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MS028234 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028234
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionorgan-specific protein P4-like
Genome locationscaffold47:507431..510019
RNA-Seq ExpressionMS028234
SyntenyMS028234
Gene Ontology termsNA
InterPro domainsIPR024489 - Organ specific protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136081.1 organ-specific protein P4-like [Momordica charantia]1.2e-3481.19Show/hide
Query:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-HSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESG--RNEKPFAEDFEPRSNLSIYN
        FAS IESR EPGD+Q RN+I+DE+L EAIK LL  HSEK MDCNETLKP DEK FVKDIEPRPQA+FYPNDIKTKESG   NEKPFAEDFEPR NLSIYN
Subjt:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-HSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESG--RNEKPFAEDFEPRSNLSIYN

Query:  N
        N
Subjt:  N

XP_022136084.1 uncharacterized protein LOC111007863 [Momordica charantia]3.5e-4798.98Show/hide
Query:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSIYNN
        FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKP DEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSIYNN
Subjt:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSIYNN

XP_022952153.1 organ-specific protein S2-like isoform X3 [Cucurbita moschata]8.1e-1248.54Show/hide
Query:  ASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNM--------DCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNL
        A+ IESR EPGD   RN I ++ L E I+  + HS+ N         DC ETLK  D KLFVK++EPRPQATF  + +KT       K F++D EPR NL
Subjt:  ASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNM--------DCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNL

Query:  SIY
        S Y
Subjt:  SIY

XP_038888400.1 uncharacterized protein LOC120078247 [Benincasa hispida]2.1e-1248.51Show/hide
Query:  FASRIESRPEPGDQQGRNLIKDEALLEAI-----KGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSI
        FA+ IES  E GD+  RNLI D++  E I       LLS ++ + DC +TLK  D KLFV++I+PRP ATFYPNDIKTK+       F +D EPR + + 
Subjt:  FASRIESRPEPGDQQGRNLIKDEALLEAI-----KGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSI

Query:  Y
        Y
Subjt:  Y

XP_038888700.1 uncharacterized protein LOC120078501 [Benincasa hispida]8.1e-1250.52Show/hide
Query:  FASRIESRPEPGDQQGRNLIKDEALLEAI----KGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNL
        FA+ IESR EPGD   RNLIKDEA+ + I    K LLS ++++ DC +TLK GD KLFV++IEP+  A+ Y  D +T       K F ED EPRS++
Subjt:  FASRIESRPEPGDQQGRNLIKDEALLEAI----KGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNL

TrEMBL top hitse value%identityAlignment
A0A2P5EH75 Organ specific protein1.1e-1139.29Show/hide
Query:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-------HSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNE-------KPFAED
        FAS IESR +P  +  RN++KDE + EAI+GL+S        S++  +C+E+ K   + +F ++ EP P  + YP+D   + +  N+       KP+AED
Subjt:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-------HSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNE-------KPFAED

Query:  FEPRSNLSIYNN
        FEPR N+S YN+
Subjt:  FEPRSNLSIYNN

A0A6J1C2I2 organ-specific protein P4-like5.6e-3581.19Show/hide
Query:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-HSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESG--RNEKPFAEDFEPRSNLSIYN
        FAS IESR EPGD+Q RN+I+DE+L EAIK LL  HSEK MDCNETLKP DEK FVKDIEPRPQA+FYPNDIKTKESG   NEKPFAEDFEPR NLSIYN
Subjt:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLS-HSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESG--RNEKPFAEDFEPRSNLSIYN

Query:  N
        N
Subjt:  N

A0A6J1C3A3 uncharacterized protein LOC1110078631.7e-4798.98Show/hide
Query:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSIYNN
        FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKP DEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSIYNN
Subjt:  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNLSIYNN

A0A6J1GJQ3 organ-specific protein S2-like isoform X33.9e-1248.54Show/hide
Query:  ASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNM--------DCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNL
        A+ IESR EPGD   RN I ++ L E I+  + HS+ N         DC ETLK  D KLFVK++EPRPQATF  + +KT       K F++D EPR NL
Subjt:  ASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNM--------DCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSNL

Query:  SIY
        S Y
Subjt:  SIY

A0A6J1GKY7 uncharacterized protein LOC111454914 isoform X11.1e-1146.15Show/hide
Query:  ASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSH------SEKNM-DCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKP------------
        A+ IESR EPGD   RN I D++L E I   +        SEK M DC  TLK  D KLFVK++EPRPQATF  + +KTK    + KP            
Subjt:  ASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSH------SEKNM-DCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKP------------

Query:  ---FAEDFEPRSNLSIY
            AED EPR NLS Y
Subjt:  ---FAEDFEPRSNLSIY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATACAACTTTCACCAAATGAACTCAAGTAGGGACATAATGAACTCCGAGTTTGCAAGTAGAATAGAATCAAGACCCGAGCCAGGAGATCAGCAAGGGAGAAATCT
GATCAAAGACGAGGCATTGCTCGAAGCAATTAAAGGTCTTCTTAGTCATTCTGAGAAGAACATGGATTGTAATGAAACTTTGAAGCCTGGAGATGAAAAGCTTTTCGTTA
AGGATATCGAGCCTCGACCGCAAGCCACGTTTTATCCAAACGACATCAAAACAAAAGAGTCTGGCAGAAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGATCTAAT
CTGTCTATCTACAACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATACAACTTTCACCAAATGAACTCAAGTAGGGACATAATGAACTCCGAGTTTGCAAGTAGAATAGAATCAAGACCCGAGCCAGGAGATCAGCAAGGGAGAAATCT
GATCAAAGACGAGGCATTGCTCGAAGCAATTAAAGGTCTTCTTAGTCATTCTGAGAAGAACATGGATTGTAATGAAACTTTGAAGCCTGGAGATGAAAAGCTTTTCGTTA
AGGATATCGAGCCTCGACCGCAAGCCACGTTTTATCCAAACGACATCAAAACAAAAGAGTCTGGCAGAAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGATCTAAT
CTGTCTATCTACAACAACTAA
Protein sequenceShow/hide protein sequence
MEYNFHQMNSSRDIMNSEFASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKPGDEKLFVKDIEPRPQATFYPNDIKTKESGRNEKPFAEDFEPRSN
LSIYNN