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MS027944 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027944
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationscaffold375:1524850..1525143
RNA-Seq ExpressionMS027944
SyntenyMS027944
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4391.75Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
        MGIRLPSLLLNAKQIV+MQT SSRNQCGVPKGHIAVYVG+ ERKRFVVPISYLNHPSF ALLK+AEEEFGFKHPTGGLTIPCRED FINLTSRL TS
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS

KAG6605014.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4493.75Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT
        MGIRLPSLLLNAKQIVRMQT SSR+QCGVPKGHIAVYVGE ERKRFVVPISYLNHPSF ALLK+AEEEFGFKHPTGGLTIPCREDAF+NLTSRLHT
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT

XP_022146165.1 auxin-responsive protein SAUR21-like [Momordica charantia]1.0e-47100Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
        MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS

XP_023007087.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]1.6e-4594.79Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT
        MGIRLPSLLLNAKQ+VRMQT SSR+QCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLK+AEEEFGFKHPTGGLTIPCREDAF+NLTSRLHT
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT

XP_023533283.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]6.1e-4594.79Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT
        MGIRLPSLLLNAKQIVRMQT SSR+QCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLK+AEEEFGFKHPTG LTIPCREDAF+NLTSRLHT
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT

TrEMBL top hitse value%identityAlignment
A0A6J1CWI4 auxin-responsive protein SAUR21-like4.9e-48100Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
        MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS

A0A6J1FVH4 auxin-responsive protein SAUR21-like7.3e-4491.75Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
        MGIRLPSLLLNAKQIV+MQT SSRNQCGVPKGHIAVYVG+ ERKRFVVPISYLNHPSF ALLK+AEEEFGFKHPTGGLTIPCRED FINLTSRL TS
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS

A0A6J1FVI6 auxin-responsive protein SAUR21-like2.8e-4390.72Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
        MGIRLPSLLLNAKQIV+MQT SSRNQCGVPKGHIAVYVG+IERKRFVVPISYLNHPSF ALLK+AEEEFGFKHPTGGLTIPCRE+ FINLTS L TS
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS

A0A6J1JGW3 auxin-responsive protein SAUR21-like9.5e-4490.72Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
        MGIRLPSLLLNAKQ+V+MQT  SRNQCGVPKGHIAVYVG+IERKRFVVPISYLNHPSF ALLK+AEEEFGFKHPTGGLTIPCRED FINLTSRL TS
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS

A0A6J1KXM0 auxin-responsive protein SAUR21-like7.8e-4694.79Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT
        MGIRLPSLLLNAKQ+VRMQT SSR+QCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLK+AEEEFGFKHPTGGLTIPCREDAF+NLTSRLHT
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHT

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR234.7e-2462.07Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLH
        LL AK+I+    A+       PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRLH
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLH

Q9FJF7 Auxin-responsive protein SAUR223.6e-2461.63Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL
        LL AK+I+   TA+       PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRL
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL

Q9FJF9 Auxin-responsive protein SAUR212.8e-2462.79Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL
        LL AK+I+   TAS+      PKG +AVYVGE ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL

Q9FJG1 Auxin-responsive protein SAUR196.2e-2461.63Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL
        LL AK+I+   TA+       PKG +AVYVGE ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL

Q9FK62 Auxin-responsive protein SAUR243.6e-2461.63Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL
        LL AK+I+   T +       PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family6.1e-2757.14Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGE-IERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS
        M IR+  +L ++KQ+++  + SS N   +PKGH+AVYVGE ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E  FI+L SRL TS
Subjt:  MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGE-IERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS

AT4G38840.1 SAUR-like auxin-responsive protein family3.6e-2757.58Show/hide
Query:  MGIRLPSLLLNAKQIVR----MQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLH
        M IR+P +L ++KQI+R    + ++SS +   VPKG++AVYVGE   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E+ FI+L SR +
Subjt:  MGIRLPSLLLNAKQIVR----MQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLH

AT5G18030.1 SAUR-like auxin-responsive protein family2.0e-2562.79Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL
        LL AK+I+   TAS+      PKG +AVYVGE ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL

AT5G18050.1 SAUR-like auxin-responsive protein family2.6e-2561.63Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL
        LL AK+I+   TA+       PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRL
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family2.6e-2561.63Show/hide
Query:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL
        LL AK+I+   T +       PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL
Subjt:  LLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGGCTGCCTTCACTTCTCCTTAATGCCAAGCAAATTGTCAGAATGCAGACTGCTTCTTCTAGAAACCAATGTGGTGTTCCGAAAGGTCATATTGCAGTCTA
TGTGGGGGAGATTGAAAGGAAGCGATTCGTAGTTCCAATATCGTATTTGAACCATCCTTCTTTTGTAGCTCTGCTAAAGAGTGCTGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTCTGACAATTCCTTGCAGAGAAGATGCCTTCATCAATCTCACCTCTAGGCTGCATACTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGGCTGCCTTCACTTCTCCTTAATGCCAAGCAAATTGTCAGAATGCAGACTGCTTCTTCTAGAAACCAATGTGGTGTTCCGAAAGGTCATATTGCAGTCTA
TGTGGGGGAGATTGAAAGGAAGCGATTCGTAGTTCCAATATCGTATTTGAACCATCCTTCTTTTGTAGCTCTGCTAAAGAGTGCTGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTCTGACAATTCCTTGCAGAGAAGATGCCTTCATCAATCTCACCTCTAGGCTGCATACTTCCTGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQIVRMQTASSRNQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKSAEEEFGFKHPTGGLTIPCREDAFINLTSRLHTS