt:  N-QKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSD-------SPAANSSP---SSKHLPSPGSAQHHDMKNH

Query:  SPYSGGTYTPLADPQLNNHLQRLS
            G  YT LA PQLNNHL +LS
Subjt:  SPYSGGTYTPLADPQLNNHLQRLS

A0A6J1C6U3 uncharacterized protein LOC111008934 isoform X18.7e-1542.41Show/hide
Query:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNY-MSPRRRPTT----AEQQHTQTHRK--PSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLH
        MT RGLISPPR+ S P      NN A NPP RPNY MSP  RPTT    +EQ   +   K   S+ A RAT  +P                  PNP DL 
Subjt:  MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNY-MSPRRRPTT----AEQQHTQTHRK--PSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  N-QKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSD-------SPAANSSP---SSKHLPSPGSAQHHDMKNH
        N QKKLD            + P T+ QRLRNG       T IS NT P+PK     AS SRSD       +P  + SP   S  HL   GS Q  ++ N 
Subjt:  N-QKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSD-------SPAANSSP---SSKHLPSPGSAQHHDMKNH

Query:  SPYSGGTYTPLADPQLNNHLQRLS
            G  YT LA PQLNNHL +LS
Subjt:  SPYSGGTYTPLADPQLNNHLQRLS

A0A6J1GTG4 serine/arginine repetitive matrix protein 1-like2.1e-1638.21Show/hide
Query:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH
        +RG+ISPPRSRSSPR+ RP +NNGA NPPSRPNYMSPRRRPTT       +THRK P  T  +   K      +PPRI PS +P + + PSR   P+   
Subjt:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  NQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PYSGGT
        N++KLDTKT PK    + SSPR           P +  TP SK+         A  S SRSD   A  S S K  P +  S + +D ++      YS G+
Subjt:  NQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLP-SPGSAQHHDMKNHS---PYSGGT

Query:  Y--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF
        Y    L+DP ++  L +LS+D               E +A++  E +   Q + SS  +   I++E+  + + N  I S+
Subjt:  Y--TPLADPQLNNHLQRLSID---------------EMVAAKVMENKWLLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSF

A0A6J1K179 sporozoite surface protein 2-like1.1e-1438.3Show/hide
Query:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH
        +RG+ISPPRSRSSPR+ RP +NNGA NPPS+PNYMSPRRRPTT       +THRK P  T  +   K      +PPRI PS +P + +VPSR   P+   
Subjt:  LRGLISPPRSRSSPRDFRP-HNNGAPNPPSRPNYMSPRRRPTT-AEQQHTQTHRK-PSATATRATKK------SPPRIRPSPKPTAPIVPSRRPNPNDLH

Query:  NQKKLD--TKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSD----SPAANSSPSSKHLPSPGSAQHHDMKNHSPYSG
        N+KKLD  TKTT +    +P+ P T              P P   N         A  S SRSD     P+ +   S K+L S   +   D +    YS 
Subjt:  NQKKLD--TKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSD----SPAANSSPSSKHLPSPGSAQHHDMKNHSPYSG

Query:  GTY--TPLADPQLNNHLQRLSIDEMVAAKVMENKW
        G+Y    L+DP   +++  L +  ++        W
Subjt:  GTY--TPLADPQLNNHLQRLSIDEMVAAKVMENKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTGAGAGGCCTAATCAGTCCTCCAAGATCCAGATCTTCTCCCAGAGATTTCAGACCGCACAATAATGGCGCCCCAAATCCGCCGTCGAGGCCCAATTACATGTC
ACCACGCCGCCGGCCCACCACGGCGGAGCAGCAGCACACTCAGACTCACAGAAAACCCAGTGCCACTGCTACACGTGCAACCAAAAAAAGTCCGCCCAGAATCAGACCTT
CACCGAAACCCACTGCTCCCATCGTGCCTTCCCGGCGGCCAAATCCTAACGATCTGCACAATCAGAAGAAATTAGACACCAAAACGACGCCTAAAATTGGCGGTGCTAAA
CCATCGTCCCCTCGTACTCAGCCGCAGAGGCTGCGTAATGGGGTTGAACCACCGCGTGGGCCCACACCAATTTCCAAGAACACTACTCCAAAGCCAAAACCAGCCATAGC
CATTGCTTCTGCTTCCAGATCCGATTCTCCTGCTGCTAATTCTTCTCCCAGCTCCAAGCATTTACCCAGCCCTGGATCGGCTCAACACCATGATATGAAGAATCACAGCC
CTTATTCCGGCGGAACTTACACTCCACTTGCCGATCCTCAACTTAACAATCACTTGCAACGCCTTTCTATAGACGAAATGGTTGCTGCAAAAGTAATGGAAAACAAGTGG
CTTCTTCAGAATGATCAGTCGAGTAATGGTTATGATGATGGTATTCATGAAGAAGTTAATGGCAACACTGAAGATAATGTCGAAATTCCCAGCTTCCCAAATGAGTCATT
GCTCATAGATCTTGGCTCTCCTGTGCGATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTGAGAGGCCTAATCAGTCCTCCAAGATCCAGATCTTCTCCCAGAGATTTCAGACCGCACAATAATGGCGCCCCAAATCCGCCGTCGAGGCCCAATTACATGTC
ACCACGCCGCCGGCCCACCACGGCGGAGCAGCAGCACACTCAGACTCACAGAAAACCCAGTGCCACTGCTACACGTGCAACCAAAAAAAGTCCGCCCAGAATCAGACCTT
CACCGAAACCCACTGCTCCCATCGTGCCTTCCCGGCGGCCAAATCCTAACGATCTGCACAATCAGAAGAAATTAGACACCAAAACGACGCCTAAAATTGGCGGTGCTAAA
CCATCGTCCCCTCGTACTCAGCCGCAGAGGCTGCGTAATGGGGTTGAACCACCGCGTGGGCCCACACCAATTTCCAAGAACACTACTCCAAAGCCAAAACCAGCCATAGC
CATTGCTTCTGCTTCCAGATCCGATTCTCCTGCTGCTAATTCTTCTCCCAGCTCCAAGCATTTACCCAGCCCTGGATCGGCTCAACACCATGATATGAAGAATCACAGCC
CTTATTCCGGCGGAACTTACACTCCACTTGCCGATCCTCAACTTAACAATCACTTGCAACGCCTTTCTATAGACGAAATGGTTGCTGCAAAAGTAATGGAAAACAAGTGG
CTTCTTCAGAATGATCAGTCGAGTAATGGTTATGATGATGGTATTCATGAAGAAGTTAATGGCAACACTGAAGATAATGTCGAAATTCCCAGCTTCCCAAATGAGTCATT
GCTCATAGATCTTGGCTCTCCTGTGCGATGTTGA
Protein sequenceShow/hide protein sequence
MTLRGLISPPRSRSSPRDFRPHNNGAPNPPSRPNYMSPRRRPTTAEQQHTQTHRKPSATATRATKKSPPRIRPSPKPTAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAK
PSSPRTQPQRLRNGVEPPRGPTPISKNTTPKPKPAIAIASASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGTYTPLADPQLNNHLQRLSIDEMVAAKVMENKW
LLQNDQSSNGYDDGIHEEVNGNTEDNVEIPSFPNESLLIDLGSPVRC