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MS027946 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS027946
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationscaffold375:1527711..1528001
RNA-Seq ExpressionMS027946
SyntenyMS027946
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457639.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.8e-4495.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLL RS EEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

XP_011649278.1 auxin-responsive protein SAUR21 [Cucumis sativus]1.3e-4495.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKG+IAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS EEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

XP_022146171.1 auxin-responsive protein SAUR21-like [Momordica charantia]1.2e-4598.97Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

XP_038901157.1 auxin-responsive protein SAUR21-like [Benincasa hispida]3.0e-4494.85Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKG+IAVYVGEIQRKRFVVPISYLKHPSFVDLLN+S EEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

XP_038901158.1 auxin-responsive protein SAUR21-like [Benincasa hispida]8.7e-4492.78Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKG+IAVYVGEIQRKRFV+PISYLKHPSFVDLLNRS EEFGFCHPMGGLTIPCRED FINLT+R+HTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

TrEMBL top hitse value%identityAlignment
A0A1S3C631 auxin-responsive protein SAUR21-like8.5e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLL RS EEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

A0A1S4E2E4 auxin-responsive protein SAUR21-like5.5e-4494.85Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKG+IAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS EEFGFCHP GGLTIPCREDAFINLT++LHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

A0A5A7TQ57 Auxin-responsive protein SAUR21-like5.5e-4494.85Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKG+IAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS EEFGFCHP GGLTIPCREDAFINLT++LHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

A0A5D3BIN4 Auxin-responsive protein SAUR21-like8.5e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLL RS EEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

A0A6J1CYI0 auxin-responsive protein SAUR21-like5.9e-4698.97Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.8e-2365.52Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLH
        LL AK+IL   + SA   S  PKG++AVYVGE Q+KR++VP+SYL  PSF  LL++S EEFGF HPMGGLTIPC ED FIN+TSRLH
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLH

Q9FJF7 Auxin-responsive protein SAUR228.8e-2363.95Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSE-EFGFCHPMGGLTIPCREDAFINLTSRL
        LL AK+IL   + S    S  PKG++AVYVGE Q+KR++VP+SYL  PSF  LL++SE EFGF HPMGGLTIPC ED FIN+TSRL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSE-EFGFCHPMGGLTIPCREDAFINLTSRL

Q9FJF9 Auxin-responsive protein SAUR218.8e-2363.95Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRL
        LL AK+IL     SA      PKG++AVYVGE Q+KR++VP+SYL  PSF  LL++S EEFGF HPMGGLTIPC ED FIN+TSRL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRL

Q9FJG0 Auxin-responsive protein SAUR208.8e-2364.71Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSR
        LL AK+IL     +A   S  PKG++AVYVGE Q+KR++VPISYL  PSF  LL++S EEFGF HPMGGLTIPC ED FIN+TSR
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSR

Q9FJG1 Auxin-responsive protein SAUR196.7e-2363.95Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRL
        LL AK+IL   + S    S  PKG++AVYVGE Q+KR++VP+SYL  PSF  LL++S EEFGF HPMGGLTIPC ED FIN+TSRL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family7.4e-2557.14Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGE-IQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS
        M IR+  +L ++KQ+LK  + S+ N + +PKG++AVYVGE +Q++RFVVP++YL HP F  LL ++ EEFGF HPMGGLTIPC E  FI+L SRL TS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGE-IQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLHTS

AT4G38840.1 SAUR-like auxin-responsive protein family1.0e-2658.59Show/hide
Query:  MGIRLPSILLNAKQILK----MQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLH
        M IR+P +L ++KQIL+    + + S+ +  DVPKGY+AVYVGE   KRFVVP+SYL  PSF DLL ++ EEFGF HPMGGLTIPC E+ FI+L SR +
Subjt:  MGIRLPSILLNAKQILK----MQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLH

AT5G18010.1 SAUR-like auxin-responsive protein family4.8e-2463.95Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRL
        LL AK+IL   + S    S  PKG++AVYVGE Q+KR++VP+SYL  PSF  LL++S EEFGF HPMGGLTIPC ED FIN+TSRL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRL

AT5G18020.1 SAUR-like auxin-responsive protein family6.2e-2464.71Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSR
        LL AK+IL     +A   S  PKG++AVYVGE Q+KR++VPISYL  PSF  LL++S EEFGF HPMGGLTIPC ED FIN+TSR
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSR

AT5G18060.1 SAUR-like auxin-responsive protein family1.3e-2465.52Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLH
        LL AK+IL   + SA   S  PKG++AVYVGE Q+KR++VP+SYL  PSF  LL++S EEFGF HPMGGLTIPC ED FIN+TSRLH
Subjt:  LLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRS-EEFGFCHPMGGLTIPCREDAFINLTSRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTGCCATCAATTCTTCTTAACGCGAAACAGATTCTGAAAATGCAAGCTATGTCTGCCAGAAATCAGTCAGATGTTCCTAAAGGCTACATTGCAGTTTA
TGTGGGAGAGATTCAGAGGAAGAGATTTGTGGTACCTATTTCGTACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGGTCAGAAGAGTTCGGATTCTGCCATCCAA
TGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCCTTCATAAATCTAACTTCTAGGCTGCACACATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTGCCATCAATTCTTCTTAACGCGAAACAGATTCTGAAAATGCAAGCTATGTCTGCCAGAAATCAGTCAGATGTTCCTAAAGGCTACATTGCAGTTTA
TGTGGGAGAGATTCAGAGGAAGAGATTTGTGGTACCTATTTCGTACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGGTCAGAAGAGTTCGGATTCTGCCATCCAA
TGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCCTTCATAAATCTAACTTCTAGGCTGCACACATCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSILLNAKQILKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEFGFCHPMGGLTIPCREDAFINLTSRLHTS