; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028029 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028029
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Genome locationscaffold290:1405414..1406163
RNA-Seq ExpressionMS028029
SyntenyMS028029
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAA34064.1 glycine-rich protein-2, partial [Cucumis sativus]1.6e-3671.85Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG
        MAISK  S  FLLL+  GLASAAR+LL +D                 P     +DRR GY  DRDHHD  YGGG+GGGY  GAGAGSSLGGSGYGS  GG
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG

Query:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG
        GGGSGYGG G+H VGYGSGGGGGYG G+GS LGG+GYGSGGGGG+GGGYGD GGRGKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGSG GGGAG    
Subjt:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG

Query:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY
        +HG GYGSGGGGG+G GYGGSK GYGGGSGG  GGG GYG GGAHG GYG GGG+   G GEE GYDGGY
Subjt:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY

XP_011650342.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]7.0e-3772.22Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG
        MAISK  S  FLLL+  GLASAAR+LL +D                 P     +DRR GY  DRDHHD  YGGG+GGGY  GAGAGSSLGGSGYGS  GG
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG

Query:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG
        GGGSGYGG G+H VGYGSGGGGGYG G+GS LGG+GYGSGGGGGSGGGYGD GGRGKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGSG GGGAG    
Subjt:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG

Query:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY
        +HG GYGSGGGGG+G GYGGSK GYGGGSGG  GGG GYG GGAHG GYG GGG+   G GEE GYDGGY
Subjt:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY

XP_022145469.1 glycine-rich cell wall structural protein 1.8-like isoform X1 [Momordica charantia]1.3e-7897.21Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAYNPYDRRVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGG
        MAISKAFSL+FLLLLGFGLASAARTLLGH+PDAYNPYDRRVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGG
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAYNPYDRRVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGG

Query:  GGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHGAGYGSGGGGGSGGGYGGS
        GGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHG GYGSGGGGGSGGGYGGS
Subjt:  GGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHGAGYGSGGGGGSGGGYGGS

Query:  KGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGG--GEERGYDGGY
        KGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGG G  GEE GYDGGY
Subjt:  KGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGG--GEERGYDGGY

XP_038903617.1 glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]1.7e-3574.23Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHD----PDAYNPYDR-----RVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDH
        M I +  S   LLL+G GLASA RTLL +D       Y+ YD      +VGY+RDHHDG YGGG+ GGYG GAGSSLGGSGYGS  GGGGGSGY G GDH
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHD----PDAYNPYDR-----RVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDH

Query:  GVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHGAGYGSGGGG
        GVGYGSGGGGGYG G+GS LGG+GYGSGGGGGSGGGYGD GG GKGYGSGGGGGSGY G GDHG GYGSGGGGGYGSGGG   G G G HG GYGSGGGG
Subjt:  GVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHGAGYGSGGGG

Query:  GSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGY--GGGGGSGGGGGGEERGYDGGY
        GSGGGYGGSK GY GGSGG  GGG GYG GGAHG GY  GGG GSG GG GEE GYDGGY
Subjt:  GSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGY--GGGGGSGGGGGGEERGYDGGY

XP_038905926.1 glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]7.3e-4276.83Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHD----PDAYNPYDR-----RVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDH
        MAI +  S  FLLL+G GLASA R LL +D       Y+ YD      +VGY+RDHHDG YGGG+GGGYG GAGSSLGGSGYGS  GGGGGSGY GAGDH
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHD----PDAYNPYDR-----RVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDH

Query:  GVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG-EHGAGYGSGGG
        GVGYGSGGGGGYG G+GS LGG+GYGSGGGGGSGGGYGD GG GKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGS  GGGAGYGPG EHG GYGSGGG
Subjt:  GVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG-EHGAGYGSGGG

Query:  GGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY
        GGSG GYGGSK GYGGGSGG  GGG GYG GGAHG   GGG GSG GG GEE GYDGGY
Subjt:  GGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY

TrEMBL top hitse value%identityAlignment
A0A0A0L1U7 Uncharacterized protein3.4e-3772.22Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG
        MAISK  S  FLLL+  GLASAAR+LL +D                 P     +DRR GY  DRDHHD  YGGG+GGGY  GAGAGSSLGGSGYGS  GG
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG

Query:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG
        GGGSGYGG G+H VGYGSGGGGGYG G+GS LGG+GYGSGGGGGSGGGYGD GGRGKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGSG GGGAG    
Subjt:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG

Query:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY
        +HG GYGSGGGGG+G GYGGSK GYGGGSGG  GGG GYG GGAHG GYG GGG+   G GEE GYDGGY
Subjt:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY

A0A1S3BJM7 glycine-rich cell wall structural protein 2-like1.9e-3571.69Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAY-----NPYDR------RVGY----------DRDHHDGAYGGGSGGGYGA--GAGSSLGGSGYGSGG
        MAISK  S  FLLL+  GLASAAR+LL +D   +     N YD       +VGY          DRDHHD  YGGG+GGGYGA  GAGSSLGGSGYGS  
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAY-----NPYDR------RVGY----------DRDHHDGAYGGGSGGGYGA--GAGSSLGGSGYGSGG

Query:  GGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYG
        GGGGGSGYGG G+HGVGYGSGGGGGYG G+GS LGG+GYGSGGGGGSGGGYGD GG GKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGS G GGAG  
Subjt:  GGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYG

Query:  PGEHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY
          +HG GYGSGGGGG+GGGYGGSK GYG GSGG  GGG GYG GGAHG GYG GGG+ G G GEE GYDGGY
Subjt:  PGEHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY

A0A6J1CWP3 glycine-rich cell wall structural protein 1.8-like isoform X16.1e-7997.21Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAYNPYDRRVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGG
        MAISKAFSL+FLLLLGFGLASAARTLLGH+PDAYNPYDRRVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGG
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAYNPYDRRVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGG

Query:  GGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHGAGYGSGGGGGSGGGYGGS
        GGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHG GYGSGGGGGSGGGYGGS
Subjt:  GGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHGAGYGSGGGGGSGGGYGGS

Query:  KGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGG--GEERGYDGGY
        KGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGG G  GEE GYDGGY
Subjt:  KGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGG--GEERGYDGGY

A0A6J1KTC0 glycine-rich cell wall structural protein 1.8-like2.3e-3372.18Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAYN------PYDRRVGYDRDHHD---GAYGGGSGGGY--GAGAGSSLGGSGYGSGGGGGGGSGYGGAG
        MAISK+ SL FLLLLG GLASAARTLL +DP  ++       ++ RVGYD DHHD   GAYGGGSGGGY  GAGAGS+LGGSGYGSGGGGGGGSGY G G
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAYN------PYDRRVGYDRDHHD---GAYGGGSGGGY--GAGAGSSLGGSGYGSGGGGGGGSGYGGAG

Query:  D-HGVGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGP-GEHGAGYG
        D  G GYGSGGGGG G G G  G  G GYGSGGGGGSG GYGD  G GKGYGSGGGGGSGYGGG DHG GYGSGGGGGYG+  GGGAGYGP G+HG GYG
Subjt:  D-HGVGYGSGGGGGYGGGMGS-GLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGP-GEHGAGYG

Query:  SGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSG---GGGGGEERGYDGGY
        SGGGGGSGGGYGG   GYGGG         GYG GGA G GYG GGG+G   GG GGEE GYDGGY
Subjt:  SGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSG---GGGGGEERGYDGGY

Q9ZWM2 Glycine-rich protein-2 (Fragment)7.6e-3771.85Show/hide
Query:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG
        MAISK  S  FLLL+  GLASAAR+LL +D                 P     +DRR GY  DRDHHD  YGGG+GGGY  GAGAGSSLGGSGYGS  GG
Subjt:  MAISKAFSLAFLLLLGFGLASAARTLLGHD-----------------PDAYNPYDRRVGY--DRDHHDGAYGGGSGGGY--GAGAGSSLGGSGYGSGGGG

Query:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG
        GGGSGYGG G+H VGYGSGGGGGYG G+GS LGG+GYGSGGGGG+GGGYGD GGRGKGYGSGGGGGSGYGG GDHG GYGSGGGGGYGSG GGGAG    
Subjt:  GGGSGYGGAGDHGVGYGSGGGGGYGGGMGSGLGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG

Query:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY
        +HG GYGSGGGGG+G GYGGSK GYGGGSGG  GGG GYG GGAHG GYG GGG+   G GEE GYDGGY
Subjt:  EHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGGGGEERGYDGGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCTCTAAAGCTTTCTCCCTTGCTTTTCTTCTGCTGCTGGGTTTCGGCTTAGCTTCGGCGGCCAGAACCCTTCTCGGCCATGATCCTGATGCATATAACCCTTA
TGATCGGAGAGTAGGATATGATCGCGACCACCATGATGGTGCATATGGTGGTGGTTCTGGTGGAGGATATGGTGCCGGAGCTGGCTCTTCTCTGGGAGGTTCTGGATATG
GAAGCGGTGGCGGCGGAGGAGGTGGTTCTGGATATGGTGGTGCAGGAGATCATGGAGTTGGTTACGGGAGTGGTGGAGGTGGTGGATATGGAGGAGGGATGGGATCTGGC
CTTGGAGGCGCTGGATACGGGAGTGGCGGCGGCGGAGGAAGCGGCGGAGGATATGGAGATGCAGGTGGGCGTGGAAAAGGATACGGTAGCGGTGGTGGTGGAGGAAGTGG
ATATGGAGGCGGAGGAGACCATGGGGCTGGTTATGGTAGCGGCGGAGGTGGAGGATATGGAAGTGGAGGCGGTGGTGGTGCCGGATATGGTCCGGGAGAGCATGGTGCTG
GTTATGGAAGTGGAGGAGGAGGAGGGTCTGGTGGTGGTTATGGTGGTTCCAAAGGCGGCTACGGAGGTGGTAGCGGCGGCGGGAAAGGTGGGGGAGGAGGATACGGTGCT
GGAGGAGCGCACGGAGGCGGCTATGGAGGTGGCGGAGGATCGGGAGGTGGCGGCGGCGGTGAAGAAAGAGGATACGATGGTGGATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATCTCTAAAGCTTTCTCCCTTGCTTTTCTTCTGCTGCTGGGTTTCGGCTTAGCTTCGGCGGCCAGAACCCTTCTCGGCCATGATCCTGATGCATATAACCCTTA
TGATCGGAGAGTAGGATATGATCGCGACCACCATGATGGTGCATATGGTGGTGGTTCTGGTGGAGGATATGGTGCCGGAGCTGGCTCTTCTCTGGGAGGTTCTGGATATG
GAAGCGGTGGCGGCGGAGGAGGTGGTTCTGGATATGGTGGTGCAGGAGATCATGGAGTTGGTTACGGGAGTGGTGGAGGTGGTGGATATGGAGGAGGGATGGGATCTGGC
CTTGGAGGCGCTGGATACGGGAGTGGCGGCGGCGGAGGAAGCGGCGGAGGATATGGAGATGCAGGTGGGCGTGGAAAAGGATACGGTAGCGGTGGTGGTGGAGGAAGTGG
ATATGGAGGCGGAGGAGACCATGGGGCTGGTTATGGTAGCGGCGGAGGTGGAGGATATGGAAGTGGAGGCGGTGGTGGTGCCGGATATGGTCCGGGAGAGCATGGTGCTG
GTTATGGAAGTGGAGGAGGAGGAGGGTCTGGTGGTGGTTATGGTGGTTCCAAAGGCGGCTACGGAGGTGGTAGCGGCGGCGGGAAAGGTGGGGGAGGAGGATACGGTGCT
GGAGGAGCGCACGGAGGCGGCTATGGAGGTGGCGGAGGATCGGGAGGTGGCGGCGGCGGTGAAGAAAGAGGATACGATGGTGGATATTGA
Protein sequenceShow/hide protein sequence
MAISKAFSLAFLLLLGFGLASAARTLLGHDPDAYNPYDRRVGYDRDHHDGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGDHGVGYGSGGGGGYGGGMGSG
LGGAGYGSGGGGGSGGGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPGEHGAGYGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGA
GGAHGGGYGGGGGSGGGGGGEERGYDGGY