; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027938 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027938
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationscaffold375:1508079..1508372
RNA-Seq ExpressionMS027938
SyntenyMS027938
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146168.1 auxin-responsive protein SAUR24-like [Momordica charantia]7.2e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQ+LK+QSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.6e-4595.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

XP_022947576.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]3.6e-4594.85Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAF+ LTSRL V+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]2.1e-4595.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]2.1e-4594.85Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAF+ LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

TrEMBL top hitse value%identityAlignment
A0A6J1CXV3 auxin-responsive protein SAUR24-like3.5e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQ+LK+QSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

A0A6J1G6T7 auxin-responsive protein SAUR24-like7.8e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

A0A6J1G6U1 auxin-responsive protein SAUR23-like1.7e-4594.85Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAF+ LTSRL V+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

A0A6J1JHE3 auxin-responsive protein SAUR24-like2.3e-4594.85Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIR LSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFI LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

A0A6J1KZJ6 auxin-responsive protein SAUR24-like1.0e-4595.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCKEDAFI LTSRLQV+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.5e-2262.65Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRL
        AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRL
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRL

Q9FJF7 Auxin-responsive protein SAUR224.0e-2364.56Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ
        K+ S  T +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.3e-2365.82Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ
        K+ S  T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSR Q
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR198.9e-2364.56Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ
        K+ S  T +    PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ

Q9FK62 Auxin-responsive protein SAUR246.2e-2464.29Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ
        AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.0e-2556.12Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA
        M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LL  AEEEFGF HP GGLTIPC E  FI L SRL  +
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA

AT4G34790.1 SAUR-like auxin-responsive protein family1.5e-2554.63Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI
        MG+ + S++P+AKQI K QS   K+              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI

Query:  YLTSRLQV
        YL +  Q+
Subjt:  YLTSRLQV

AT4G34810.1 SAUR-like auxin-responsive protein family1.5e-2555.24Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI-YL
        MG+   ++    KQILK+ S   +++        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+  +
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI-YL

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family2.3e-2659.79Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSR
        M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FI L SR
Subjt:  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family4.4e-2564.29Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ
        AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI +TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATCCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCAGTATA
TGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAGCTGCTCAGCCATGCAGAAGAAGAATTTGGCTTCCATCATC
CACAGGGGGGTCTGACAATTCCTTGCAAAGAGGATGCCTTCATTTATCTCACTTCTAGATTGCAAGTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATCCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTTTCACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCAGTATA
TGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAGCTGCTCAGCCATGCAGAAGAAGAATTTGGCTTCCATCATC
CACAGGGGGGTCTGACAATTCCTTGCAAAGAGGATGCCTTCATTTATCTCACTTCTAGATTGCAAGTAGCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIYLTSRLQVA