; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027829 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027829
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCDT1-like protein b
Genome locationscaffold22:1768442..1769794
RNA-Seq ExpressionMS027829
SyntenyMS027829
Gene Ontology termsGO:0007049 - cell cycle (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137298.1 CDT1-like protein b [Momordica charantia]3.4e-8290.96Show/hide
Query:  ADLLKSSDRGVVKNEAEV--------RKKCPGVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGPGVVKNQAEAEQEEIDLLKNSGEGVVK
        +DLLKSSDRGVVKNEAEV        +   PGVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGPGVVKNQAEAEQEEIDLLKNSG GVVK
Subjt:  ADLLKSSDRGVVKNEAEV--------RKKCPGVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGPGVVKNQAEAEQEEIDLLKNSGEGVVK

Query:  NQPEVEQEDIDLKNSGPGGVKNQSEVKEEEIVLFQNQNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQPEQEEM
        NQPEVEQEDI LKNSGPGGVKNQ EVKEEEIVLFQNQNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQPEQEE+
Subjt:  NQPEVEQEDIDLKNSGPGGVKNQSEVKEEEIVLFQNQNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQPEQEEM
TrEMBL top hitse value%identityAlignment
A0A139IKU3 PRODH domain-containing protein5.2e-0428.89Show/hide
Query:  LKSSDRGVVKNEAEVRKKCP-GVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGP-GVVKNQAEAEQEEIDLLKNSGEGVVKNQPEVEQED
        +K  +  VV+   E++   P GV +++PEV  E ++L  +   G  +++PEV +E ++LKN+ P    + + EA +E ++L  +   G  +++PEV +E 
Subjt:  LKSSDRGVVKNEAEVRKKCP-GVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGP-GVVKNQAEAEQEEIDLLKNSGEGVVKNQPEVEQED

Query:  IDLKNSGPGGVKNQSEVKEEEIVLFQN------QNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQP
        ++LKNS P G K       EE++  +N      +    EVV   +E +     D++    E+  TDLL  +     K +P
Subjt:  IDLKNSGPGGVKNQSEVKEEEIVLFQN------QNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQP
A0A6J1C9Y5 CDT1-like protein b1.6e-8290.96Show/hide
Query:  ADLLKSSDRGVVKNEAEV--------RKKCPGVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGPGVVKNQAEAEQEEIDLLKNSGEGVVK
        +DLLKSSDRGVVKNEAEV        +   PGVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGPGVVKNQAEAEQEEIDLLKNSG GVVK
Subjt:  ADLLKSSDRGVVKNEAEV--------RKKCPGVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGPGVVKNQAEAEQEEIDLLKNSGEGVVK

Query:  NQPEVEQEDIDLKNSGPGGVKNQSEVKEEEIVLFQNQNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQPEQEEM
        NQPEVEQEDI LKNSGPGGVKNQ EVKEEEIVLFQNQNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQPEQEE+
Subjt:  NQPEVEQEDIDLKNSGPGGVKNQSEVKEEEIVLFQNQNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQPEQEEM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTGCGATTGAATCGTTTTGCCTTCGTTTCGTTCTGAATCGTAGGATGCGATGTGCTGATCTTCTGAAGAGCTCAGATCGAGGAGTTGTGAAGAATGAAGCAGA
AGTCAGGAAGAAATGTCCAGGAGTTGTGAAGAATCAACCAGAAGTTGAACATGAAGAAATTGATCTTATTAAGAACTCATGTGGAGGAGTTGTGAAGAATCAACCAGAAG
TCGAACAGGAAGATATTGATCTTAAGAACTCAGGTCCAGGAGTTGTGAAGAATCAAGCAGAAGCTGAACAGGAAGAAATTGATCTTCTTAAGAACTCAGGTGAAGGAGTT
GTGAAGAATCAACCAGAAGTTGAACAGGAAGATATTGATCTTAAGAACTCAGGTCCAGGAGGTGTGAAGAATCAATCAGAAGTCAAAGAGGAAGAAATCGTTCTCTTTCA
GAATCAGAACTCAGGTCAAGAAGTTGTGAACAATCGACTAGAATTTGAACAGGAAGAAGAAACTGATCTTCAGAATCAGAACTGTGAACACGAAGAAACTGATCTTCTTC
AGAACTCTGGTCAAGAAGTTTTGAAGAATCAACCAGAACAGGAAGAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTGCGATTGAATCGTTTTGCCTTCGTTTCGTTCTGAATCGTAGGATGCGATGTGCTGATCTTCTGAAGAGCTCAGATCGAGGAGTTGTGAAGAATGAAGCAGA
AGTCAGGAAGAAATGTCCAGGAGTTGTGAAGAATCAACCAGAAGTTGAACATGAAGAAATTGATCTTATTAAGAACTCATGTGGAGGAGTTGTGAAGAATCAACCAGAAG
TCGAACAGGAAGATATTGATCTTAAGAACTCAGGTCCAGGAGTTGTGAAGAATCAAGCAGAAGCTGAACAGGAAGAAATTGATCTTCTTAAGAACTCAGGTGAAGGAGTT
GTGAAGAATCAACCAGAAGTTGAACAGGAAGATATTGATCTTAAGAACTCAGGTCCAGGAGGTGTGAAGAATCAATCAGAAGTCAAAGAGGAAGAAATCGTTCTCTTTCA
GAATCAGAACTCAGGTCAAGAAGTTGTGAACAATCGACTAGAATTTGAACAGGAAGAAGAAACTGATCTTCAGAATCAGAACTGTGAACACGAAGAAACTGATCTTCTTC
AGAACTCTGGTCAAGAAGTTTTGAAGAATCAACCAGAACAGGAAGAAATGTGA
Protein sequenceShow/hide protein sequence
MKFAIESFCLRFVLNRRMRCADLLKSSDRGVVKNEAEVRKKCPGVVKNQPEVEHEEIDLIKNSCGGVVKNQPEVEQEDIDLKNSGPGVVKNQAEAEQEEIDLLKNSGEGV
VKNQPEVEQEDIDLKNSGPGGVKNQSEVKEEEIVLFQNQNSGQEVVNNRLEFEQEEETDLQNQNCEHEETDLLQNSGQEVLKNQPEQEEM