; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS028248 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS028248
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-induced protein 15A-like
Genome locationscaffold47:1089792..1090094
RNA-Seq ExpressionMS028248
SyntenyMS028248
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588983.1 hypothetical protein SDJN03_17548, partial [Cucurbita argyrosperma subsp. sororia]5.3e-4491.67Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQS
        MGFRLPRIVHA+QSL+RSSSTGNGASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLN+PSFQDLL +AEEEFGYDHPMGGITIPCSE+TFLSLTQS
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQS

XP_022135743.1 auxin-induced protein 15A-like [Momordica charantia]1.1e-49100Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
        MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS

XP_022952257.1 auxin-induced protein 15A-like [Cucurbita moschata]1.5e-4389Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
        MGFRLPRIV  KQSL+RSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLL QAEEEFGY+HPMGGITIPCSED FL LT+SLN+S
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS

XP_022989148.1 auxin-induced protein 15A-like [Cucurbita maxima]2.4e-4492.71Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQS
        MGFRLPRIVHA+QSL+RSSSTGNGASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLN+PSFQDLL QAEEEFGYDHPMGGITIPCSE+TFLSLTQS
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQS

XP_038887254.1 auxin-induced protein 15A-like [Benincasa hispida]1.2e-4390Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
        MGFRLPRIV AKQSL+RSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLL QAEEEFGY+HPMGGITIPCSE+ FL+LTQSLN+S
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS

TrEMBL top hitse value%identityAlignment
A0A6J1C5R3 auxin-induced protein 15A-like5.3e-50100Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
        MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS

A0A6J1GJW5 auxin-induced protein 15A-like7.5e-4489Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
        MGFRLPRIV  KQSL+RSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLL QAEEEFGY+HPMGGITIPCSED FL LT+SLN+S
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS

A0A6J1GL91 auxin-induced protein X10A-like9.8e-4489Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
        MGFRLPRIV  KQSL+RSSSTGNGASPKAVDVPKGYFTVYVGE QKKRFVIPLSYLN+PSFQDLL QAEEEFGY+HPMGGITIPCSED FL LT+SLN+S
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS

A0A6J1JLL2 auxin-induced protein 15A-like7.5e-4487Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS
        MGFRLPRIVHA++SL+RSSSTGNGASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLN+PSFQDLL Q EEEFGY+HPMGGITIPCSED FL+LT+SLN S
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS

A0A6J1JPE8 auxin-induced protein 15A-like1.2e-4492.71Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQS
        MGFRLPRIVHA+QSL+RSSSTGNGASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLN+PSFQDLL QAEEEFGYDHPMGGITIPCSE+TFLSLTQS
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG72.8e-2762.24Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN
        MGFRLP        +R++ S  N AS K +D PKGY  VYVGE   KRFVIP+S+LN+P FQDLL QAEEEFGYDHPMGG+TIPCSED F  +T  L+
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN

P33079 Auxin-induced protein 10A58.0e-2762.24Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN
        MGFR+  IV      RR+S     A+ K VDVPKGY  VYVG+ + +RF IP+SYLNEPSFQ+LL QAEEEFGYDHPMGG+TIPC E+ FL++T  LN
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN

P33080 Auxin-induced protein X10A2.2e-2962.63Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNN
        MGFRLP        +R++S   N AS K+V+VPKGY  VYVG+ + +RF+IP+SYLN+PSFQDLL QAEEEFGYDHPMGG+TIPC ED FL++T  LN+
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNN

P33081 Auxin-induced protein 15A1.0e-2663.27Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN
        MGFRLP        +R++S        KA D PKGY  VYVGE + KRFVIP+SYLN+PSFQDLL QAEEEFGYDHPMGG+TIPCSED F  +T  LN
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN

P33083 Auxin-induced protein 6B7.2e-2864.29Show/hide
Query:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN
        MGFRLP        +R++S + N AS KAVDV KGY  VYVGE + +RFVIP+SYLN+PSFQDLL QAEEEFGY HP GG+TIPCSED F  +T  LN
Subjt:  MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family3.0e-2956.57Show/hide
Query:  MGFRLPRIVH-AKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN
        M  R+PR++  +KQ LR++    + +S  ++DVPKGY  VYVGE   KRFV+P+SYL++PSFQDLL +AEEEFG+DHPMGG+TIPCSE+ F+ L    N
Subjt:  MGFRLPRIVH-AKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLN

AT5G18010.1 SAUR-like auxin-responsive protein family1.7e-2455.56Show/hide
Query:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSL
        ++ AK+ L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL++PSFQ LL ++EEEFG+ HPMGG+TIPC EDTF+++T  L
Subjt:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSL

AT5G18020.1 SAUR-like auxin-responsive protein family1.0e-2456.32Show/hide
Query:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLT
        ++ AK+ L RS++  + A       PKG+  VYVGE QKKR+++P+SYLN+PSFQ LL ++EEEFG+DHPMGG+TIPC EDTF+++T
Subjt:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLT

AT5G18050.1 SAUR-like auxin-responsive protein family1.3e-2455.56Show/hide
Query:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSL
        ++ AK+ L RS++  + A       PKG+  VYVGE QKKR+++PLSYLN+PSFQ LL ++E+EFG+DHPMGG+TIPC EDTF+++T  L
Subjt:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSL

AT5G18080.1 SAUR-like auxin-responsive protein family1.5e-2556.67Show/hide
Query:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSL
        ++ AK+ L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLN+PSFQ LL ++EEEFG+DHPMGG+TIPC EDTF+++T  L
Subjt:  IVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCGTTTGCCTAGAATTGTTCATGCTAAGCAAAGTCTTCGACGATCTTCATCAACAGGAAATGGAGCTTCTCCAAAGGCTGTTGACGTTCCAAAGGGCTACTT
TACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACGAGCCCTCTTTTCAAGATTTGTTGGGTCAAGCAGAAGAAGAATTTGGAT
ATGATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACACTTTCCTCAGTCTCACGCAGAGTTTAAACAACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCCGTTTGCCTAGAATTGTTCATGCTAAGCAAAGTCTTCGACGATCTTCATCAACAGGAAATGGAGCTTCTCCAAAGGCTGTTGACGTTCCAAAGGGCTACTT
TACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACGAGCCCTCTTTTCAAGATTTGTTGGGTCAAGCAGAAGAAGAATTTGGAT
ATGATCATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACACTTTCCTCAGTCTCACGCAGAGTTTAAACAACTCATGA
Protein sequenceShow/hide protein sequence
MGFRLPRIVHAKQSLRRSSSTGNGASPKAVDVPKGYFTVYVGEVQKKRFVIPLSYLNEPSFQDLLGQAEEEFGYDHPMGGITIPCSEDTFLSLTQSLNNS