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MS027935 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027935
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR23-like
Genome locationscaffold375:1502741..1503034
RNA-Seq ExpressionMS027935
SyntenyMS027935
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61931.2 hypothetical protein Csa_006339 [Cucumis sativus]1.1e-4187.63Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        MGIRLPS LL+AKQILK + VS+RCQS++PKGHI VYVGENQRKRF VPISYLNHPSFVNLLSRAEEEFGF+HP GGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

XP_008457634.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.4e-4187.63Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        MGIRLPS LL+AKQILK + VS+RCQS++PKGHI VYVGENQRKRFLVPISYLNHPSFV+LLSRAEEEFGF+HP GGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

XP_011649272.1 auxin-responsive protein SAUR21 [Cucumis sativus]3.7e-4288.66Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        MGIRLPS LL+AKQILK + VS+RCQS++PKGHI VYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGF+HP GGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

XP_022146116.1 auxin-responsive protein SAUR23-like [Momordica charantia]1.1e-4697.94Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        +GIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFV LLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

XP_022146162.1 auxin-responsive protein SAUR23-like [Momordica charantia]5.1e-4496.81Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
        MGIRLPS LLTAKQILK QFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFV LLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL

TrEMBL top hitse value%identityAlignment
A0A0A0LM65 Uncharacterized protein1.8e-4288.66Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        MGIRLPS LL+AKQILK + VS+RCQS++PKGHI VYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGF+HP GGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

A0A1S3C626 auxin-responsive protein SAUR21-like6.8e-4287.63Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        MGIRLPS LL+AKQILK + VS+RCQS++PKGHI VYVGENQRKRFLVPISYLNHPSFV+LLSRAEEEFGF+HP GGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

A0A5A7TWB4 Auxin-responsive protein SAUR21-like6.8e-4287.63Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        MGIRLPS LL+AKQILK + VS+RCQS++PKGHI VYVGENQRKRFLVPISYLNHPSFV+LLSRAEEEFGF+HP GGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

A0A6J1CYD2 auxin-responsive protein SAUR23-like5.4e-4797.94Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        +GIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFV LLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

A0A6J1CYU1 auxin-responsive protein SAUR23-like2.5e-4496.81Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
        MGIRLPS LLTAKQILK QFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFV LLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR236.6e-2663.74Show/hide
Query:  LPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLH
        L  +LL AK+IL     S+   S  PKG +AVYVGE+Q+KR+LVP+SYLN PSF  LLS++EEEFGF+HP GGLTIPC E+ FI+VTSRLH
Subjt:  LPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLH

Q9FJF7 Auxin-responsive protein SAUR221.6e-2462.22Show/hide
Query:  LPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
        L  +LL AK+IL     S+   S  PKG +AVYVGE+Q+KR+LVP+SYLN PSF  LLS++E+EFGF+HP GGLTIPC E+ FI+VTSRL
Subjt:  LPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL

Q9FJG0 Auxin-responsive protein SAUR201.2e-2465.12Show/hide
Query:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSR
        +LL AK+IL     S+   S  PKG +AVYVGE+Q+KR+LVPISYLN PSF  LLS++EEEFGF+HP GGLTIPC E+ FI+VTSR
Subjt:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSR

Q9FJG1 Auxin-responsive protein SAUR196.2e-2463.22Show/hide
Query:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
        +LL AK+IL     S+   S  PKG +AVYVGE+Q+KR+LVP+SYL+ PSF  LLS++EEEFGF HP GGLTIPC E+ FI+VTSRL
Subjt:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL

Q9FK62 Auxin-responsive protein SAUR247.3e-2564.37Show/hide
Query:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
        +LL AK+IL     S+   S  PKG +AVYVGE+Q+KR+LVP+SYLN PSF  LLS++EEEFGF+HP GGLTIPC E+ FI+VTSRL
Subjt:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.0e-2658.16Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGE-NQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS
        M IR+   L ++KQ+LK+   SS     IPKGH+AVYVGE  Q++RF+VP++YL+HP F  LL +AEEEFGF+HP GGLTIPC E+ FID+ SRL  S
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGE-NQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS

AT4G34800.1 SAUR-like auxin-responsive protein family5.2e-2664.44Show/hide
Query:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGE--NQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFI
        M IRL S ++ +KQ       S + QS +PKGH+AVYVGE    +KRF+VPISYLNHPSF  LLSRAEEEFGFNHP GGLTIPC+EE F+
Subjt:  MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGE--NQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFI

AT4G38840.1 SAUR-like auxin-responsive protein family2.7e-2757.58Show/hide
Query:  MGIRLPSALLTAKQILK-TQFVSSRCQS---NIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLH
        M IR+P  L ++KQIL+  + +SS   S   ++PKG++AVYVGE   KRF+VP+SYL+ PSF +LL +AEEEFGF+HP GGLTIPC EE FID+ SR +
Subjt:  MGIRLPSALLTAKQILK-TQFVSSRCQS---NIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLH

AT5G18060.1 SAUR-like auxin-responsive protein family4.7e-2763.74Show/hide
Query:  LPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLH
        L  +LL AK+IL     S+   S  PKG +AVYVGE+Q+KR+LVP+SYLN PSF  LLS++EEEFGF+HP GGLTIPC E+ FI+VTSRLH
Subjt:  LPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLH

AT5G18080.1 SAUR-like auxin-responsive protein family5.2e-2664.37Show/hide
Query:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL
        +LL AK+IL     S+   S  PKG +AVYVGE+Q+KR+LVP+SYLN PSF  LLS++EEEFGF+HP GGLTIPC E+ FI+VTSRL
Subjt:  ALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGTCTGCCTTCCGCTCTCCTCACTGCCAAGCAAATTCTAAAGACGCAGTTCGTTTCATCAAGATGTCAGTCCAATATTCCCAAAGGCCATATTGCGGTGTA
CGTGGGGGAAAACCAGAGAAAGCGGTTTTTGGTTCCGATTTCCTACTTGAATCACCCTTCATTTGTAAACTTGCTCAGTAGAGCTGAAGAAGAGTTTGGATTCAACCATC
CAGCAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTGCATATCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCGTCTGCCTTCCGCTCTCCTCACTGCCAAGCAAATTCTAAAGACGCAGTTCGTTTCATCAAGATGTCAGTCCAATATTCCCAAAGGCCATATTGCGGTGTA
CGTGGGGGAAAACCAGAGAAAGCGGTTTTTGGTTCCGATTTCCTACTTGAATCACCCTTCATTTGTAAACTTGCTCAGTAGAGCTGAAGAAGAGTTTGGATTCAACCATC
CAGCAGGAGGTTTGACCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGACTGCATATCTCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSALLTAKQILKTQFVSSRCQSNIPKGHIAVYVGENQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPAGGLTIPCKEEAFIDVTSRLHIS