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MS028061 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028061
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlucan endo-1,3-beta-glucosidase
Genome locationscaffold358:62478..63390
RNA-Seq ExpressionMS028061
SyntenyMS028061
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607951.1 Glucan endo-1,3-beta-D-glucosidase, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

XP_022137818.1 glucan endo-1,3-beta-D-glucosidase [Momordica charantia]4.3e-3088.41Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN ASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

XP_022941529.1 glucan endo-1,3-beta-glucosidase-like isoform X1 [Cucurbita moschata]2.4e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

XP_022941530.1 major pollen allergen Ole e 10-like isoform X2 [Cucurbita moschata]2.4e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

XP_023525198.1 major pollen allergen Ole e 10-like isoform X1 [Cucurbita pepo subsp. pepo]3.1e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

TrEMBL top hitse value%identityAlignment
A0A6J1CBF4 glucan endo-1,3-beta-D-glucosidase2.1e-3088.41Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN ASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

A0A6J1FNL6 glucan endo-1,3-beta-glucosidase-like isoform X11.2e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

A0A6J1FTX7 major pollen allergen Ole e 10-like isoform X21.2e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

A0A6J1IYM5 major pollen allergen Ole e 10-like isoform X21.5e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

A0A6J1J1Y2 major pollen allergen Ole e 10-like isoform X11.5e-2881.16Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        ++ +A   VDCRIMQKGCPCFYPDNLIN AS+AMNLYY+S+GKNQWNCDFRGS LIVITDPSYGNC+YP
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 14.7e-1145Show/hide
Query:  DCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        +C  +Q G  C+ P+N+   AS A N YY   G+   +CDF+G A+I  TDPS+G+CI+P
Subjt:  DCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

P52409 Glucan endo-1,3-beta-glucosidase2.8e-1141.18Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY
        ++ +A   VDC+ +Q G  CF P++L   AS  MN YY + G     CDF+G+ ++  +DPSYG C Y
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY

Q8VYE5 Glucan endo-1,3-beta-glucosidase 125.5e-1235.92Show/hide
Query:  GGEWRGNSNSRRIADQSMNRIRLKTELILIFPPPCDMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGN
        GG   G +    IA    +   L+T L        D       VDC  +Q   PCF PD +++ AS A N YY   G +  +C F G+++ V  DPSYGN
Subjt:  GGEWRGNSNSRRIADQSMNRIRLKTELILIFPPPCDMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGN

Query:  CIY
        C+Y
Subjt:  CIY

Q94G86 Glucan endo-1,3-beta-D-glucosidase3.3e-1247.54Show/hide
Query:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        +DC  +Q G  CF P+ +   A+  MNLYY S G+N WNCDF  +A +  T+PSYG C +P
Subjt:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

Q9ZU91 Glucan endo-1,3-beta-glucosidase 36.1e-1140.98Show/hide
Query:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP
        VDC  + +G  C+ PD+++  ++ A N YY   GK   +CDF+G A +  TDPS G C++P
Subjt:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP

Arabidopsis top hitse value%identityAlignment
AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein2.5e-2344.9Show/hide
Query:  IADQSMNRIRLKTELILIFPPPCD-------MKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY
        +++++   +  +T+   +  P  D       + FA   VDCR++  GCPC+ P NLIN AS+AMNLYY + G+N WNC+F+ S LI IT+PSYGNC Y
Subjt:  IADQSMNRIRLKTELILIFPPPCD-------MKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY

AT2G43660.1 Carbohydrate-binding X8 domain superfamily protein4.7e-1451.67Show/hide
Query:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY
        V C ++ +G  C+ P NL N ASV MNLYY ++G+    CDF GS +I +TDPSY  CIY
Subjt:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY

AT2G43660.2 Carbohydrate-binding X8 domain superfamily protein4.7e-1451.67Show/hide
Query:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY
        V C ++ +G  C+ P NL N ASV MNLYY ++G+    CDF GS +I +TDPSY  CIY
Subjt:  VDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY

AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein1.1e-2057.35Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY
        ++ FA   +DC+I+ +G  C+ PD++I+RASVAMNLYY ++G++ WNC+F GS LI ITDPSYG+CIY
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIY

AT3G28250.1 Carbohydrate-binding X8 domain superfamily protein5.5e-1550Show/hide
Query:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS
        ++ +A  +VDC+I+     C+ PDN+ N ASV MNLYY + G+N WNC+F  S L+ ITDPS
Subjt:  DMKFAEDVVDCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGCGTCCTTTGAGCTTCCTTCAATCTCTTCGCTTTCCCCGTTACCATGGACACCCGACGATTTTCCTGCTATAAATCCTCCTCCATCCTCTGATTTTGGCGATCA
CCAAATCCTCCGCCCTCGATTTCACGGATCTGTAGCTCTTTCTTCGATTTCAGATCTGGTTGTTGCAGAAATCAGGAGGAGATTTGCTGGCGGTGAATGGAGAGGTAATT
CTAATTCTCGTCGAATTGCAGATCAGAGCATGAACAGAATTAGGTTGAAAACTGAATTGATTTTAATTTTTCCCCCTCCGTGCGATATGAAATTTGCAGAAGACGTGGTG
GATTGCAGGATAATGCAGAAGGGATGCCCCTGCTTTTATCCTGATAATCTGATCAACCGCGCCTCCGTAGCCATGAATCTCTATTATCATTCCAGAGGGAAGAATCAGTG
GAACTGTGATTTCAGAGGCTCTGCTCTCATTGTCATCACTGATCCAAGTTATGGAAACTGCATTTACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGCGTCCTTTGAGCTTCCTTCAATCTCTTCGCTTTCCCCGTTACCATGGACACCCGACGATTTTCCTGCTATAAATCCTCCTCCATCCTCTGATTTTGGCGATCA
CCAAATCCTCCGCCCTCGATTTCACGGATCTGTAGCTCTTTCTTCGATTTCAGATCTGGTTGTTGCAGAAATCAGGAGGAGATTTGCTGGCGGTGAATGGAGAGGTAATT
CTAATTCTCGTCGAATTGCAGATCAGAGCATGAACAGAATTAGGTTGAAAACTGAATTGATTTTAATTTTTCCCCCTCCGTGCGATATGAAATTTGCAGAAGACGTGGTG
GATTGCAGGATAATGCAGAAGGGATGCCCCTGCTTTTATCCTGATAATCTGATCAACCGCGCCTCCGTAGCCATGAATCTCTATTATCATTCCAGAGGGAAGAATCAGTG
GAACTGTGATTTCAGAGGCTCTGCTCTCATTGTCATCACTGATCCAAGTTATGGAAACTGCATTTACCCTTGA
Protein sequenceShow/hide protein sequence
MCASFELPSISSLSPLPWTPDDFPAINPPPSSDFGDHQILRPRFHGSVALSSISDLVVAEIRRRFAGGEWRGNSNSRRIADQSMNRIRLKTELILIFPPPCDMKFAEDVV
DCRIMQKGCPCFYPDNLINRASVAMNLYYHSRGKNQWNCDFRGSALIVITDPSYGNCIYP