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MS027933 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027933
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR23-like
Genome locationscaffold375:1478539..1478832
RNA-Seq ExpressionMS027933
SyntenyMS027933
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147006.1 auxin-responsive protein SAUR23 [Cucumis sativus]7.0e-4185.57Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILL TK+ILK+QG S++ KSDIPKGHIAVYVGEIQTKRFVVP+++LNHPSF+NLLKRAEEEFGFN PMGGLTIPCRE+ FIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

XP_008457625.1 PREDICTED: auxin-responsive protein SAUR23-like [Cucumis melo]1.0e-3982.47Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILL TK+ILK+QG S++ KSD+P+GHIAVYVGEIQTKRFVVP+++LNHPSF+NLLK AEEEFGFN PMGGLTIPCRE+ FIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

XP_022146172.1 auxin-responsive protein SAUR23-like [Momordica charantia]3.8e-47100Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

XP_022146173.1 auxin-responsive protein SAUR23-like [Momordica charantia]3.1e-4186.6Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILL+ K+ILK+Q ASS+NK DIPKGHIAVYVGEIQTKRFVVP++YLNHPSF+NLLKRAEEEFGFN PMGGLTIPCRE+ FIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

XP_038901144.1 auxin-responsive protein SAUR23-like [Benincasa hispida]2.0e-4087.37Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH
        MGIRLPSILL TK+ILK+QGASS+ KSDIPKGHIAVYVGEIQTKRFVVP+++LNHPSF+NLLKRAEEEFGFN PMGGLTIPCRE+ FIDLTSRLH
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH

TrEMBL top hitse value%identityAlignment
A0A0A0LPG7 Uncharacterized protein3.4e-4185.57Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILL TK+ILK+QG S++ KSDIPKGHIAVYVGEIQTKRFVVP+++LNHPSF+NLLKRAEEEFGFN PMGGLTIPCRE+ FIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

A0A1S3C778 auxin-responsive protein SAUR23-like4.9e-4082.47Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILL TK+ILK+QG S++ KSD+P+GHIAVYVGEIQTKRFVVP+++LNHPSF+NLLK AEEEFGFN PMGGLTIPCRE+ FIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

A0A6J1CXW2 auxin-responsive protein SAUR23-like1.5e-4186.6Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILL+ K+ILK+Q ASS+NK DIPKGHIAVYVGEIQTKRFVVP++YLNHPSF+NLLKRAEEEFGFN PMGGLTIPCRE+ FIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

A0A6J1CYV1 auxin-responsive protein SAUR23-like1.8e-47100Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

A0A6J1JH54 auxin-responsive protein SAUR21-like2.4e-3986.17Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL
        MGIRLPSILL TK+ILK+QGASS+ KS+IPKGHIAVYVGEIQT+RFVVP++YLNHPSF+NLLKRAEEEFGFN PMGGLTIPCRE+ FIDLTSRL
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.2e-2260.92Show/hide
Query:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH
        LL  K+IL    A+    S  PKG +AVYVGE Q KR++VP++YLN PSF  LL ++EEEFGF+ PMGGLTIPC ED FI++TSRLH
Subjt:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH

Q9FJF7 Auxin-responsive protein SAUR227.5e-2259.3Show/hide
Query:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL
        LL  K+IL     S+   S  PKG +AVYVGE Q KR++VP++YLN PSF  LL ++E+EFGF+ PMGGLTIPC ED FI++TSRL
Subjt:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL

Q9FJF9 Auxin-responsive protein SAUR211.7e-2159.3Show/hide
Query:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL
        LL  K+IL    AS+      PKG +AVYVGE Q KR++VP++YL+ PSF  LL ++EEEFGF+ PMGGLTIPC ED FI++TSRL
Subjt:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL

Q9FJG0 Auxin-responsive protein SAUR207.5e-2260Show/hide
Query:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSR
        LL  K+IL     S+   S  PKG +AVYVGE Q KR++VP++YLN PSF  LL ++EEEFGF+ PMGGLTIPC ED FI++TSR
Subjt:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSR

Q9FK62 Auxin-responsive protein SAUR243.4e-2261.63Show/hide
Query:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL
        LL  K+IL     S+   S  PKG +AVYVGE Q KR++VPV+YLN PSF  LL ++EEEFGF+ PMGGLTIPC ED FI++TSRL
Subjt:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.7e-2964.29Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGE-IQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS
        M IR+  +L S+K++LK    SS N + IPKGH+AVYVGE +Q +RFVVPVTYL+HP F  LL++AEEEFGF+ PMGGLTIPC E +FIDL SRL TS
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGE-IQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS

AT4G34800.1 SAUR-like auxin-responsive protein family8.2e-2457.61Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGE--IQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDL
        M IRL  ++ S +        S + +S +PKGH+AVYVGE     KRFVVP++YLNHPSF  LL RAEEEFGFN P+GGLTIPCRE+ F+ L
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGE--IQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDL

AT4G34810.1 SAUR-like auxin-responsive protein family2.1e-2757.69Show/hide
Query:  MGIRLPSILLSTKRILKVQGASSRNKSD------IPKGHIAVYVG---EIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDL-
        MG+   +I  +TK+ILK+   ++RN++       +PKGH+AVYVG   E++ KRFVVP+++LNHPSF   L RAEEEFGFN PMGGLTIPCRE+VF+DL 
Subjt:  MGIRLPSILLSTKRILKVQGASSRNKSD------IPKGHIAVYVG---EIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDL-

Query:  TSRL
         SRL
Subjt:  TSRL

AT4G38840.1 SAUR-like auxin-responsive protein family6.5e-2958.59Show/hide
Query:  MGIRLPSILLSTKRILK----VQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH
        M IR+P +L S+K+IL+    +  +SS +  D+PKG++AVYVGE   KRFVVPV+YL+ PSF +LL++AEEEFGF+ PMGGLTIPC E++FIDL SR +
Subjt:  MGIRLPSILLSTKRILK----VQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH

AT5G18060.1 SAUR-like auxin-responsive protein family8.2e-2460.92Show/hide
Query:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH
        LL  K+IL    A+    S  PKG +AVYVGE Q KR++VP++YLN PSF  LL ++EEEFGF+ PMGGLTIPC ED FI++TSRLH
Subjt:  LLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTGCCTTCAATTCTTCTTAGCACCAAACGAATTCTCAAAGTGCAGGGTGCTTCTTCCCGAAATAAGTCTGACATTCCCAAAGGTCACATTGCAGTCTA
TGTGGGAGAAATCCAAACAAAGAGATTTGTGGTTCCAGTTACTTACTTGAACCATCCTTCATTTGTAAACTTGCTAAAGAGGGCTGAGGAAGAGTTTGGATTCAACCAAC
CAATGGGTGGTCTGACAATTCCCTGCAGAGAAGATGTCTTCATTGATCTCACTTCTAGGTTGCATACATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTGCCTTCAATTCTTCTTAGCACCAAACGAATTCTCAAAGTGCAGGGTGCTTCTTCCCGAAATAAGTCTGACATTCCCAAAGGTCACATTGCAGTCTA
TGTGGGAGAAATCCAAACAAAGAGATTTGTGGTTCCAGTTACTTACTTGAACCATCCTTCATTTGTAAACTTGCTAAAGAGGGCTGAGGAAGAGTTTGGATTCAACCAAC
CAATGGGTGGTCTGACAATTCCCTGCAGAGAAGATGTCTTCATTGATCTCACTTCTAGGTTGCATACATCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSILLSTKRILKVQGASSRNKSDIPKGHIAVYVGEIQTKRFVVPVTYLNHPSFVNLLKRAEEEFGFNQPMGGLTIPCREDVFIDLTSRLHTS