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MS027941 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027941
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationscaffold375:1518607..1519194
RNA-Seq ExpressionMS027941
SyntenyMS027941
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]4.6e-4493.81Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        MGIRLPSLLLNAKQV KMHTVS R QCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPC EDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.4e-4392.78Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        MGIRLPSLL NAKQV KMHTVS R QCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPC EDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

XP_022146176.1 auxin-responsive protein SAUR21-like [Momordica charantia]2.2e-4698.97Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        MGIRLPS LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.0e-4791.51Show/hide
Query:  QAESLSKLDMGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLT
        QA+SLSKLDMGIRLPSLLLNAKQ++KM TVS R QCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPC EDVFINLT
Subjt:  QAESLSKLDMGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLT

Query:  SRLQTS
        SRLQTS
Subjt:  SRLQTS

XP_023512604.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]5.9e-4791.51Show/hide
Query:  QAESLSKLDMGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLT
        QAESLSKLDMGIRLPSLLLNAKQ++KM TVS R QCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHP GGLTIPC EDVFINLT
Subjt:  QAESLSKLDMGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLT

Query:  SRLQTS
        SRLQTS
Subjt:  SRLQTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein2.2e-4493.81Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        MGIRLPSLLLNAKQV KMHTVS R QCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPC EDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

A0A1S3C787 auxin-responsive protein SAUR21-like6.5e-4492.78Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        MGIRLPSLL NAKQV KMHTVS R QCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPC EDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like6.5e-4492.78Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        MGIRLPSLL NAKQV KMHTVS R QCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPC EDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

A0A6J1CYI4 auxin-responsive protein SAUR21-like1.1e-4698.97Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        MGIRLPS LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

A0A6J1FVH4 auxin-responsive protein SAUR21-like9.8e-4891.51Show/hide
Query:  QAESLSKLDMGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLT
        QA+SLSKLDMGIRLPSLLLNAKQ++KM TVS R QCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPC EDVFINLT
Subjt:  QAESLSKLDMGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLT

Query:  SRLQTS
        SRLQTS
Subjt:  SRLQTS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR225.5e-2459.77Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR214.2e-2460.92Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T S       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR203.3e-2460.92Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T +       PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR199.5e-2459.77Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T +       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.2e-2460.92Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T         PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.6e-2656.12Show/hide
Query:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS
        M IR+  +L ++KQ+LK  + S      +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +FI+L SRL TS
Subjt:  MGIRLPSLLLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS

AT4G38840.1 SAUR-like auxin-responsive protein family7.9e-2655.67Show/hide
Query:  MGIRLPSLLLNAKQVLK----MHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSR
        M IR+P +L ++KQ+L+    + + S      VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E++FI+L SR
Subjt:  MGIRLPSLLLNAKQVLK----MHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family2.3e-2560.92Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T +       PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ

AT5G18030.1 SAUR-like auxin-responsive protein family3.0e-2560.92Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T S       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family3.0e-2560.92Show/hide
Query:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ
        LL AK++L   T         PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTAATTCATTGGAACAAGTGGGACGGCTCTGCAGTAGTTAGGACGAGACAGGATGAAGTTTGTGTATTCACACCAAATGAGCAACTCCATGTGAGCATTGATGA
AGTAGGCCCTCTTAGACACCTACCTGATACTGTTTTCTTCTCACCACTTCTCCATTCTGAATCCATAAATACAGATAAAAAAACTTCAATCTCCACAACTCAAATTTCAA
ATAGATCCTCCTTCAAGTACTACACTTCCCAACTTCTAGATCTGCATCAAGCAGAAAGCCTTTCAAAATTAGATATGGGAATCAGACTACCTTCACTTCTTCTCAATGCC
AAGCAAGTTCTAAAAATGCACACTGTTTCTTATAGAGGCCAATGTGGTGTTCCCAAAGGCCATATTGCAGTATATGTGGGAGATATTGAAAGGAAGCGATTTGTAGTTCC
AATATCATACTTGAACCATCCTTCTTTTTCTGCTTTGCTCAAGAGTGCTGAAGAAGAATTTGGATTCAAACATCCAACTGGAGGTTTGACAATTCCTTGCGGAGAAGATG
TCTTCATCAATCTCACATCCAGGCTTCAAACTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTAATTCATTGGAACAAGTGGGACGGCTCTGCAGTAGTTAGGACGAGACAGGATGAAGTTTGTGTATTCACACCAAATGAGCAACTCCATGTGAGCATTGATGA
AGTAGGCCCTCTTAGACACCTACCTGATACTGTTTTCTTCTCACCACTTCTCCATTCTGAATCCATAAATACAGATAAAAAAACTTCAATCTCCACAACTCAAATTTCAA
ATAGATCCTCCTTCAAGTACTACACTTCCCAACTTCTAGATCTGCATCAAGCAGAAAGCCTTTCAAAATTAGATATGGGAATCAGACTACCTTCACTTCTTCTCAATGCC
AAGCAAGTTCTAAAAATGCACACTGTTTCTTATAGAGGCCAATGTGGTGTTCCCAAAGGCCATATTGCAGTATATGTGGGAGATATTGAAAGGAAGCGATTTGTAGTTCC
AATATCATACTTGAACCATCCTTCTTTTTCTGCTTTGCTCAAGAGTGCTGAAGAAGAATTTGGATTCAAACATCCAACTGGAGGTTTGACAATTCCTTGCGGAGAAGATG
TCTTCATCAATCTCACATCCAGGCTTCAAACTTCCTGA
Protein sequenceShow/hide protein sequence
MIVIHWNKWDGSAVVRTRQDEVCVFTPNEQLHVSIDEVGPLRHLPDTVFFSPLLHSESINTDKKTSISTTQISNRSSFKYYTSQLLDLHQAESLSKLDMGIRLPSLLLNA
KQVLKMHTVSYRGQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCGEDVFINLTSRLQTS