; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027940 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027940
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR23-like
Genome locationscaffold375:1515262..1515558
RNA-Seq ExpressionMS027940
SyntenyMS027940
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146161.1 auxin-responsive protein SAUR23-like [Momordica charantia]4.1e-4998.98Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE
        MGIRLLSLVPHAK ILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.1e-4594.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIR LSLVPHAKQILKMQSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRL +
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

XP_022944371.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]9.5e-4694.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIR LSLVPHAKQILKMQ GFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLH+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

XP_022947576.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]4.3e-4694.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIRLLSLVPHAKQILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

XP_023533294.1 auxin-responsive protein SAUR23-like [Cucurbita pepo subsp. pepo]1.6e-4592.71Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIRLLSLVPHAKQILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ++LSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

TrEMBL top hitse value%identityAlignment
A0A6J1CYH2 auxin-responsive protein SAUR23-like2.0e-4998.98Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE
        MGIRLLSLVPHAK ILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE

A0A6J1FU85 auxin-responsive protein SAUR23-like4.6e-4694.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIR LSLVPHAKQILKMQ GFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLH+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

A0A6J1FVI4 auxin-responsive protein SAUR24-like1.0e-4594.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIR LSLVPHAKQILKMQSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRL +
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

A0A6J1G6U1 auxin-responsive protein SAUR23-like2.1e-4694.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIRLLSLVPHAKQILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

A0A6J1JHE3 auxin-responsive protein SAUR24-like1.0e-4594.79Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL
        MGIR LSLVPHAKQILKMQSGFTKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRL +
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR238.1e-2474.24Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLH
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH

Q9FJF7 Auxin-responsive protein SAUR221.5e-2272.31Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI++TSRL
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL

Q9FJF9 Auxin-responsive protein SAUR212.6e-2272.31Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRL
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL

Q9FJG0 Auxin-responsive protein SAUR201.5e-2275Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR
        PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSR
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR

Q9FK62 Auxin-responsive protein SAUR241.4e-2363.86Show/hide
Query:  AKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRL
Subjt:  AKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.8e-2760Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL
        M IR+  ++  +KQ+LK  S  + N++ +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LL  AEEEFGF HP GGLTIPC E  FIDL SRL
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL

AT4G34790.1 SAUR-like auxin-responsive protein family7.5e-2556.86Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI
        MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI

Query:  DL
         L
Subjt:  DL

AT4G34810.1 SAUR-like auxin-responsive protein family1.1e-2657.69Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKNHLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +N         VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKNHLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-

Query:  TSRL
         SRL
Subjt:  TSRL

AT4G38840.1 SAUR-like auxin-responsive protein family2.1e-2758.59Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH
        M IR+  ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR +
Subjt:  MGIRLLSLVPHAKQILK----MQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH

AT5G18060.1 SAUR-like auxin-responsive protein family5.8e-2574.24Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLH
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATCCGATTGCTTTCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTTTCACCAAAAATCATTTGGATGTGCCAAAGGGTCATGTGGCAGTTTA
TGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAACTACTCAGCCATGCTGAGGAAGAGTTTGGATTCCATCATC
CACAGGGGGGTCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCATCTTGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATCCGATTGCTTTCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTTTCACCAAAAATCATTTGGATGTGCCAAAGGGTCATGTGGCAGTTTA
TGTGGGAGAGATCCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCATCATTCCAACAACTACTCAGCCATGCTGAGGAAGAGTTTGGATTCCATCATC
CACAGGGGGGTCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCATCTTGAAGAATGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLHLEE