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MS028027 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028027
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold290:1389430..1390935
RNA-Seq ExpressionMS028027
SyntenyMS028027
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596727.1 hypothetical protein SDJN03_09907, partial [Cucurbita argyrosperma subsp. sororia]4.8e-4679.66Show/hide
Query:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--
        MESEAK+ QSLS        +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE   
Subjt:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--

Query:  -TKSFAKCAGDCSCITIA
         TKSFAKCAGDCSCIT+A
Subjt:  -TKSFAKCAGDCSCITIA

XP_022145399.1 uncharacterized protein LOC111014857 [Momordica charantia]2.7e-5799.09Show/hide
Query:  MESEAKSNQSLSAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKC
        MESEAKSNQSL AAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKC
Subjt:  MESEAKSNQSLSAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKC

Query:  AGDCSCITIA
        AGDCSCITIA
Subjt:  AGDCSCITIA

XP_022924877.1 uncharacterized protein LOC111432244 [Cucurbita moschata]4.8e-4679.66Show/hide
Query:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--
        MESEAK+ QSLS        +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE   
Subjt:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--

Query:  -TKSFAKCAGDCSCITIA
         TKSFAKCAGDCSCIT+A
Subjt:  -TKSFAKCAGDCSCITIA

XP_023540550.1 uncharacterized protein LOC111800878 isoform X1 [Cucurbita pepo subsp. pepo]2.8e-4677.24Show/hide
Query:  MESEAKSNQSLSAAG----------IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISK
        MESEAK+ QSLS+ G          +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISK
Subjt:  MESEAKSNQSLSAAG----------IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISK

Query:  IEA---TKSFAKCAGDCSCITIA
        IE    TKSFAKCAGDCSCIT+A
Subjt:  IEA---TKSFAKCAGDCSCITIA

XP_023540551.1 uncharacterized protein LOC111800878 isoform X2 [Cucurbita pepo subsp. pepo]1.4e-4577.05Show/hide
Query:  MESEAKSNQSLSAAG---------IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKI
        MESEAK+ QSLS            +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISKI
Subjt:  MESEAKSNQSLSAAG---------IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKI

Query:  EA---TKSFAKCAGDCSCITIA
        E    TKSFAKCAGDCSCIT+A
Subjt:  EA---TKSFAKCAGDCSCITIA

TrEMBL top hitse value%identityAlignment
A0A251P3A8 Uncharacterized protein2.1e-2348.36Show/hide
Query:  MESEAKSNQ---SLSAAG----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICII--EGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKI
        ME+++   Q   S++AAG    I KA+C+CGEGWKC I  T+GPDAGK F NCG+NC C+I  +GT   +V  Q++ ++     A CECGEGW C ISK+
Subjt:  MESEAKSNQ---SLSAAG----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICII--EGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKI

Query:  E---ATKSFAKCAGDCSCITIA
        E   A K F++C+  C+C+T A
Subjt:  E---ATKSFAKCAGDCSCITIA

A0A6J1CV46 uncharacterized protein LOC1110148571.3e-5799.09Show/hide
Query:  MESEAKSNQSLSAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKC
        MESEAKSNQSL AAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKC
Subjt:  MESEAKSNQSLSAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKC

Query:  AGDCSCITIA
        AGDCSCITIA
Subjt:  AGDCSCITIA

A0A6J1EA88 uncharacterized protein LOC1114322442.3e-4679.66Show/hide
Query:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--
        MESEAK+ QSLS        +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIEGTAEG VKLQQLA E   EGA+CECGEGWSCTISKIE   
Subjt:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--

Query:  -TKSFAKCAGDCSCITIA
         TKSFAKCAGDCSCIT+A
Subjt:  -TKSFAKCAGDCSCITIA

A0A6J1KZQ8 uncharacterized protein LOC1114985432.2e-4477.12Show/hide
Query:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--
        MESEAK  QSLS        +GKAYCKCGEGWKCEIK TQGPDAGKTFVNCGNNC+CIIEGTAEG VKLQQLA E   EGA+CECGEGWSC+ISKIE   
Subjt:  MESEAKSNQSLSAAG-----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEA--

Query:  -TKSFAKCAGDCSCITIA
          K FAKCAGDCSCIT+A
Subjt:  -TKSFAKCAGDCSCITIA

A0A6J5X755 Uncharacterized protein9.5e-2449.18Show/hide
Query:  MESEAKSNQ---SLSAAG----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICII--EGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKI
        ME+++   Q   S++AAG    I KA+C+CGEGWKC I  T+GPDAGK F NCG+NC C+I  +GT   +V  Q++ E+     A CECGEGW C ISK+
Subjt:  MESEAKSNQ---SLSAAG----IGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICII--EGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKI

Query:  E---ATKSFAKCAGDCSCITIA
        E   A K F++C+  C+C+T A
Subjt:  E---ATKSFAKCAGDCSCITIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTGAAGCAAAAAGCAATCAATCTCTTAGTGCGGCAGGAATTGGGAAGGCATATTGCAAATGTGGGGAAGGTTGGAAATGTGAGATCAAAATGACACAAGGCCC
TGATGCTGGCAAGACCTTTGTTAATTGTGGCAACAACTGCATCTGTATAATAGAAGGGACAGCTGAAGGGGAAGTGAAGTTGCAGCAATTGGCAGAGGAGAGCAATTTGG
AAGGGGCAACTTGTGAGTGTGGTGAAGGATGGAGCTGCACCATCTCCAAGATTGAAGCCACCAAGTCCTTTGCCAAGTGTGCTGGAGATTGTTCCTGCATCACTATTGCT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGTGAAGCAAAAAGCAATCAATCTCTTAGTGCGGCAGGAATTGGGAAGGCATATTGCAAATGTGGGGAAGGTTGGAAATGTGAGATCAAAATGACACAAGGCCC
TGATGCTGGCAAGACCTTTGTTAATTGTGGCAACAACTGCATCTGTATAATAGAAGGGACAGCTGAAGGGGAAGTGAAGTTGCAGCAATTGGCAGAGGAGAGCAATTTGG
AAGGGGCAACTTGTGAGTGTGGTGAAGGATGGAGCTGCACCATCTCCAAGATTGAAGCCACCAAGTCCTTTGCCAAGTGTGCTGGAGATTGTTCCTGCATCACTATTGCT
TGA
Protein sequenceShow/hide protein sequence
MESEAKSNQSLSAAGIGKAYCKCGEGWKCEIKMTQGPDAGKTFVNCGNNCICIIEGTAEGEVKLQQLAEESNLEGATCECGEGWSCTISKIEATKSFAKCAGDCSCITIA