; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027930 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027930
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationscaffold375:1469250..1469549
RNA-Seq ExpressionMS027930
SyntenyMS027930
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006423536.1 auxin-responsive protein SAUR21 [Citrus clementina]3.1e-2865.98Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

XP_015577284.1 auxin-responsive protein SAUR21-like [Ricinus communis]2.6e-2763.92Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MG+RL  AIL K++L+  +L+  +A S S EVPKGF AVYV ++ RKR+++P+SYLKQPSFQ LL++AEEEFGF HPMG LTIPC ED FI+VTS+L
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

XP_022146160.1 auxin-responsive protein SAUR21-like [Momordica charantia]6.0e-48100Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH
        MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH

XP_024957863.1 auxin-responsive protein SAUR21-like [Citrus sinensis]3.1e-2865.98Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

XP_031285049.1 auxin-responsive protein SAUR21-like [Pistacia vera]1.1e-2867.01Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MGIR+   IL K+VL   + + ++ +STSL+VPKGFFAVYV E+ +KR+VVP+SYL QP FQDLL +AEEEFGF HPMG LTIPC EDTFI+VTSRL
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

TrEMBL top hitse value%identityAlignment
A0A067E748 Uncharacterized protein1.5e-2865.98Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

A0A2H5QBL5 Uncharacterized protein1.5e-2865.98Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

A0A5J5BWK6 Uncharacterized protein1.3e-2762.89Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MGIR+   I TKK+L+W  L   +A ST+ +VP G+F VYV ES +KR+V+P+SYL QPSFQDLL +AEEE+GF HPMG LTIPC ED FI++TSRL
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

A0A6J1CWH9 auxin-responsive protein SAUR21-like2.9e-48100Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH
        MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH

V4SIC7 Uncharacterized protein1.5e-2865.98Show/hide
Query:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        MGIRL   IL K++L+   L+ ++  STSL+VPKGF AVYV E+ RKR++VP+SYL QP FQDLL RAEEEFGF HPMG LTIPC E+TFI++TSRL
Subjt:  MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR238.2e-2461.29Show/hide
Query:  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        ++S ++ KK+L       R A + S   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL
Subjt:  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

Q9FJF9 Auxin-responsive protein SAUR213.7e-2472.22Show/hide
Query:  STSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR
        ST+   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL+
Subjt:  STSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR

Q9FJG0 Auxin-responsive protein SAUR205.3e-2357.45Show/hide
Query:  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR
        ++S +  KK+L         + + +   PKGF AVYV ES +KRY+VPISYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSR +
Subjt:  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR

Q9FJG1 Auxin-responsive protein SAUR191.1e-2367.5Show/hide
Query:  ILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR
        ILS   A  ++   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL+
Subjt:  ILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR

Q9FK62 Auxin-responsive protein SAUR241.8e-2375.76Show/hide
Query:  PKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR
        PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL+
Subjt:  PKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family9.0e-2656.7Show/hide
Query:  MGIRLQSAI-LTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSR
        M IR+   +  +K++L+   L    + S+SL+VPKG+ AVYV E   KR+VVP+SYL QPSFQDLL++AEEEFGF HPMG LTIPC+E+ FI++ SR
Subjt:  MGIRLQSAI-LTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSR

AT5G18010.1 SAUR-like auxin-responsive protein family7.6e-2567.5Show/hide
Query:  ILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR
        ILS   A  ++   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL+
Subjt:  ILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR

AT5G18030.1 SAUR-like auxin-responsive protein family2.6e-2572.22Show/hide
Query:  STSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR
        ST+   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL+
Subjt:  STSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR

AT5G18060.1 SAUR-like auxin-responsive protein family5.8e-2561.29Show/hide
Query:  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL
        ++S ++ KK+L       R A + S   PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL
Subjt:  LQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2475.76Show/hide
Query:  PKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR
        PKGF AVYV ES +KRY+VP+SYL QPSFQ LL ++EEEFGF HPMG LTIPC EDTFI VTSRL+
Subjt:  PKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTACAGAGCGCCATTCTCACAAAGAAAGTTCTTAAATGGTGCATTTTGAGTGAAAGAGAGGCAATTTCAACATCATTGGAGGTTCCAAAAGGCTTCTT
TGCAGTTTATGTAGAAGAGAGCCTCAGAAAACGCTATGTGGTTCCAATATCATACTTAAAACAGCCCTCATTCCAGGATTTGCTAAAAAGAGCTGAAGAAGAATTTGGTT
TTGGTCACCCAATGGGCAGCCTAACTATTCCCTGCACAGAAGATACTTTCATTGAAGTCACTTCTAGGCTTCGGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTACAGAGCGCCATTCTCACAAAGAAAGTTCTTAAATGGTGCATTTTGAGTGAAAGAGAGGCAATTTCAACATCATTGGAGGTTCCAAAAGGCTTCTT
TGCAGTTTATGTAGAAGAGAGCCTCAGAAAACGCTATGTGGTTCCAATATCATACTTAAAACAGCCCTCATTCCAGGATTTGCTAAAAAGAGCTGAAGAAGAATTTGGTT
TTGGTCACCCAATGGGCAGCCTAACTATTCCCTGCACAGAAGATACTTTCATTGAAGTCACTTCTAGGCTTCGGCATTAG
Protein sequenceShow/hide protein sequence
MGIRLQSAILTKKVLKWCILSEREAISTSLEVPKGFFAVYVEESLRKRYVVPISYLKQPSFQDLLKRAEEEFGFGHPMGSLTIPCTEDTFIEVTSRLRH