; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS027945 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027945
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationscaffold375:1526577..1526876
RNA-Seq ExpressionMS027945
SyntenyMS027945
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571047.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4388.89Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MGIRLPSSL+P AKQILKMQLGF KKQSDVVP+GHVAVYVGD QRKRFVVPVS+LNHPSFQQLLNRV+EEFG+HHPHGGLTIPCKE  FIDLTSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

KAG6571055.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4591.92Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MGIRLPSSL+P AKQILKMQLGF KKQSDVVPRGHVAVYVGD QRKRFVVPVS+LNHPSFQQLLNRVEEEFG+HHPHGGLTIPCKE AFIDLTSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

XP_022146114.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.6e-4898.98Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL
        MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLN+VEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL

XP_022944357.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]4.4e-4389.9Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MGIRLPSSL+  AKQILKMQLGF KKQSDVVPRGHVAVYVGD QRKRFVVPVS+LNHPSFQQLLNR EEEFG+HHPHGGLTIPCKE AFIDLTSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

XP_023512607.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]2.2e-4287.88Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MG+RL SSL+P AK+ILKMQLGF KKQSDVVPRGHVAVYVGD QRKRFVVPVS+LNHPSFQQLLNR EEEFG+HHPHGGLTIPCKE AFIDLTSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

TrEMBL top hitse value%identityAlignment
A0A6J1CX72 auxin-responsive protein SAUR24-like7.6e-4998.98Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL
        MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLN+VEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL

A0A6J1FVH8 auxin-responsive protein SAUR24-like2.2e-4389.9Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MGIRLPSSL+  AKQILKMQLGF KKQSDVVPRGHVAVYVGD QRKRFVVPVS+LNHPSFQQLLNR EEEFG+HHPHGGLTIPCKE AFIDLTSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

A0A6J1FXZ4 auxin-responsive protein SAUR24-like1.8e-4288.89Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MGIRLPSSL+P AKQILKMQLGF KKQSDVVPRGH AVYVGDIQRKRFVV VS+LNHPSFQQLLNRVEEEFG+HHP GGL IPCKE AFIDLTSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

A0A6J1JC24 auxin-responsive protein SAUR24-like1.3e-4086.87Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MGIRL SSL+P AKQILKMQLGF KKQSDVVPRGHVAVYVGD Q+KRFVVPVS+LNHP FQQLLNRV EEFG+HHPHGGLTIPCKE AFID TSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

A0A6J1JFS6 auxin-responsive protein SAUR21-like1.8e-4286.87Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS
        MGIRLPSSL+P  KQILKMQLGF KKQSDVVPRGHVAVYVGD QR+RFVVPVS+LNHPSFQQLLNRVEEEFG+HHPHGGLTI C+E  FIDLTSRLQ S
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR233.8e-2167.69Show/hide
Query:  PRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRL
        P+G +AVYVG+ Q+KR++VP+S+LN PSFQ LL++ EEEFGF HP GGLTIPC ED FI++TSRL
Subjt:  PRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR222.2e-2166.67Show/hide
Query:  PRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        P+G +AVYVG+ Q+KR++VP+S+LN PSFQ LL++ E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.3e-2156.47Show/hide
Query:  AKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        AK+IL      ++  +   P+G +AVYVG+ Q+KR++VP+S+L+ PSFQ LL++ EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR201.3e-2162.86Show/hide
Query:  SDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        +   P+G +AVYVG+ Q+KR++VP+S+LN PSFQ LL++ EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  SDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR249.1e-2360Show/hide
Query:  AKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        AK+IL    G         P+G +AVYVG+ Q+KR++VPVS+LN PSFQ LL++ EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.2e-2454.46Show/hide
Query:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDV-VPRGHVAVYVGD-IQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL
        M IR+ S ++ ++KQ+LK     +   ++V +P+GH+AVYVG+ +Q++RFVVPV++L+HP FQ+LL + EEEFGF HP GGLTIPC E  FIDL SRL  
Subjt:  MGIRLPSSLIPNAKQILKMQLGFTKKQSDV-VPRGHVAVYVGD-IQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQL

Query:  S
        S
Subjt:  S

AT4G34790.1 SAUR-like auxin-responsive protein family2.6e-2553.33Show/hide
Query:  LPSSLIPNAKQILKMQL----------GFTKKQSDVVPRGHVAVYVGD-IQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLT
        L  S++PNAKQI K Q             T   S +VP+GHVAVYVG+ +++KRFVVP+S+LNHP F++ LNR EEE GFHH  GGLTIPC+E++F+ L 
Subjt:  LPSSLIPNAKQILKMQL----------GFTKKQSDVVPRGHVAVYVGD-IQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLT

Query:  SRLQL
        +  QL
Subjt:  SRLQL

AT4G34810.1 SAUR-like auxin-responsive protein family1.5e-2560.2Show/hide
Query:  IPNA-KQILKM-----QLGFTKKQSDVVPRGHVAVYVG---DIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDL-TSRLQ
        I NA KQILK+     +   +   SD VP+GHVAVYVG   ++++KRFVVP+SFLNHPSF++ L+R EEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Subjt:  IPNA-KQILKM-----QLGFTKKQSDVVPRGHVAVYVG---DIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDL-TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family4.9e-2456.12Show/hide
Query:  MGIRLPSSLIPNAKQIL---KMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSR
        M IR+P  ++ ++KQIL   K+    +   S  VP+G++AVYVG+   KRFVVPVS+L+ PSFQ LL + EEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRLPSSLIPNAKQIL---KMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family6.4e-2460Show/hide
Query:  AKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        AK+IL    G         P+G +AVYVG+ Q+KR++VPVS+LN PSFQ LL++ EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGTTTACCATCATCTCTGATTCCTAATGCCAAGCAAATTCTAAAGATGCAGTTGGGATTTACCAAGAAGCAGTCAGATGTTGTTCCTAGAGGTCATGTTGC
AGTATATGTGGGAGATATCCAGAGGAAGCGATTTGTGGTTCCTGTTTCGTTCTTGAACCATCCTTCATTCCAACAACTACTCAACCGAGTAGAAGAAGAGTTCGGTTTCC
ATCATCCACATGGAGGTCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTACAACTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGTTTACCATCATCTCTGATTCCTAATGCCAAGCAAATTCTAAAGATGCAGTTGGGATTTACCAAGAAGCAGTCAGATGTTGTTCCTAGAGGTCATGTTGC
AGTATATGTGGGAGATATCCAGAGGAAGCGATTTGTGGTTCCTGTTTCGTTCTTGAACCATCCTTCATTCCAACAACTACTCAACCGAGTAGAAGAAGAGTTCGGTTTCC
ATCATCCACATGGAGGTCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTACAACTCTCTTGA
Protein sequenceShow/hide protein sequence
MGIRLPSSLIPNAKQILKMQLGFTKKQSDVVPRGHVAVYVGDIQRKRFVVPVSFLNHPSFQQLLNRVEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQLS