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MS027932 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027932
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationscaffold375:1476480..1476773
RNA-Seq ExpressionMS027932
SyntenyMS027932
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605034.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3473.96Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRL K+VNA+QNL LSSLT  HGSS IRKG  A+YVG+SQ+ RF+IP+AYL+ P+FKDLL+Q EEEFGYDHPMGGLTIPC+D TFI  +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

XP_008457943.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]7.5e-3576.04Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRL ++VNAVQN+ LSSLT  HGSS IRKG  A+YVGESQ+ RFVIPIAYL+ P+FKDLLSQ  EEFGY+HPMGGLTIPC+DDTF+D +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

XP_022146117.1 auxin-responsive protein SAUR21-like [Momordica charantia]2.9e-4797.94Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL
        MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGES+RNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFID VSRLNEL
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL

XP_022146118.1 auxin-responsive protein SAUR24-like [Momordica charantia]7.5e-3575Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRL +IVNAVQ+L LSSLT  HGSS +R+G  A+YVGESQ+ RFVIP+AYL+ P F+DLLSQAEEE+GY+HPMGGLTIPC+DDTFID +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

XP_038902470.1 auxin-induced protein 15A-like [Benincasa hispida]3.0e-3677.08Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRLA++VNAVQN+ LSSLT  HGSS IRKG  A+YVGESQ+ RFVIP+AYL+ P+FKDLLSQ EEEFGY+HPMGGLTIPC+DDTF+D +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

TrEMBL top hitse value%identityAlignment
A0A0A0LIY4 SAUR family protein1.2e-3371.88Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRL ++VN +QN+ LSSLT  HGSS IRKG  A+YVGE+Q+ RFVIPIAYL+ P+FKDLLSQ  EEFGY+HPMGGLTIPC++DTF+D +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

A0A1S3C683 auxin-responsive protein SAUR21-like3.6e-3576.04Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRL ++VNAVQN+ LSSLT  HGSS IRKG  A+YVGESQ+ RFVIPIAYL+ P+FKDLLSQ  EEFGY+HPMGGLTIPC+DDTF+D +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

A0A5D3BN78 Auxin-responsive protein SAUR21-like3.6e-3576.04Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRL ++VNAVQN+ LSSLT  HGSS IRKG  A+YVGESQ+ RFVIPIAYL+ P+FKDLLSQ  EEFGY+HPMGGLTIPC+DDTF+D +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

A0A6J1CXQ4 auxin-responsive protein SAUR24-like3.6e-3575Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE
        MGFRL +IVNAVQ+L LSSLT  HGSS +R+G  A+YVGESQ+ RFVIP+AYL+ P F+DLLSQAEEE+GY+HPMGGLTIPC+DDTFID +SRLNE
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNE

A0A6J1CYP6 auxin-responsive protein SAUR21-like1.4e-4797.94Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL
        MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGES+RNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFID VSRLNEL
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A52.2e-2151.55Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL
        MGFR+A IV         + +K+     + KG  A+YVG+  R RF IP++YL+ P F++LLSQAEEEFGYDHPMGGLTIPC ++ F++  + LNEL
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL

P33080 Auxin-induced protein X10A8.3e-2149.48Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL
        MGFRL      ++   +++      S  + KG   +YVG+  R RF+IP++YL++P F+DLL+QAEEEFGYDHPMGGLTIPC +D F+   S LN+L
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL

Q9FJF7 Auxin-responsive protein SAUR224.1e-2060.29Show/hide
Query:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL
        S   KG  A+YVGESQ+ R+++P++YL++P F+ LLS++E+EFG+DHPMGGLTIPC++DTFI+  SRL
Subjt:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL

Q9FJF9 Auxin-responsive protein SAUR216.4e-2155Show/hide
Query:  LGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL
        LG   +  +  +S   KG  A+YVGESQ+ R+++P++YL +P F+ LLS++EEEFG+DHPMGGLTIPC +DTFI+  SRL
Subjt:  LGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL

Q9FK62 Auxin-responsive protein SAUR243.2e-2061.76Show/hide
Query:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL
        S   KG  A+YVGESQ+ R+++P++YL++P F+ LLS++EEEFG+DHPMGGLTIPC +DTFI+  SRL
Subjt:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.5e-2250Show/hide
Query:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGE-SQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLN
        M  R+++++ + + L L SL+    +  I KG+ A+YVGE  Q+ RFV+P+ YL  P F+ LL +AEEEFG+DHPMGGLTIPC +  FID  SRL+
Subjt:  MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGE-SQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLN

AT4G38840.1 SAUR-like auxin-responsive protein family4.5e-2246.46Show/hide
Query:  MGFRLAKIVNA----VQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLN
        M  R+ +++ +    ++   L S +    S  + KG  A+YVGE    RFV+P++YL +P F+DLL +AEEEFG+DHPMGGLTIPC+++ FID  SR N
Subjt:  MGFRLAKIVNA----VQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLN

AT5G18030.1 SAUR-like auxin-responsive protein family4.5e-2255Show/hide
Query:  LGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL
        LG   +  +  +S   KG  A+YVGESQ+ R+++P++YL +P F+ LLS++EEEFG+DHPMGGLTIPC +DTFI+  SRL
Subjt:  LGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL

AT5G18050.1 SAUR-like auxin-responsive protein family2.9e-2160.29Show/hide
Query:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL
        S   KG  A+YVGESQ+ R+++P++YL++P F+ LLS++E+EFG+DHPMGGLTIPC++DTFI+  SRL
Subjt:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL

AT5G18080.1 SAUR-like auxin-responsive protein family2.2e-2161.76Show/hide
Query:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL
        S   KG  A+YVGESQ+ R+++P++YL++P F+ LLS++EEEFG+DHPMGGLTIPC +DTFI+  SRL
Subjt:  STIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTCGTTTGGCGAAAATTGTAAATGCGGTACAAAATCTTGGACTTTCTTCTCTAACAAAAAAGCATGGATCTTCAACAATCCGTAAAGGTAATTATGCAATTTA
TGTTGGAGAGAGCCAAAGGAATCGGTTTGTGATTCCAATAGCTTACTTGCATCGGCCATATTTCAAGGACTTGCTCAGTCAAGCTGAAGAAGAATTTGGATACGATCACC
CTATGGGAGGCCTCACCATTCCATGCAATGATGATACATTCATTGATTTCGTCTCTCGTTTGAATGAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTCGTTTGGCGAAAATTGTAAATGCGGTACAAAATCTTGGACTTTCTTCTCTAACAAAAAAGCATGGATCTTCAACAATCCGTAAAGGTAATTATGCAATTTA
TGTTGGAGAGAGCCAAAGGAATCGGTTTGTGATTCCAATAGCTTACTTGCATCGGCCATATTTCAAGGACTTGCTCAGTCAAGCTGAAGAAGAATTTGGATACGATCACC
CTATGGGAGGCCTCACCATTCCATGCAATGATGATACATTCATTGATTTCGTCTCTCGTTTGAATGAGTTGTGA
Protein sequenceShow/hide protein sequence
MGFRLAKIVNAVQNLGLSSLTKKHGSSTIRKGNYAIYVGESQRNRFVIPIAYLHRPYFKDLLSQAEEEFGYDHPMGGLTIPCNDDTFIDFVSRLNEL