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MS028179 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028179
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhospholipid scramblase
Genome locationscaffold348:147031..147342
RNA-Seq ExpressionMS028179
SyntenyMS028179
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3438596.1 hypothetical protein FNV43_RR21359 [Rhamnella rubrinervis]1.7e-1348.6Show/hide
Query:  MERK--ISSSAPVSATWGRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL--AYS
        MERK  +   A V +  GRP +            RNPN  CCD   E LCSAC+ C+CCPL +VW C+++P    WRAAK AK W    S EK +  AYS
Subjt:  MERK--ISSSAPVSATWGRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL--AYS

Query:  SFSDIDS
        SFSDIDS
Subjt:  SFSDIDS

KAG6672932.1 hypothetical protein I3842_16G083700 [Carya illinoinensis]6.5e-1358.33Show/hide
Query:  RNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS
        R+ + +CCD   E LCSAC+ CVCCPLA+VWGC++LP    W AAK+AK W   GS+ +  A YSSFSDIDS
Subjt:  RNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS

XP_023927456.1 uncharacterized protein LOC112038835 isoform X1 [Quercus suber]1.2e-1162.69Show/hide
Query:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS
        +CCD   E LCSAC+ CVCCPLA+VWGC +LP    WRAAK AK+W   GS  K  A YSSFSD DS
Subjt:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS

XP_030949871.1 uncharacterized protein LOC115973770 [Quercus lobata]4.2e-1264.18Show/hide
Query:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS
        +CCD   E LCSAC+ CVCCPLA+VWGC +LP    WRAAK AKKW   GS  K  A YSSFSD DS
Subjt:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS

XP_042964072.1 uncharacterized protein LOC122298409 [Carya illinoinensis]6.5e-1358.33Show/hide
Query:  RNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS
        R+ + +CCD   E LCSAC+ CVCCPLA+VWGC++LP    W AAK+AK W   GS+ +  A YSSFSDIDS
Subjt:  RNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS

TrEMBL top hitse value%identityAlignment
A0A2N9I0D5 Uncharacterized protein9.2e-1354.88Show/hide
Query:  SIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDSS
        S   S   +     KCCD   E LCSACV CVCCP+A++WGC++LP    WRAAK AK+W   GSE K  A YSSFSD D S
Subjt:  SIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDSS

A0A2P5AQX8 Uncharacterized protein3.3e-1047.12Show/hide
Query:  ERK--ISSSAPVSATWGRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL-AYSSF
        ERK  I     V    GRP  ++   P+S +P  +    CC  A E LCSAC+ CVCCPLA++W C++LP    W+AAKQA      GSE++ + AYSSF
Subjt:  ERK--ISSSAPVSATWGRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL-AYSSF

Query:  SDID
        SDID
Subjt:  SDID

A0A2P5FVU0 Uncharacterized protein7.3e-1049.44Show/hide
Query:  GRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL-AYSSFSDIDS
        GRP  ++    +S +P  +    CC  A E LCSAC+ CVCCPLA++W C++LP    W+AAKQA      GSE + + AYSSFSDIDS
Subjt:  GRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL-AYSSFSDIDS

A0A6A1VIT7 Uncharacterized protein7.8e-1262.69Show/hide
Query:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL-AYSSFSDIDS
        KCC    E LCSAC+ CVCCPL++VW C+RLP    WRAAK AK+WV  GSE +   AYSSFSD DS
Subjt:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPL-AYSSFSDIDS

A0A7N2MNY9 Uncharacterized protein2.0e-1264.18Show/hide
Query:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS
        +CCD   E LCSAC+ CVCCPLA+VWGC +LP    WRAAK AKKW   GS  K  A YSSFSD DS
Subjt:  KCCDGAPEGLCSACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGSEEKPLA-YSSFSDIDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48745.1 unknown protein4.5e-0442.86Show/hide
Query:  SACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGS------EEKPLA--YSSFSDIDS
        + C  CV CPL ++W C++ P    WRA   AK+ + G S        + LA  YSSFSDIDS
Subjt:  SACVCCVCCPLALVWGCLRLP----WRAAKQAKKWVGGGS------EEKPLA--YSSFSDIDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGAAAATCTCGTCGTCGGCGCCGGTGTCCGCAACTTGGGGGAGACCGGCGGCGGCCCAATACTCCATTCCGGCGTCTGGGGCGCCTGCGAGAAACCCCAACTT
CAAGTGCTGCGATGGGGCGCCTGAGGGGCTTTGCAGCGCATGCGTGTGCTGCGTGTGCTGCCCACTGGCTCTGGTGTGGGGATGCCTCAGGCTGCCATGGAGGGCCGCGA
AGCAAGCCAAGAAATGGGTCGGCGGCGGATCTGAAGAGAAGCCGTTGGCGTATTCTTCCTTTTCTGACATTGATTCCAGCGGTGAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGAAAATCTCGTCGTCGGCGCCGGTGTCCGCAACTTGGGGGAGACCGGCGGCGGCCCAATACTCCATTCCGGCGTCTGGGGCGCCTGCGAGAAACCCCAACTT
CAAGTGCTGCGATGGGGCGCCTGAGGGGCTTTGCAGCGCATGCGTGTGCTGCGTGTGCTGCCCACTGGCTCTGGTGTGGGGATGCCTCAGGCTGCCATGGAGGGCCGCGA
AGCAAGCCAAGAAATGGGTCGGCGGCGGATCTGAAGAGAAGCCGTTGGCGTATTCTTCCTTTTCTGACATTGATTCCAGCGGTGAAGTTTAG
Protein sequenceShow/hide protein sequence
MERKISSSAPVSATWGRPAAAQYSIPASGAPARNPNFKCCDGAPEGLCSACVCCVCCPLALVWGCLRLPWRAAKQAKKWVGGGSEEKPLAYSSFSDIDSSGEV