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MS027891 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027891
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationscaffold211:232626..233084
RNA-Seq ExpressionMS027891
SyntenyMS027891
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045847.1 B3 domain-containing transcription factor VRN1-like [Cucumis melo var. makuwa]4.7e-0564.71Show/hide
Query:  LAEKLRGEIPEGIGGCEAGGRRREDLERVVRRAVGVHAAADGAESRLEELR
        LA+ L GEI +GI G EAGG R  DLE VVR AVGV+ AA+G E RLEE+R
Subjt:  LAEKLRGEIPEGIGGCEAGGRRREDLERVVRRAVGVHAAADGAESRLEELR
TrEMBL top hitse value%identityAlignment
A0A5A7TVE2 B3 domain-containing transcription factor VRN1-like2.3e-0564.71Show/hide
Query:  LAEKLRGEIPEGIGGCEAGGRRREDLERVVRRAVGVHAAADGAESRLEELR
        LA+ L GEI +GI G EAGG R  DLE VVR AVGV+ AA+G E RLEE+R
Subjt:  LAEKLRGEIPEGIGGCEAGGRRREDLERVVRRAVGVHAAADGAESRLEELR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTGTCGATTCAGCCTCAAATCACAGAAGCGGCGGACGATTCAGTCCAGAATCGATGCGACCAGAGCAACCTCCAAGGATTCCGCAGCCATTAACAGAGAATC
AAGAGCGGCTTCTGAGGAGAGCGAGTGCGTTCAAATTCGCGACGCGGAATCCTTCATTCATGGTGACGATGAGGCCATCGTACATCCAAACAGGAAATTATCTGAGCTTG
CCGAGAAGCTTCGCGGAGAGATACCTGAAGGAATCGGTGGATGTGAAGCTGGAGGCCGCCGACGGGAGGATTTGGAGCGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCG
GCGGCGGACGGAGCTGAAAGCCGGCTGGAAGAACTTCGCGGTGGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTTGTCGATTCAGCCTCAAATCACAGAAGCGGCGGACGATTCAGTCCAGAATCGATGCGACCAGAGCAACCTCCAAGGATTCCGCAGCCATTAACAGAGAATC
AAGAGCGGCTTCTGAGGAGAGCGAGTGCGTTCAAATTCGCGACGCGGAATCCTTCATTCATGGTGACGATGAGGCCATCGTACATCCAAACAGGAAATTATCTGAGCTTG
CCGAGAAGCTTCGCGGAGAGATACCTGAAGGAATCGGTGGATGTGAAGCTGGAGGCCGCCGACGGGAGGATTTGGAGCGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCG
GCGGCGGACGGAGCTGAAAGCCGGCTGGAAGAACTTCGCGGTGGAGAATGA
Protein sequenceShow/hide protein sequence
MNSCRFSLKSQKRRTIQSRIDATRATSKDSAAINRESRAASEESECVQIRDAESFIHGDDEAIVHPNRKLSELAEKLRGEIPEGIGGCEAGGRRREDLERVVRRAVGVHA
AADGAESRLEELRGGE