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MS028025 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028025
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmethionine gamma-lyase-like
Genome locationscaffold290:747573..747968
RNA-Seq ExpressionMS028025
SyntenyMS028025
Gene Ontology termsGO:0019343 - cysteine biosynthetic process via cystathionine (biological process)
GO:0019346 - transsulfuration (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004123 - cystathionine gamma-lyase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsIPR000277 - Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR015422 - Pyridoxal phosphate-dependent transferase, small domain
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33936.1 cystathionine gamma-synthase [Cucumis melo subsp. melo]4.5e-5188.39Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LAN EYGFGGMLC+DMGTEERAN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD+G+PFCNN
Subjt:  KVQDMGLPFCNN

KAA0052969.1 methionine gamma-lyase-like [Cucumis melo var. makuwa]4.5e-5188.39Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LAN EYGFGGMLC+DMGTEERAN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD+G+PFCNN
Subjt:  KVQDMGLPFCNN

NP_001315378.1 methionine gamma-lyase-like [Cucumis melo]4.5e-5188.39Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LAN EYGFGGMLC+DMGTEERAN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD+G+PFCNN
Subjt:  KVQDMGLPFCNN

XP_004146134.1 methionine gamma-lyase [Cucumis sativus]8.5e-5086.61Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LA+ EYGFGGMLC+DMGTEE+AN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD G+PFCNN
Subjt:  KVQDMGLPFCNN

XP_022145293.1 methionine gamma-lyase-like [Momordica charantia]1.6e-5699.12Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMN EEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNNN
        KVQDMGLPFCNNN
Subjt:  KVQDMGLPFCNNN

TrEMBL top hitse value%identityAlignment
A0A1S3BKU9 methionine gamma-lyase-like2.2e-5188.39Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LAN EYGFGGMLC+DMGTEERAN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD+G+PFCNN
Subjt:  KVQDMGLPFCNN

A0A5A7UHF4 Methionine gamma-lyase-like2.2e-5188.39Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LAN EYGFGGMLC+DMGTEERAN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD+G+PFCNN
Subjt:  KVQDMGLPFCNN

A0A6J1CVK1 methionine gamma-lyase-like7.7e-5799.12Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMN EEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNNN
        KVQDMGLPFCNNN
Subjt:  KVQDMGLPFCNNN

E5RDC8 Cystathionine gamma-synthase2.2e-5188.39Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LAN EYGFGGMLC+DMGTEERAN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD+G+PFCNN
Subjt:  KVQDMGLPFCNN

M1NFB7 Methionine gamma-lyase2.2e-5188.39Show/hide
Query:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA
        MK LAN EYGFGGMLC+DMGTEERAN+LMS+LQN TQFGFMAVSLGYYETLMSCSGSSTSSEM+GEE++LAGISPGL+RMSIGYMGT EQKWSQFEKALA
Subjt:  MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALA

Query:  KVQDMGLPFCNN
        KVQD+G+PFCNN
Subjt:  KVQDMGLPFCNN

SwissProt top hitse value%identityAlignment
O05394 Cystathionine gamma-lyase3.9e-0537.84Show/hide
Query:  GFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIG
        GFGGM+  D+G+EER +  +     N +   +A SLG  E+L+S     T + +  E +   GI+ GLIR+S+G
Subjt:  GFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIG

Q5SJ58 O-acetyl-L-homoserine sulfhydrylase 24.3e-0432.97Show/hide
Query:  GGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAKV
        G +L LD+G  ERA+R +  ++        A +LG   TL+    ++T S +  E +  AG++PGL+R+S+G     +   + FE+AL  V
Subjt:  GGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAKV

Q8L0X4 L-methionine gamma-lyase5.1e-0534.78Show/hide
Query:  FGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAKV
        FG M+  ++     A +    L NN +   +AVSLG  ETL+    S T S    EE++ AGI+ GL+R+S+G +   E   +  E+ L K+
Subjt:  FGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAKV

Q8RDT4 L-methionine gamma-lyase3.0e-0534.78Show/hide
Query:  FGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAKV
        FG M+  ++     A +    L NN +   +AVSLG  ETL+    S T S    EE+++AGI+ GL+R+S+G +   E   +  E+ L K+
Subjt:  FGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAKV

Q9SGU9 Methionine gamma-lyase8.6e-3769.31Show/hide
Query:  KRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAK
        K + N +YG+GG+L +DM TEE+AN+LM+ LQN TQFGFMAVSLGYYETLMSCSGSSTSSE++  +K+ AGISPGL+RMS+GY+GT EQKW+QFEKA  +
Subjt:  KRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAK

Query:  V
        +
Subjt:  V

Arabidopsis top hitse value%identityAlignment
AT1G64660.1 methionine gamma-lyase6.1e-3869.31Show/hide
Query:  KRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAK
        K + N +YG+GG+L +DM TEE+AN+LM+ LQN TQFGFMAVSLGYYETLMSCSGSSTSSE++  +K+ AGISPGL+RMS+GY+GT EQKW+QFEKA  +
Subjt:  KRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAK

Query:  V
        +
Subjt:  V


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGCTTGCAAACTCGGAGTATGGGTTCGGGGGGATGTTGTGCTTAGACATGGGAACTGAGGAAAGAGCCAACAGGCTCATGAGCGTGCTCCAAAACAACACCCA
ATTCGGGTTCATGGCAGTGAGTTTAGGGTACTATGAGACCCTCATGTCGTGCTCGGGTAGCAGCACGAGTAGTGAGATGAACGGGGAGGAGAAGCAACTGGCTGGGATCT
CACCCGGACTCATAAGAATGTCCATTGGATATATGGGTACGTTCGAGCAAAAATGGAGCCAATTTGAGAAGGCTCTTGCTAAAGTGCAAGATATGGGCCTTCCATTTTGC
AACAATAACTAATTTTAGTACAACAAATGTGAGGTGTGAGAATTTGAACATTCAACTTTAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGCTTGCAAACTCGGAGTATGGGTTCGGGGGGATGTTGTGCTTAGACATGGGAACTGAGGAAAGAGCCAACAGGCTCATGAGCGTGCTCCAAAACAACACCCA
ATTCGGGTTCATGGCAGTGAGTTTAGGGTACTATGAGACCCTCATGTCGTGCTCGGGTAGCAGCACGAGTAGTGAGATGAACGGGGAGGAGAAGCAACTGGCTGGGATCT
CACCCGGACTCATAAGAATGTCCATTGGATATATGGGTACGTTCGAGCAAAAATGGAGCCAATTTGAGAAGGCTCTTGCTAAAGTGCAAGATATGGGCCTTCCATTTTGC
AACAATAACTAATTTTAGTACAACAAATGTGAGGTGTGAGAATTTGAACATTCAACTTTAAAATGA
Protein sequenceShow/hide protein sequence
MKRLANSEYGFGGMLCLDMGTEERANRLMSVLQNNTQFGFMAVSLGYYETLMSCSGSSTSSEMNGEEKQLAGISPGLIRMSIGYMGTFEQKWSQFEKALAKVQDMGLPFC
NNNUFUYNKCEVUEFEHSTLK