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MS028246 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028246
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold47:1084745..1085029
RNA-Seq ExpressionMS028246
SyntenyMS028246
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012084411.1 auxin-responsive protein SAUR23 [Jatropha curcas]4.4e-2464.37Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSLPK
        KQILRR A+ A SS  S+N+P+G++ VY+GE++KKRY+VPISYLNEP FQ LL KAEEE+ FDHP GGLT+PC E+ F D+ SSL +
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSLPK

XP_035540332.1 auxin-responsive protein SAUR21-like [Juglans regia]4.4e-2461.8Show/hide
Query:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        MHVKQ+LRR V S+  ++S + N+P+GY  VYVGE+QKKR+++PISYLNEP FQKLL KAEEEF FDHP G LT+PC E +F +  S +
Subjt:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

XP_038887252.1 indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]4.8e-3177.53Show/hide
Query:  MHVKQILRRVASNA-GSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        MHVKQI RRVA N+  SSSV NNIPRGYIPVYVGEEQKKRY+VPISYLNEP FQ+LL KAEEEF +DHP GGLT+PC + +FTDL S L
Subjt:  MHVKQILRRVASNA-GSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

XP_041010955.1 auxin-responsive protein SAUR21-like [Juglans microcarpa x Juglans regia]4.4e-2461.8Show/hide
Query:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        MHVKQ+LRR V S+  ++S + N+P+GY  VYVGE+QKKR+++PISYLNEP FQKLL KAEEEF FDHP G LT+PC E +F +  S +
Subjt:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

XP_042981537.1 auxin-responsive protein SAUR21-like [Carya illinoinensis]4.4e-2462.92Show/hide
Query:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        MHVKQ+LRR V S+  ++S + N+P+GY  VYVGE+QKKR+I+PISYLNEP FQKLL KAEEEF FDHP G LT+PC E +F +  S +
Subjt:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

TrEMBL top hitse value%identityAlignment
A0A067JXR9 Uncharacterized protein2.1e-2464.37Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSLPK
        KQILRR A+ A SS  S+N+P+G++ VY+GE++KKRY+VPISYLNEP FQ LL KAEEE+ FDHP GGLT+PC E+ F D+ SSL +
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSLPK

A0A2I4E7C9 auxin-responsive protein SAUR21-like2.1e-2461.8Show/hide
Query:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        MHVKQ+LRR V S+  ++S + N+P+GY  VYVGE+QKKR+++PISYLNEP FQKLL KAEEEF FDHP G LT+PC E +F +  S +
Subjt:  MHVKQILRR-VASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

A0A2N9FY70 Uncharacterized protein8.1e-2462.5Show/hide
Query:  MHVKQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        MH K ILRR  SN+    VS  +P+GYI VYVGE +K+R+++PIS+LN+P FQ+LL KAEEEF FDHP GGLT+PC+E+IF +L SSL
Subjt:  MHVKQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

A0A2U1KI38 Uncharacterized protein8.1e-2463.64Show/hide
Query:  MHVKQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        +H KQ+LRR  SN G S+ S +IP+GY  VYVGEE+KKR++VP+S L++P FQ+LL +AEEEF +DHP GGLT+PCSE+IF+DLA SL
Subjt:  MHVKQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

A0A2U1KQ19 Uncharacterized protein8.1e-2463.64Show/hide
Query:  MHVKQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        +H KQ+LRR  SN G S+ S +IP+GY  VYVGEE+KKR++VP+S L++P FQ+LL +AEEEF +DHP GGLT+PCSE+IF+DLA SL
Subjt:  MHVKQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

SwissProt top hitse value%identityAlignment
Q41220 Auxin-responsive protein SAUR151.1e-2054.02Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGE--EQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        KQI+RR +S+          PRG++ VYVGE  ++KKRY+VP+SYLN+PLFQ+LL K+EEEF +DHP GGLT+PC E++F  + S +
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGE--EQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

Q9FJF6 Auxin-responsive protein SAUR231.4e-2055.29Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        K+IL R A+   +       P+G++ VYVGE QKKRY+VP+SYLN+P FQ LL K+EEEF FDHP GGLT+PC E+ F ++ S L
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

Q9FJF9 Auxin-responsive protein SAUR212.3e-2058.9Show/hide
Query:  SSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        S S ++  P+G++ VYVGE QKKRY+VP+SYL++P FQ LL K+EEEF FDHP GGLT+PC E+ F ++ S L
Subjt:  SSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

Q9FJG0 Auxin-responsive protein SAUR208.1e-2156.63Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLAS
        K+IL R      S++ ++  P+G++ VYVGE QKKRY+VPISYLN+P FQ LL K+EEEF FDHP GGLT+PC E+ F ++ S
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLAS

Q9FK62 Auxin-responsive protein SAUR242.1e-2157.65Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        K+IL R ++ AGS++     P+G++ VYVGE QKKRY+VP+SYLN+P FQ LL K+EEEF FDHP GGLT+PC E+ F ++ S L
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.4e-2256.32Show/hide
Query:  VKQILRRVASNAGSSSVSNNIPRGYIPVYVGE-EQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        V Q  +++  +   SS +  IP+G++ VYVGE  QK+R++VP++YL+ P FQKLL KAEEEF FDHP GGLT+PC+E IF DLAS L
Subjt:  VKQILRRVASNAGSSSVSNNIPRGYIPVYVGE-EQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

AT4G34770.1 SAUR-like auxin-responsive protein family1.5e-2256.98Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEE-QKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        + +  R+AS   +S  +NN+P+G++ VYVGE   +KR+++PISYLN PLFQ LL+ AEEEF FDHP GGLT+PC+E+ FT LAS L
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEE-QKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL

AT4G38840.1 SAUR-like auxin-responsive protein family3.2e-2563.1Show/hide
Query:  KQILRRV-ASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLAS
        KQILR+    ++ SSS S ++P+GY+ VYVGE+  KR++VP+SYL++P FQ LL KAEEEF FDHP GGLT+PCSE IF DLAS
Subjt:  KQILRRV-ASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLAS

AT5G18020.1 SAUR-like auxin-responsive protein family5.7e-2256.63Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLAS
        K+IL R      S++ ++  P+G++ VYVGE QKKRY+VPISYLN+P FQ LL K+EEEF FDHP GGLT+PC E+ F ++ S
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLAS

AT5G18080.1 SAUR-like auxin-responsive protein family1.5e-2257.65Show/hide
Query:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL
        K+IL R ++ AGS++     P+G++ VYVGE QKKRY+VP+SYLN+P FQ LL K+EEEF FDHP GGLT+PC E+ F ++ S L
Subjt:  KQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGTCAAGCAGATTCTTCGTCGAGTAGCTTCAAATGCAGGATCTTCTTCAGTATCCAACAACATTCCAAGAGGGTACATCCCAGTCTATGTTGGAGAGGAGCAAAA
GAAGCGATATATAGTACCGATATCTTACTTGAATGAGCCATTGTTCCAAAAGTTGCTCGATAAGGCAGAGGAAGAATTTGAATTTGATCATCCCACGGGAGGCCTCACAG
TTCCCTGTAGTGAAAACATCTTCACCGATCTAGCTTCCAGCTTACCAAAGAAAATTGAAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATGTCAAGCAGATTCTTCGTCGAGTAGCTTCAAATGCAGGATCTTCTTCAGTATCCAACAACATTCCAAGAGGGTACATCCCAGTCTATGTTGGAGAGGAGCAAAA
GAAGCGATATATAGTACCGATATCTTACTTGAATGAGCCATTGTTCCAAAAGTTGCTCGATAAGGCAGAGGAAGAATTTGAATTTGATCATCCCACGGGAGGCCTCACAG
TTCCCTGTAGTGAAAACATCTTCACCGATCTAGCTTCCAGCTTACCAAAGAAAATTGAAACTTGA
Protein sequenceShow/hide protein sequence
MHVKQILRRVASNAGSSSVSNNIPRGYIPVYVGEEQKKRYIVPISYLNEPLFQKLLDKAEEEFEFDHPTGGLTVPCSENIFTDLASSLPKKIET