; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028021 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028021
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionL10-interacting MYB domain-containing protein-like
Genome locationscaffold290:591247..592028
RNA-Seq ExpressionMS028021
SyntenyMS028021
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOX90801.1 Radiation sensitive 17, putative [Theobroma cacao]1.2e-3936.92Show/hide
Query:  SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR
        S  RWT+   KILA+L++E+V RG ++        WK +CD+FC+KTS+ WD EQLKN+Y V+R+QY++V+S+  + DFSW  +TG ++  D+ WA+  +
Subjt:  SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR

Query:  --------VTMNCPTYEELCIMFS-------------------------------------------NFDDGQEITSQPTKPNSSNSHKRGRKSDED---
                 T  CP Y++LC +FS                                           +  D Q+ T QP+ P    + KRGRK  +D   
Subjt:  --------VTMNCPTYEELCIMFS-------------------------------------------NFDDGQEITSQPTKPNSSNSHKRGRKSDED---

Query:  ---------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC
                             A Y IA CIK   E+DE+ G+EE VYF AL LFN PNARE FL LK DKR  WLQR C
Subjt:  ---------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC

KAF3974668.1 hypothetical protein CMV_002013 [Castanea mollissima]2.8e-3636.63Show/hide
Query:  RWTSIRAKILANLIIERVLRGRKELE------WKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR---
        RWT+   KILA+L+I +V +G ++        W+ I DEF +KT + WD EQLKN+YAV+R+QY+ V+S+  + DFSW   TG I+A D+ W +  R   
Subjt:  RWTSIRAKILANLIIERVLRGRKELE------WKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR---

Query:  -----VTMNCPTYEELCIMFS--------------------------------NFDDGQEI--------TSQPTKPNSSNSHKRGRKSDED---------
                 CP Y+ELC++FS                                +  D  E+        T+QPT P S+ + KRGRK  +D         
Subjt:  -----VTMNCPTYEELCIMFS--------------------------------NFDDGQEI--------TSQPTKPNSSNSHKRGRKSDED---------

Query:  ---------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC
                       A + IADCI+   E+DEM G++E VY  AL LFN+PNARE FL LK DKR  WL+  C
Subjt:  ---------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC

XP_017977880.1 PREDICTED: L10-interacting MYB domain-containing protein-like [Theobroma cacao]4.6e-3936.56Show/hide
Query:  SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR
        S  RWT+   KILA+L++E+V RG ++        WK +CD+FC+KTS+ WD EQLKN+Y V+R+QY++V+S+  + DFSW  +TG ++  D+ WA+  +
Subjt:  SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR

Query:  --------VTMNCPTYEELCIMFS-------------------------------------------NFDDGQEITSQPTKPNSSNSHKRGRKSDED---
                 T  CP Y++LC +FS                                           +  D Q+ T QP+ P    + KRGRK  +D   
Subjt:  --------VTMNCPTYEELCIMFS-------------------------------------------NFDDGQEITSQPTKPNSSNSHKRGRKSDED---

Query:  ---------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC
                             A Y IA CIK   E++E+ G+EE VYF AL LFN PNARE FL LK DKR  WLQR C
Subjt:  ---------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC

XP_022145264.1 uncharacterized protein LOC111014759 isoform X1 [Momordica charantia]3.7e-6565.12Show/hide
Query:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV
        M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRKQYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   +
Subjt:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV

Query:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF
         +   TYE+LC +FSN D GQE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLEE +YFGALVLF EPN RETF
Subjt:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF

Query:  LCLKEDKRYNWLQRN
        L LK DK  NWLQRN
Subjt:  LCLKEDKRYNWLQRN

XP_022145265.1 uncharacterized protein LOC111014759 isoform X2 [Momordica charantia]2.1e-6064.71Show/hide
Query:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV
        M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRKQYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   +
Subjt:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV

Query:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF
         +   TYE+LC +FSN D GQE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLEE +YFGALVLF EPN RETF
Subjt:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF

Query:  LCLK
        L LK
Subjt:  LCLK

TrEMBL top hitse value%identityAlignment
A0A061DGI7 Radiation sensitive 17, putative5.9e-4036.92Show/hide
Query:  SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR
        S  RWT+   KILA+L++E+V RG ++        WK +CD+FC+KTS+ WD EQLKN+Y V+R+QY++V+S+  + DFSW  +TG ++  D+ WA+  +
Subjt:  SDQRWTSIRAKILANLIIERVLRGRKE------LEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR

Query:  --------VTMNCPTYEELCIMFS-------------------------------------------NFDDGQEITSQPTKPNSSNSHKRGRKSDED---
                 T  CP Y++LC +FS                                           +  D Q+ T QP+ P    + KRGRK  +D   
Subjt:  --------VTMNCPTYEELCIMFS-------------------------------------------NFDDGQEITSQPTKPNSSNSHKRGRKSDED---

Query:  ---------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC
                             A Y IA CIK   E+DE+ G+EE VYF AL LFN PNARE FL LK DKR  WLQR C
Subjt:  ---------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC

A0A2N9J0Q6 Myb_DNA-bind_3 domain-containing protein2.3e-3637.18Show/hide
Query:  MSDQRWTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKI-
        +S  RWT+   KILA+L+I +V +G +      +  W+ ICDEF +KT + WD EQLKN+YAV+R+QY+ V+S+  + DF+W   TG IVA D+ WA+  
Subjt:  MSDQRWTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKI-

Query:  -------ARVTMNCPTYEELCIMFS------NFD--------------------------DGQEI--------TSQPTKPNSSNSHKRGRKSDED-----
               A     CP Y+ELC++FS      N D                          D  E+        T+QP  P +  + KRGRK  +D     
Subjt:  -------ARVTMNCPTYEELCIMFS------NFD--------------------------DGQEI--------TSQPTKPNSSNSHKRGRKSDED-----

Query:  -------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC
                           A Y IADCI+   E+D M G++E VY  AL LFN+PNARE FL LK DKR  WL+  C
Subjt:  -------------------ATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC

A0A6J1CTZ5 uncharacterized protein LOC111014759 isoform X21.0e-6064.71Show/hide
Query:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV
        M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRKQYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   +
Subjt:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV

Query:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF
         +   TYE+LC +FSN D GQE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLEE +YFGALVLF EPN RETF
Subjt:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF

Query:  LCLK
        L LK
Subjt:  LCLK

A0A6J1CUQ3 uncharacterized protein LOC111014759 isoform X11.8e-6565.12Show/hide
Query:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV
        M+D  WTS  AKIL  LIIE+V RGRKELEW  ICDEFC ++ + WD EQLK+QYAVMRKQYLIV+S+F RDDFSW  +TGIIVAT    D R+ +   +
Subjt:  MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVAT----DDRWAKIARV

Query:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF
         +   TYE+LC +FSN D GQE TSQPTKPNSSNS KRGR             KS EDATY IADCIK LDEI +MHGLEE +YFGALVLF EPN RETF
Subjt:  TMNCPTYEELCIMFSNFDDGQEITSQPTKPNSSNSHKRGR-------------KSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETF

Query:  LCLKEDKRYNWLQRN
        L LK DK  NWLQRN
Subjt:  LCLKEDKRYNWLQRN

A0A6P5YIE1 L10-interacting MYB domain-containing protein-like1.3e-3635.61Show/hide
Query:  SDQRWTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR
        S  RWT+   K LA++++E+V RG +      +  WK +CD+FC+KT + WD EQLKN+Y V+R+QY++V+S+     FSW  +TG I+  D+ WA   +
Subjt:  SDQRWTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR

Query:  --------VTMNCPTYEELCIMFS----------NFDDGQEITS--------------------------------QPTKPNSSNSHKRGRKSDEDA---
                 +  C  Y++LC +FS          + + G+E+ S                                QP+ P   +S KRGRK  +DA   
Subjt:  --------VTMNCPTYEELCIMFS----------NFDDGQEITS--------------------------------QPTKPNSSNSHKRGRKSDEDA---

Query:  ---------------------TYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC
                              Y IA CIK   E+DEM G+EE VYF AL LFN PNARE FL LK DKR  WL R C
Subjt:  ---------------------TYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02210.1 unknown protein6.5e-0720.8Show/hide
Query:  WTSIRAKILANLIIERVLRGR------KELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR----
        W     +   +L++++  RG       ++  W  + + F  K    +DV+ LKN+Y  +R+Q+  ++S+   D F+W     ++ A ++ W    +    
Subjt:  WTSIRAKILANLIIERVLRGR------KELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR----

Query:  ----VTMNCPTYEELCIM-----------------FSNFDDGQEITSQPT-------KPNSSNS------HKRGR--------------KSDEDATYKIA
            +T   P Y++LC++                 F    + QE  S  T       +   SNS      +KR +              + DE  T  I 
Subjt:  ----VTMNCPTYEELCIM-----------------FSNFDDGQEITSQPT-------KPNSSNS------HKRGR--------------KSDEDATYKIA

Query:  DCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQR
        D ++ +  + +M   ++ +   A  L  +    +TFL L    R  WL R
Subjt:  DCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQR

AT4G02210.2 unknown protein6.5e-0720.8Show/hide
Query:  WTSIRAKILANLIIERVLRGR------KELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR----
        W     +   +L++++  RG       ++  W  + + F  K    +DV+ LKN+Y  +R+Q+  ++S+   D F+W     ++ A ++ W    +    
Subjt:  WTSIRAKILANLIIERVLRGR------KELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIAR----

Query:  ----VTMNCPTYEELCIM-----------------FSNFDDGQEITSQPT-------KPNSSNS------HKRGR--------------KSDEDATYKIA
            +T   P Y++LC++                 F    + QE  S  T       +   SNS      +KR +              + DE  T  I 
Subjt:  ----VTMNCPTYEELCIM-----------------FSNFDDGQEITSQPT-------KPNSSNS------HKRGR--------------KSDEDATYKIA

Query:  DCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQR
        D ++ +  + +M   ++ +   A  L  +    +TFL L    R  WL R
Subjt:  DCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQR

AT5G05800.1 unknown protein5.1e-0426.09Show/hide
Query:  WTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWA
        W     ++  +L +E+ + G K      +  W+ I   F  +T   +D  QLKN +  M +Q+ I + +      +W   +    ATDD WA
Subjt:  WTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWA

AT5G05800.2 unknown protein5.1e-0426.09Show/hide
Query:  WTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWA
        W     ++  +L +E+ + G K      +  W+ I   F  +T   +D  QLKN +  M +Q+ I + +      +W   +    ATDD WA
Subjt:  WTSIRAKILANLIIERVLRGRK------ELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACCAACGGTGGACATCAATCCGTGCCAAGATACTTGCGAATTTGATAATTGAACGAGTGCTGAGAGGAAGGAAAGAATTGGAATGGAAGCTTATATGTGATGA
GTTCTGCAGGAAAACAAGTATGACATGGGATGTAGAACAACTGAAGAACCAATATGCTGTTATGAGAAAGCAGTACCTAATTGTGCAGTCGATGTTTCATCGGGACGACT
TCTCGTGGCGTGGAAATACCGGGATTATTGTGGCCACAGATGATAGGTGGGCCAAAATTGCTAGGGTAACGATGAATTGTCCAACATATGAAGAGTTATGCATAATGTTC
TCCAATTTTGATGATGGTCAAGAAATTACGAGTCAACCTACCAAACCCAATTCATCAAATAGTCACAAAAGAGGGAGGAAGTCAGACGAAGATGCAACATATAAAATAGC
AGATTGTATTAAAGGATTGGATGAAATTGATGAAATGCATGGACTTGAAGAAGGTGTTTATTTTGGAGCTTTGGTACTGTTCAATGAACCAAATGCCAGAGAGACCTTCC
TTTGTCTCAAGGAAGATAAACGCTATAACTGGCTGCAGAGGAACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACCAACGGTGGACATCAATCCGTGCCAAGATACTTGCGAATTTGATAATTGAACGAGTGCTGAGAGGAAGGAAAGAATTGGAATGGAAGCTTATATGTGATGA
GTTCTGCAGGAAAACAAGTATGACATGGGATGTAGAACAACTGAAGAACCAATATGCTGTTATGAGAAAGCAGTACCTAATTGTGCAGTCGATGTTTCATCGGGACGACT
TCTCGTGGCGTGGAAATACCGGGATTATTGTGGCCACAGATGATAGGTGGGCCAAAATTGCTAGGGTAACGATGAATTGTCCAACATATGAAGAGTTATGCATAATGTTC
TCCAATTTTGATGATGGTCAAGAAATTACGAGTCAACCTACCAAACCCAATTCATCAAATAGTCACAAAAGAGGGAGGAAGTCAGACGAAGATGCAACATATAAAATAGC
AGATTGTATTAAAGGATTGGATGAAATTGATGAAATGCATGGACTTGAAGAAGGTGTTTATTTTGGAGCTTTGGTACTGTTCAATGAACCAAATGCCAGAGAGACCTTCC
TTTGTCTCAAGGAAGATAAACGCTATAACTGGCTGCAGAGGAACTGTTGA
Protein sequenceShow/hide protein sequence
MSDQRWTSIRAKILANLIIERVLRGRKELEWKLICDEFCRKTSMTWDVEQLKNQYAVMRKQYLIVQSMFHRDDFSWRGNTGIIVATDDRWAKIARVTMNCPTYEELCIMF
SNFDDGQEITSQPTKPNSSNSHKRGRKSDEDATYKIADCIKGLDEIDEMHGLEEGVYFGALVLFNEPNARETFLCLKEDKRYNWLQRNC