; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027939 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027939
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationscaffold375:1512159..1512452
RNA-Seq ExpressionMS027939
SyntenyMS027939
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4492.78Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLLL+AKQ+VKM TVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK++EEEFGFKHPTGGLTIPCREDVFINLTS+LQTS
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]1.4e-4492.78Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLLL+AKQV KMHTVSSRNQCGVPKGHIAVYVGD+ERKRFVVP+SYLNHPSFSALLKS+EEEFGFKHPTGGLTIPCREDVFINLTS+LQ S
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]3.9e-4491.75Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLL +AKQV KMHTVSSRNQCGVPKGHIAVYVGD+ERKRFVVP+SYLNHPSFSALLKS+EEEFGFKHPTGGLTIPCREDVFINLTS+LQ S
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.8e-4492.78Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLLL+AKQ+VKM TVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK++EEEFGFKHPTGGLTIPCREDVFINLTS+LQTS
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]3.0e-4492.78Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLLL+AKQVVKM TV SRNQCGVPKGHIAVYVGD+ERKRFVVPISYLNHPSFSALLK++EEEFGFKHPTGGLTIPCREDVFINLTS+LQTS
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein6.6e-4592.78Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLLL+AKQV KMHTVSSRNQCGVPKGHIAVYVGD+ERKRFVVP+SYLNHPSFSALLKS+EEEFGFKHPTGGLTIPCREDVFINLTS+LQ S
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

A0A1S3C787 auxin-responsive protein SAUR21-like1.9e-4491.75Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLL +AKQV KMHTVSSRNQCGVPKGHIAVYVGD+ERKRFVVP+SYLNHPSFSALLKS+EEEFGFKHPTGGLTIPCREDVFINLTS+LQ S
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like1.9e-4491.75Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLL +AKQV KMHTVSSRNQCGVPKGHIAVYVGD+ERKRFVVP+SYLNHPSFSALLKS+EEEFGFKHPTGGLTIPCREDVFINLTS+LQ S
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

A0A6J1FVH4 auxin-responsive protein SAUR21-like8.6e-4592.78Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLLL+AKQ+VKM TVSSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK++EEEFGFKHPTGGLTIPCREDVFINLTS+LQTS
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

A0A6J1JGW3 auxin-responsive protein SAUR21-like1.5e-4492.78Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        MGIRLPSLLL+AKQVVKM TV SRNQCGVPKGHIAVYVGD+ERKRFVVPISYLNHPSFSALLK++EEEFGFKHPTGGLTIPCREDVFINLTS+LQTS
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR224.7e-2458.62Show/hide
Query:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  SE+EFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FJF9 Auxin-responsive protein SAUR214.7e-2459.77Show/hide
Query:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+++   T S+      PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  SEEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FJG0 Auxin-responsive protein SAUR202.8e-2459.77Show/hide
Query:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+++   T ++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  SEEEFGF HP GGLTIPC ED FIN+TS+ Q
Subjt:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FJG1 Auxin-responsive protein SAUR198.0e-2458.62Show/hide
Query:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  SEEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FK62 Auxin-responsive protein SAUR243.6e-2459.77Show/hide
Query:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  SEEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.1e-2757.14Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGD-MERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS
        M IR+  +L S+KQ++K  + SS N   +PKGH+AVYVG+ M+++RFVVP++YL+HP F  LL+ +EEEFGF HP GGLTIPC E +FI+L S+L TS
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGD-MERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS

AT4G34810.1 SAUR-like auxin-responsive protein family1.8e-2654.29Show/hide
Query:  MGIRLPSLLLSAKQVVKMHTVSSRNQCG------VPKGHIAVYVG---DMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINL-
        MG+   ++  + KQ++K++++++RN+        VPKGH+AVYVG   +ME+KRFVVPIS+LNHPSF   L  +EEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLSAKQVVKMHTVSSRNQCG------VPKGHIAVYVG---DMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINL-

Query:  TSKLQ
         S+LQ
Subjt:  TSKLQ

AT4G38840.1 SAUR-like auxin-responsive protein family3.0e-2654.64Show/hide
Query:  MGIRLPSLLLSAKQVVK----MHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSK
        M IR+P +L S+KQ+++    + + SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ +EEEFGF HP GGLTIPC E++FI+L S+
Subjt:  MGIRLPSLLLSAKQVVK----MHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSK

AT5G18020.1 SAUR-like auxin-responsive protein family2.0e-2559.77Show/hide
Query:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+++   T ++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  SEEEFGF HP GGLTIPC ED FIN+TS+ Q
Subjt:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

AT5G18080.1 SAUR-like auxin-responsive protein family2.6e-2559.77Show/hide
Query:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  SEEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAGTGCCAAGCAAGTTGTCAAGATGCATACCGTTTCTTCAAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATGGAAAGAAAACGCTTTGTAGTTCCAATATCATACTTGAACCATCCTTCTTTTTCTGCTTTGCTCAAGAGTTCTGAAGAAGAATTTGGATTCAAACATC
CAACTGGAGGTCTGACAATCCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTACAAACTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACCTTCACTTCTCCTCAGTGCCAAGCAAGTTGTCAAGATGCATACCGTTTCTTCAAGAAACCAATGTGGTGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATGGAAAGAAAACGCTTTGTAGTTCCAATATCATACTTGAACCATCCTTCTTTTTCTGCTTTGCTCAAGAGTTCTGAAGAAGAATTTGGATTCAAACATC
CAACTGGAGGTCTGACAATCCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTACAAACTTCCTGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLSAKQVVKMHTVSSRNQCGVPKGHIAVYVGDMERKRFVVPISYLNHPSFSALLKSSEEEFGFKHPTGGLTIPCREDVFINLTSKLQTS