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MS027934 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027934
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR23-like
Genome locationscaffold375:1500857..1501150
RNA-Seq ExpressionMS027934
SyntenyMS027934
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651887.1 hypothetical protein Csa_006423 [Cucumis sativus]1.3e-3981.25Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MG RL S+LFSAKQIL+ QS+S RC+S+VPKGH AVY+GEIQ+KRFLVP+SYLNHP F+DLL RAEEEFGFNHPTGGLTIPCKEEAF+DVT RLHT
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

XP_004147010.1 auxin-responsive protein SAUR23 [Cucumis sativus]1.3e-3981.25Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MG RL S+LFSAKQIL+ QS+S RC+S+VPKGH AVY+GEIQ+KRFLVP+SYLNHP F+DLL RAEEEFGFNHPTGGLTIPCKEEAF+DVT RLHT
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

XP_008457631.1 PREDICTED: auxin-responsive protein SAUR23-like [Cucumis melo]8.5e-3979.17Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MG RL S+LFSAKQIL+ QS+S RC+S+VPKGH AVY+GE+Q+ RFLVP+SYLNHP F+DLL RAEEEFGFNHPTGGLTIPCKEEAF+DVT RLHT
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

XP_022146174.1 auxin-responsive protein SAUR23-like [Momordica charantia]1.3e-4797.94Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHTP
        MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGH AVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTP LHTP
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHTP

XP_022944373.1 auxin-responsive protein SAUR22-like [Cucurbita moschata]8.5e-3983.33Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MGIRL S+LFSAKQIL+TQSVS R +SNVPKGH AVY+GEIQRKRFLVP+SYLNHP FV+LL RAEEEFGFNHPTGGLTIPC EEAF+DVT RL+T
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

TrEMBL top hitse value%identityAlignment
A0A0A0LIZ4 Uncharacterized protein6.4e-4081.25Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MG RL S+LFSAKQIL+ QS+S RC+S+VPKGH AVY+GEIQ+KRFLVP+SYLNHP F+DLL RAEEEFGFNHPTGGLTIPCKEEAF+DVT RLHT
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

A0A1S3C783 auxin-responsive protein SAUR23-like4.1e-3979.17Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MG RL S+LFSAKQIL+ QS+S RC+S+VPKGH AVY+GE+Q+ RFLVP+SYLNHP F+DLL RAEEEFGFNHPTGGLTIPCKEEAF+DVT RLHT
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

A0A5A7TQ48 Auxin-responsive protein SAUR23-like4.1e-3979.17Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MG RL S+LFSAKQIL+ QS+S RC+S+VPKGH AVY+GE+Q+ RFLVP+SYLNHP F+DLL RAEEEFGFNHPTGGLTIPCKEEAF+DVT RLHT
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

A0A6J1CXD1 auxin-responsive protein SAUR23-like6.3e-4897.94Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHTP
        MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGH AVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTP LHTP
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHTP

A0A6J1FXZ9 auxin-responsive protein SAUR22-like4.1e-3983.33Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        MGIRL S+LFSAKQIL+TQSVS R +SNVPKGH AVY+GEIQRKRFLVP+SYLNHP FV+LL RAEEEFGFNHPTGGLTIPC EEAF+DVT RL+T
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR236.8e-2360.92Show/hide
Query:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLH
        L  AK+IL   S SA   S  PKG  AVY+GE Q+KR+LVP+SYLN P F  LL ++EEEFGF+HP GGLTIPC E+ F++VT RLH
Subjt:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLH

Q9FJF7 Auxin-responsive protein SAUR221.3e-2158.14Show/hide
Query:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRL
        L  AK+IL   S S    S  PKG  AVY+GE Q+KR+LVP+SYLN P F  LL ++E+EFGF+HP GGLTIPC E+ F++VT RL
Subjt:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRL

Q9FJF9 Auxin-responsive protein SAUR211.3e-2156.98Show/hide
Query:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRL
        L  AK+IL   + SA      PKG  AVY+GE Q+KR+LVP+SYL+ P F  LL ++EEEFGF+HP GGLTIPC E+ F++VT RL
Subjt:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRL

Q9FJG0 Auxin-responsive protein SAUR204.4e-2257.65Show/hide
Query:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPR
        L  AK+IL   + +A   S  PKG  AVY+GE Q+KR+LVP+SYLN P F  LL ++EEEFGF+HP GGLTIPC E+ F++VT R
Subjt:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPR

Q9FK62 Auxin-responsive protein SAUR242.6e-2260.47Show/hide
Query:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRL
        L  AK+IL   S S    S  PKG  AVY+GE Q+KR+LVPVSYLN P F  LL ++EEEFGF+HP GGLTIPC E+ F++VT RL
Subjt:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.0e-2656.7Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGE-IQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT
        M IR+  VL S+KQ+L++ S S+     +PKGH AVY+GE +Q++RF+VPV+YL+HP F  LL +AEEEFGF+HP GGLTIPC E+ F+D+  RL T
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGE-IQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHT

AT4G34800.1 SAUR-like auxin-responsive protein family1.4e-2361.11Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGE--IQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFV
        M IRL  V+ ++KQ       S + +S VPKGH AVY+GE    +KRF+VP+SYLNHP F  LL RAEEEFGFNHP GGLTIPC+EE FV
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGE--IQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFV

AT4G34810.1 SAUR-like auxin-responsive protein family1.1e-2553.54Show/hide
Query:  MGIRLHSVLFSAKQILRTQSVSARCRS------NVPKGHAAVYIG---EIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDV
        MG+   ++  + KQIL+  S++ R R+      +VPKGH AVY+G   E+++KRF+VP+S+LNHP F + L RAEEEFGFNHP GGLTIPC+EE F+D+
Subjt:  MGIRLHSVLFSAKQILRTQSVSARCRS------NVPKGHAAVYIG---EIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDV

AT4G38840.1 SAUR-like auxin-responsive protein family6.7e-2657.58Show/hide
Query:  MGIRLHSVLFSAKQILR----TQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLH
        M IR+  VL S+KQILR      S S+    +VPKG+ AVY+GE   KRF+VPVSYL+ P F DLL +AEEEFGF+HP GGLTIPC EE F+D+  R +
Subjt:  MGIRLHSVLFSAKQILR----TQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLH

AT5G18060.1 SAUR-like auxin-responsive protein family4.8e-2460.92Show/hide
Query:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLH
        L  AK+IL   S SA   S  PKG  AVY+GE Q+KR+LVP+SYLN P F  LL ++EEEFGF+HP GGLTIPC E+ F++VT RLH
Subjt:  LFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGTCTACATTCTGTTCTCTTTAGTGCCAAGCAAATCCTCAGAACACAATCTGTTTCTGCGAGATGTCGGTCCAATGTTCCCAAAGGTCATGCTGCAGTGTA
CATTGGAGAAATTCAGAGGAAGCGGTTCTTGGTTCCAGTTTCTTACTTGAACCATCCTTTATTTGTAGACTTGCTCGGTAGGGCTGAAGAAGAGTTTGGATTCAACCATC
CTACAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCGTTGATGTCACTCCTAGACTGCATACTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCGTCTACATTCTGTTCTCTTTAGTGCCAAGCAAATCCTCAGAACACAATCTGTTTCTGCGAGATGTCGGTCCAATGTTCCCAAAGGTCATGCTGCAGTGTA
CATTGGAGAAATTCAGAGGAAGCGGTTCTTGGTTCCAGTTTCTTACTTGAACCATCCTTTATTTGTAGACTTGCTCGGTAGGGCTGAAGAAGAGTTTGGATTCAACCATC
CTACAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCGTTGATGTCACTCCTAGACTGCATACTCCATAG
Protein sequenceShow/hide protein sequence
MGIRLHSVLFSAKQILRTQSVSARCRSNVPKGHAAVYIGEIQRKRFLVPVSYLNHPLFVDLLGRAEEEFGFNHPTGGLTIPCKEEAFVDVTPRLHTP