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MS028007 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028007
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold382:319094..319885
RNA-Seq ExpressionMS028007
SyntenyMS028007
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592153.1 hypothetical protein SDJN03_14499, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3139.76Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------
        M TLN LLR   E+GN SH FSHNW  FWP  V  I FLF  SI+ST  V+ TV A+Y+G+EPS K T S+                             
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------

Query:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTALM
                                                     SCGFKAMAKSRLLLKGK  +A  +V  I  SFGI++WL+   + M+F P +   M
Subjt:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTALM

Query:  HALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLSTT
        +   NL L+ L+LVFLLW+LVLET+ Y VCKS  QESID+  LSD+  +PL ++
Subjt:  HALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLSTT

KAG7025017.1 hypothetical protein SDJN02_13838, partial [Cucurbita argyrosperma subsp. argyrosperma]9.7e-2839.75Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------
        M TLN LLR   E+GN SH FSHNW  FWP  V  I FLF  SI+ST  V+ TV A+Y+G+EPS K T S+                             
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------

Query:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTALM
                                                     SCGFKAMAKSRLLLKGK  +A  +V  I  SFGI++WL+   + M+F P +   M
Subjt:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTALM

Query:  HALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESID
        +   NL L+ L+LVFLLW+LVLET+ Y VCKS   ESID
Subjt:  HALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESID

XP_022153701.1 uncharacterized protein LOC111021153 [Momordica charantia]2.5e-3659.63Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------
        MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL                             
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------

Query:  ------------------------------------SCGFKAMAKSRLLLKGKAAAAATIV
                                            SCGFKAMAKSRLLLKGKAAAAATIV
Subjt:  ------------------------------------SCGFKAMAKSRLLLKGKAAAAATIV

XP_022936737.1 uncharacterized protein LOC111443241 [Cucurbita moschata]7.4e-2838.1Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------
        M TLN LLR   E+GN SH FSHNW  FWP  V  I+F+F YSI ST  V+  VAA+Y+G+E S K   S+                             
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------

Query:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL-
                                                     SCGF+AMAKSRLLLKGK  +A  +V  I  SFGI++WL+ + R+M   P++ +L 
Subjt:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL-

Query:  ---MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDY
           +H   +L L+ L+LVFLLW+LVLET+ Y VCKS  QESID+  LSD+++
Subjt:  ---MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDY

XP_023535683.1 uncharacterized protein LOC111797044 [Cucurbita pepo subsp. pepo]1.6e-3038.98Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------
        M TLN LLR   E+GN SH FSHNW  FWP  V  I FLF  SI+ST  V+ TV A+Y+G+EPS K T S+                             
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------

Query:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTALM
                                                     SCGF+AMAKSRLLLKGK  +A  +V  I  SFGI++WL+   + M+F P +   M
Subjt:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTALM

Query:  HALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLSTT
        +   NL L+ L+LVFLLW+LVLET+ Y VCKS  QESID+   SD+  +PL ++
Subjt:  HALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLSTT

TrEMBL top hitse value%identityAlignment
A0A0A0KJQ4 Uncharacterized protein3.5e-2336.33Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFF-WPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL----------------------------
        M TLN +LR   ++GN SH FS ++ F  WP D+I+I FLF +SI+ST  V+ TVA +YTGQEPS   T S+                            
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFF-WPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL----------------------------

Query:  ----------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL
                                                      S GFKAM  SRLLLK    +A  IV  I   FGI++WL+++ ++M+F P    +
Subjt:  ----------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL

Query:  -MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLSTT
         M+ L +L L FL+LVFLLW+LV ET++YLVCKS   ESID + LSD D + L ++
Subjt:  -MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLSTT

A0A1S3CMT6 uncharacterized protein LOC1035022624.6e-2337.5Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNW-PFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL----------------------------
        M TLN +LR   ++GN SH FS N+    +P D+I I FLF +SI+ST  V+ TVAA+Y GQEPS K   S+                            
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNW-PFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL----------------------------

Query:  ----------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL
                                                      S GFKAMAKSRLLLK    +A  IV  I   FGI++WLE++ R+M+F    T  
Subjt:  ----------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL

Query:  --MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLST
          MH L +L L  L+LVFLLW+LV ET++Y VCKS   E IDMS +SD D I L +
Subjt:  --MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLST

A0A5D3DZ60 Putative transmembrane protein4.6e-2337.5Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNW-PFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL----------------------------
        M TLN +LR   ++GN SH FS N+    +P D+I I FLF +SI+ST  V+ TVAA+Y GQEPS K   S+                            
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNW-PFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL----------------------------

Query:  ----------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL
                                                      S GFKAMAKSRLLLK    +A  IV  I   FGI++WLE++ R+M+F    T  
Subjt:  ----------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL

Query:  --MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLST
          MH L +L L  L+LVFLLW+LV ET++Y VCKS   E IDMS +SD D I L +
Subjt:  --MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLST

A0A6J1DLH2 uncharacterized protein LOC1110211531.2e-3659.63Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------
        MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL                             
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------

Query:  ------------------------------------SCGFKAMAKSRLLLKGKAAAAATIV
                                            SCGFKAMAKSRLLLKGKAAAAATIV
Subjt:  ------------------------------------SCGFKAMAKSRLLLKGKAAAAATIV

A0A6J1F996 uncharacterized protein LOC1114432413.6e-2838.1Show/hide
Query:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------
        M TLN LLR   E+GN SH FSHNW  FWP  V  I+F+F YSI ST  V+  VAA+Y+G+E S K   S+                             
Subjt:  MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSL-----------------------------

Query:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL-
                                                     SCGF+AMAKSRLLLKGK  +A  +V  I  SFGI++WL+ + R+M   P++ +L 
Subjt:  ---------------------------------------------SCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLESVAREMIFWPWMTAL-

Query:  ---MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDY
           +H   +L L+ L+LVFLLW+LVLET+ Y VCKS  QESID+  LSD+++
Subjt:  ---MHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACCTTAAATCTCCTCCTAAGAAAGTTCCTTGAACATGGGAACTTCTCACATTTCTTCTCCCACAATTGGCCCTTCTTTTGGCCCTCCGACGTCATCAACATCCT
ATTCCTTTTCTGTTATTCTATCGTCTCCACCACCGCCGTGGCTCACACCGTCGCTGCCGTCTACACCGGCCAAGAGCCGTCCCCCAAGGGCACAACCAGCCTCTCGTGTG
GGTTTAAGGCCATGGCGAAGAGTAGGTTGCTGTTGAAGGGAAAGGCGGCGGCGGCGGCCACGATTGTATTTGTGATTTGTTTGAGTTTTGGGATAATTATGTGGTTGGAA
TCTGTTGCTAGGGAGATGATTTTTTGGCCATGGATGACTGCATTGATGCATGCGTTGGTGAACTTGTTGTTGGTGTTCTTGGTTTTGGTGTTCTTGTTATGGAAGCTCGT
GTTGGAGACGGTGCTGTATTTGGTCTGTAAATCGAACCTTCAAGAGAGTATCGACATGTCGGTTCTCTCAGATGAAGATTATATTCCATTGAGTACCACATTGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACCTTAAATCTCCTCCTAAGAAAGTTCCTTGAACATGGGAACTTCTCACATTTCTTCTCCCACAATTGGCCCTTCTTTTGGCCCTCCGACGTCATCAACATCCT
ATTCCTTTTCTGTTATTCTATCGTCTCCACCACCGCCGTGGCTCACACCGTCGCTGCCGTCTACACCGGCCAAGAGCCGTCCCCCAAGGGCACAACCAGCCTCTCGTGTG
GGTTTAAGGCCATGGCGAAGAGTAGGTTGCTGTTGAAGGGAAAGGCGGCGGCGGCGGCCACGATTGTATTTGTGATTTGTTTGAGTTTTGGGATAATTATGTGGTTGGAA
TCTGTTGCTAGGGAGATGATTTTTTGGCCATGGATGACTGCATTGATGCATGCGTTGGTGAACTTGTTGTTGGTGTTCTTGGTTTTGGTGTTCTTGTTATGGAAGCTCGT
GTTGGAGACGGTGCTGTATTTGGTCTGTAAATCGAACCTTCAAGAGAGTATCGACATGTCGGTTCTCTCAGATGAAGATTATATTCCATTGAGTACCACATTGAACTGA
Protein sequenceShow/hide protein sequence
MGTLNLLLRKFLEHGNFSHFFSHNWPFFWPSDVINILFLFCYSIVSTTAVAHTVAAVYTGQEPSPKGTTSLSCGFKAMAKSRLLLKGKAAAAATIVFVICLSFGIIMWLE
SVAREMIFWPWMTALMHALVNLLLVFLVLVFLLWKLVLETVLYLVCKSNLQESIDMSVLSDEDYIPLSTTLN