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MS028111 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028111
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description(1->3)-beta-glucan endohydrolase
Genome locationscaffold208:393344..393664
RNA-Seq ExpressionMS028111
SyntenyMS028111
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
InterPro domainsIPR000490 - Glycoside hydrolase family 17
IPR017853 - Glycoside hydrolase superfamily
IPR044965 - Glycoside hydrolase family 17, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135630.1 probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia]3.4e-3377.14Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        MS  GVSYPP   AFT AAA PLS IAKVVG+SG PLLLNVYPYF Y SN QQIPLNY LFTSTT  VV GNLNYYNLFD MVDSFY  LEKIGA  VRL
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

XP_022141986.1 probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia]3.5e-3073.33Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        MSA GVSYPP A  FT  A  PLSNIAKVVG+SG PLLLNVYPYF Y SN QQI LNY LFTSTT  +V GNL+YYNLFD MVDSFY  LEKIGA +V L
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

XP_022152302.1 probable glucan endo-1,3-beta-glucosidase BG4 [Momordica charantia]3.1e-3477.14Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M A GVSYPP A  FT+AAA PLS+IAKVVG+SG PLLLNVYPYF Y S+ QQIPLNY LFTSTT GVV GNLNYYNLFD MVDSFY  LEKI AA+VRL
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

XP_022152305.1 ribosomal protein S6 kinase alpha-5-like [Momordica charantia]4.6e-4694.34Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        +SATGVSYPPFA AFTIAAARPLSNIAKVVGASGVPLLLNVYPYF YTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFY VLEKI AA+VRL
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKTR
        YISKTR
Subjt:  YISKTR

XP_023536560.1 probable glucan endo-1,3-beta-glucosidase BG4 [Cucurbita pepo subsp. pepo]2.4e-2664.76Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M+   VSYPP A AF+  A  PL +I +V+G SG PLLLNVYPYF Y SN QQI L+Y LFTSTT  VV GNL Y+NLFD MVDSFY  LEKIGA  VR+
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

TrEMBL top hitse value%identityAlignment
A0A0A0L3A5 (1->3)-beta-glucan endohydrolase1.5e-2663.81Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M+A GVSYPP A AFT +AA  + +IA V+G+SG P+L+NVYPYF Y SN QQI LNY LFTS+T  VV GNL Y+NLFD MVDSFY  LEKI A  +R+
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

A0A6J1C1J7 (1->3)-beta-glucan endohydrolase1.7e-3377.14Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        MS  GVSYPP   AFT AAA PLS IAKVVG+SG PLLLNVYPYF Y SN QQIPLNY LFTSTT  VV GNLNYYNLFD MVDSFY  LEKIGA  VRL
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

A0A6J1CKU8 (1->3)-beta-glucan endohydrolase1.7e-3073.33Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        MSA GVSYPP A  FT  A  PLSNIAKVVG+SG PLLLNVYPYF Y SN QQI LNY LFTSTT  +V GNL+YYNLFD MVDSFY  LEKIGA +V L
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

A0A6J1DDK5 (1->3)-beta-glucan endohydrolase2.2e-4694.34Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        +SATGVSYPPFA AFTIAAARPLSNIAKVVGASGVPLLLNVYPYF YTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFY VLEKI AA+VRL
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKTR
        YISKTR
Subjt:  YISKTR

A0A6J1DFU0 (1->3)-beta-glucan endohydrolase1.5e-3477.14Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M A GVSYPP A  FT+AAA PLS+IAKVVG+SG PLLLNVYPYF Y S+ QQIPLNY LFTSTT GVV GNLNYYNLFD MVDSFY  LEKI AA+VRL
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         IS+T
Subjt:  YISKT

SwissProt top hitse value%identityAlignment
A7PQW3 Glucan endo-1,3-beta-glucosidase4.8e-1438.61Show/hide
Query:  GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISK
        G SYPP   +F+   +  ++ I   +  +G PLL N+YPYF YT + Q I L+Y LFT++   V  G+  Y NLFD ++D+ Y  LEK G +++++ +S+
Subjt:  GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISK

Query:  T
        +
Subjt:  T

O22317 Glucan endo-1,3-beta-glucosidase5.5e-1847.52Show/hide
Query:  GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISK
        G SYPP A AF+ AA   LS I + + ++G PLL+NVYPYF YT N  QI L Y LFT++   V  G  +Y NLFD +VD+ +  LE++G A+V + +S+
Subjt:  GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISK

Query:  T
        +
Subjt:  T

P23431 Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform7.0e-1341.9Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M+  G SYPP   +F   A   +  I   +  +  PLL+N+YPYF Y+ N  QI L Y+LFT+    V  G+  Y NLFD M+DS Y  LE+ G ASV +
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         +S++
Subjt:  YISKT

P23546 Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB507.0e-1341.9Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M+  G SYPP   +F   A   +  I   +  +  PLL+N+YPYF Y+ N  QI L Y+LFT+    V  G+  Y NLFD M+DS Y  LE+ G ASV +
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         +S++
Subjt:  YISKT

P52408 Glucan endo-1,3-beta-glucosidase, basic isoform1.8e-1341.58Show/hide
Query:  GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISK
        G ++PP   +F       L  I + + +   PLL+N+YPYF Y+ N Q I L+Y LFT+ +  V  GN  Y NLFD M+D  Y  LEK G  S+++ IS+
Subjt:  GVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISK

Query:  T
        T
Subjt:  T

Arabidopsis top hitse value%identityAlignment
AT1G33220.1 Glycosyl hydrolase superfamily protein3.8e-1438.1Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        MS    SYPP A  FT  A   L  + K++  +  P+L+N+YPYF Y S+   IPL+Y  F +  + V  G L Y N+FD + D+F   +EK G   + +
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         +S+T
Subjt:  YISKT

AT1G77780.1 Glycosyl hydrolase superfamily protein2.6e-1538.46Show/hide
Query:  SATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLY
        +A   SYPP A  F  A    ++ I  ++ ++  PL++NVYPYF Y S+   + L Y  F ST+  V  G   Y N+FD  +D+F   LEKI   SV++Y
Subjt:  SATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLY

Query:  ISKT
        +++T
Subjt:  ISKT

AT1G77790.1 Glycosyl hydrolase superfamily protein7.6e-1539.05Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M+A   +YPP A  F       ++ I  ++  +  PL+ N+YPYF Y S+   I L+Y  F S T  V+ G+L Y N+F+ MVD F   LEKI AA+V +
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         +++T
Subjt:  YISKT

AT5G20330.1 beta-1,3-glucanase 41.9e-1337.14Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        MS    SYPP A  FT  A   L  + K++  +  P+L+N+YPYF Y S+   I L+Y  F + +  V  G+L Y N+FD + D+F   +EK G  ++ +
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         +S+T
Subjt:  YISKT

AT5G20390.1 Glycosyl hydrolase superfamily protein9.3e-1335.24Show/hide
Query:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL
        M+  G SYPP A  F   A   L+ + K +  +  P+L+N+YPYF Y ++   I L+Y +F +    V  G L Y N+FDV+ D+F   +EK G   + +
Subjt:  MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRL

Query:  YISKT
         +++T
Subjt:  YISKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCCACGGGAGTCTCGTACCCTCCCTTCGCTAGAGCATTCACCATCGCAGCTGCCAGACCTCTGAGCAACATCGCAAAGGTGGTGGGCGCTAGTGGTGTACCATT
ATTGCTGAACGTGTACCCATATTTCGTGTACACATCAAACCTACAACAAATCCCACTAAATTACACCCTCTTCACTTCCACGACGTCGGGAGTGGTGTATGGAAATCTGA
ACTACTATAATCTGTTTGATGTCATGGTGGATTCTTTCTATGAGGTGCTGGAGAAGATTGGTGCTGCCAGTGTGAGACTATACATTTCAAAGACTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCCACGGGAGTCTCGTACCCTCCCTTCGCTAGAGCATTCACCATCGCAGCTGCCAGACCTCTGAGCAACATCGCAAAGGTGGTGGGCGCTAGTGGTGTACCATT
ATTGCTGAACGTGTACCCATATTTCGTGTACACATCAAACCTACAACAAATCCCACTAAATTACACCCTCTTCACTTCCACGACGTCGGGAGTGGTGTATGGAAATCTGA
ACTACTATAATCTGTTTGATGTCATGGTGGATTCTTTCTATGAGGTGCTGGAGAAGATTGGTGCTGCCAGTGTGAGACTATACATTTCAAAGACTAGGTGA
Protein sequenceShow/hide protein sequence
MSATGVSYPPFARAFTIAAARPLSNIAKVVGASGVPLLLNVYPYFVYTSNLQQIPLNYTLFTSTTSGVVYGNLNYYNLFDVMVDSFYEVLEKIGAASVRLYISKTR