; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027936 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027936
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationscaffold375:1504746..1505039
RNA-Seq ExpressionMS027936
SyntenyMS027936
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146168.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.4e-4696.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIRLLSLVPHAKQ+LK+QSGFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]4.2e-4696.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]9.4e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.2e-4595.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]9.4e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL+HAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CXV3 auxin-responsive protein SAUR24-like7.0e-4796.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIRLLSLVPHAKQ+LK+QSGFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

A0A6J1FU83 auxin-responsive protein SAUR24-like4.5e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like2.0e-4696.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

A0A6J1G6T7 auxin-responsive protein SAUR24-like5.9e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like2.0e-4696.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        MGIR LSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.5e-2272.73Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.6e-2272.73Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.8e-2365.82Show/hide
Query:  KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSR Q
Subjt:  KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR193.4e-2272.73Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.4e-2364.29Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.8e-2658.16Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS
        M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LL  AEEEFGF HP GGLTIPC E  FI L SRL  S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS

AT4G34790.1 SAUR-like auxin-responsive protein family2.6e-2554.63Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI
        MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI

Query:  VLTSRLQV
         L +  Q+
Subjt:  VLTSRLQV

AT4G34810.1 SAUR-like auxin-responsive protein family1.8e-2656.19Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI-VL
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+ ++
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI-VL

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family4.0e-2658.76Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSR
        M IR+  ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FI L SR
Subjt:  MGIRLLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family9.7e-2564.29Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACGAAAAACCAGTTGGATGTTCCAAAAGGTCATGTGGCAGTTTA
CGTGGGAGAGATTCAAAGGAAGCGGTTTGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAGCAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATC
CACAGGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTATTGTTCTCACTTCTAGATTGCAAGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTAGATTGCTATCTTTGGTTCCTCATGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACGAAAAACCAGTTGGATGTTCCAAAAGGTCATGTGGCAGTTTA
CGTGGGAGAGATTCAAAGGAAGCGGTTTGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAGCAACTGCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATC
CACAGGGAGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTATTGTTCTCACTTCTAGATTGCAAGTTTCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS