; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028244 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028244
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationscaffold47:1068879..1069163
RNA-Seq ExpressionMS028244
SyntenyMS028244
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572079.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]6.7e-4186.87Show/hide
Query:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        M I KPAALKHI+KRCSSLGRKQ+A      YD VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

KAG6588978.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4087.13Show/hide
Query:  MAIRKP----AALKHILKRCSSLGRKQEAP---YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL
        MAIRKP    AALK I+KRCSSLGRKQEA    +DDVPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAAL
Subjt:  MAIRKP----AALKHILKRCSSLGRKQEAP---YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL

Query:  K
        K
Subjt:  K

KAG7011743.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-4186.87Show/hide
Query:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        M I KPAALKHI+KRCSSLGRKQ+A      YD VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

XP_022952665.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]6.7e-4186.87Show/hide
Query:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        M I KPAALKHI+KRCSSLGRKQ+A      YD VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

XP_022969389.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]1.5e-4085.86Show/hide
Query:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        M I KPAALKHI+KRCSSLGRKQ+A      YD VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

TrEMBL top hitse value%identityAlignment
A0A0A0K5S8 Uncharacterized protein1.5e-3882.83Show/hide
Query:  MAIRKPAALKHILKRCSSLGRKQE-----APYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        MAI KP ALK I+KRCSSLGRKQ+       YD VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEE+VFRSLTAALK
Subjt:  MAIRKPAALKHILKRCSSLGRKQE-----APYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

A0A6J1EKI0 auxin-responsive protein SAUR50-like2.1e-4086.14Show/hide
Query:  MAIRKP----AALKHILKRCSSLGRKQEAP---YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL
        MAIRKP    AALK I+KRCSSLGRKQEA    +DDVPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAAL
Subjt:  MAIRKP----AALKHILKRCSSLGRKQEAP---YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL

Query:  K
        +
Subjt:  K

A0A6J1GME7 auxin-responsive protein SAUR50-like3.3e-4186.87Show/hide
Query:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        M I KPAALKHI+KRCSSLGRKQ+A      YD VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

A0A6J1I2G2 auxin-responsive protein SAUR50-like7.3e-4185.86Show/hide
Query:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        M I KPAALKHI+KRCSSLGRKQ+A      YD VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSLTAALK
Subjt:  MAIRKPAALKHILKRCSSLGRKQEA-----PYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

A0A6J1JNJ6 auxin-responsive protein SAUR50-like2.8e-4083.02Show/hide
Query:  MAIRKP----AALKHILKRCSSLGRKQEAP--------YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRS
        MAIRKP    AALK I+KRCSSLGRKQEA         +DDVPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRS
Subjt:  MAIRKP----AALKHILKRCSSLGRKQEAP--------YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRS

Query:  LTAALK
        LTAALK
Subjt:  LTAALK

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR505.0e-3165.31Show/hide
Query:  IRKPAALKHILKRCSSLGRKQEAPYD------DVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        + + A LK ILKRCSSLG+K    YD      DVPKGHF VYVGENRSR++VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+ELVF++LT+ ++
Subjt:  IRKPAALKHILKRCSSLGRKQEAPYD------DVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

P0DKL1 Auxin-responsive protein SAUR503.3e-2257.83Show/hide
Query:  ALKHILKRCSSLGRKQE--APYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRS
        A+K I+K+CSS G+  +     +DVPKGHF VYVGE R+R++VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+E+ F S
Subjt:  ALKHILKRCSSLGRKQE--APYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRS

P33081 Auxin-induced protein 15A3.9e-1553.33Show/hide
Query:  GRKQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSLTAAL
        G ++ +   D PKG+ AVYVGE   R V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T+ L
Subjt:  GRKQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSLTAAL

P33083 Auxin-induced protein 6B6.6e-1548.78Show/hide
Query:  LKRCSSLGRKQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEELVFRSLTAAL
        +++ S    +  +   DV KG+ AVYVGE   R V+P+S L  P FQ LL  AEEEFG+HH + GLTIPC E VF+ +T+ L
Subjt:  LKRCSSLGRKQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEELVFRSLTAAL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 109.2e-2557.14Show/hide
Query:  AALKHILKRCSSLGR----------KQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        A++K I+KRCSSL +          +++    DVPKGHF VYVG NRSR++VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+E+ FRSL +  +
Subjt:  AALKHILKRCSSLGR----------KQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family1.2e-3064Show/hide
Query:  IRKPAALKHILKRCSSLGRKQEAPYDD--------VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        + + A +K ILKRCSSLG+KQ   Y +        VPKGHF VYVGENR R+VVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEE+VFRSLT+ L+
Subjt:  IRKPAALKHILKRCSSLGRKQEAPYDD--------VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

AT2G16580.1 SAUR-like auxin-responsive protein family8.2e-2961Show/hide
Query:  IRKPAALKHILKRCSSLGRKQ--------EAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        + + A L+ ILKRCSSLG+K         + P  DVPKGHF VYVG NRSR++VPIS LT+ DFQCLLR AEEEFGF H MGLTIPC+EL F+ LT+ ++
Subjt:  IRKPAALKHILKRCSSLGRKQ--------EAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

AT2G21220.1 SAUR-like auxin-responsive protein family1.3e-2965.26Show/hide
Query:  IRKPAALKHILKRCSSLGRKQEAPYD----DVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL
        + + A LK ILKRCSSL + Q    D    DVPKGHF VYVGE RSR++VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEE+VFRSLT+ +
Subjt:  IRKPAALKHILKRCSSLGRKQEAPYD----DVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAAL

AT4G34760.1 SAUR-like auxin-responsive protein family3.6e-3265.31Show/hide
Query:  IRKPAALKHILKRCSSLGRKQEAPYD------DVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        + + A LK ILKRCSSLG+K    YD      DVPKGHF VYVGENRSR++VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+ELVF++LT+ ++
Subjt:  IRKPAALKHILKRCSSLGRKQEAPYD------DVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

AT4G36110.1 SAUR-like auxin-responsive protein family2.0e-3064.21Show/hide
Query:  AIRKPAALKHILKRCSSLGRKQEAP--YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK
        A+ + A+LK ILKRCSSLG+K +    ++DVPKGHF VYVG++RSR+VVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+E+VFRSL +  +
Subjt:  AIRKPAALKHILKRCSSLGRKQEAP--YDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCAGAAAACCCGCCGCTCTGAAGCACATTCTGAAGCGCTGCTCCAGCCTCGGCCGGAAGCAGGAGGCGCCGTACGACGACGTTCCGAAGGGGCACTTCGCCGT
CTACGTCGGGGAGAATCGGAGCCGACATGTCGTACCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACC
ACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCAGAAAACCCGCCGCTCTGAAGCACATTCTGAAGCGCTGCTCCAGCCTCGGCCGGAAGCAGGAGGCGCCGTACGACGACGTTCCGAAGGGGCACTTCGCCGT
CTACGTCGGGGAGAATCGGAGCCGACATGTCGTACCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACC
ACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAATGA
Protein sequenceShow/hide protein sequence
MAIRKPAALKHILKRCSSLGRKQEAPYDDVPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK